FFCP PHASE1:Mm9::chr13:23871151..23871163,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2831|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:23871151..23871163,+|id=chr13:23871151..23871163,+|ontology_enrichment_celltype=CL:0002563!1.65e-24!9;CL:0002251!1.65e-24!9;CL:0000239!1.87e-17!6;CL:0000677!1.87e-17!6;CL:0000212!1.87e-17!6;CL:0000584!1.87e-17!6;CL:0000075!7.23e-15!7;CL:0000066!2.75e-14!25;CL:0002076!4.54e-14!15;CL:0000223!3.74e-10!20;CL:0000473!2.06e-09!3;CL:0000627!2.06e-09!3;CL:0000682!2.06e-09!3;CL:0002250!1.23e-08!3|ontology_enrichment_celltype_v019_2=CL:0000239,5.09e-26,6;CL:0000677,5.09e-26,6;CL:0000584,5.09e-26,6;CL:0000075,2.96e-22,7;CL:0002563,3.16e-17,9;CL:0002251,3.16e-17,9;CL:0000682,1.23e-13,3;CL:0000066,5.64e-13,25;CL:0002076,3.65e-10,15;CL:0000223,1.67e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.55e-40!15;UBERON:0001242!1.82e-34!13;UBERON:0000060!1.82e-34!13;UBERON:0001262!1.82e-34!13;UBERON:0004786!1.82e-34!13;UBERON:0000160!3.07e-28!43;UBERON:0003350!1.65e-24!9;UBERON:0004808!1.65e-24!9;UBERON:0001277!1.65e-24!9;UBERON:0004923!1.00e-23!24;UBERON:0005409!3.34e-23!59;UBERON:0000485!9.14e-20!11;UBERON:0001007!5.23e-11!128;UBERON:0001555!5.23e-11!128;UBERON:0007026!5.23e-11!128;UBERON:0004119!9.40e-11!130;UBERON:0000925!9.40e-11!130;UBERON:0006595!9.40e-11!130;UBERON:0004921!4.51e-09!126;UBERON:0004185!4.51e-09!126;UBERON:0000331!1.89e-08!3;UBERON:0002116!1.89e-08!3;UBERON:0001204!1.89e-08!3;UBERON:0001168!1.89e-08!3;UBERON:0001962!7.07e-07!2;UBERON:0001961!7.07e-07!2;UBERON:0001744!7.07e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.04e-30,31;UBERON:0000344,6.42e-28,15;UBERON:0001242,8.99e-21,13;UBERON:0001262,8.99e-21,13;UBERON:0004786,8.99e-21,13;UBERON:0005409,2.90e-19,47;UBERON:0003350,3.16e-17,9;UBERON:0004808,3.16e-17,9;UBERON:0001277,3.16e-17,9;UBERON:0004923,6.47e-17,24;UBERON:0000485,5.07e-14,11;UBERON:0001962,9.54e-10,2;UBERON:0001961,9.54e-10,2;UBERON:0001744,9.54e-10,2;UBERON:0001007,1.41e-08,116;UBERON:0001555,1.41e-08,116;UBERON:0007026,1.41e-08,116;UBERON:0004119,2.20e-08,118;UBERON:0000925,2.20e-08,118;UBERON:0006595,2.20e-08,118;UBERON:0002465,8.98e-07,3|phase1_expression=0,3.83872948403297,7.73498706962211,14.8207463540347,6.51164448930251,2.18243053485457,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43974237497583,6.19405058881359,4.59385571292016,8.61523992318149,2.15471232685889,0.190023419456374,1.51218077855958,0.221730510655305,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2619386500124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8426142811251,9.25576983322405,0,0,0,0.201683524623343,0,0,9.49058123089023,0,0.251335208800269,0,0,6.29173586057955,19.4524244887225,15.5330193138406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:23871151..23871163,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2831 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:23871151..23871163,+ | |||
|description=CAGE_peak_at_chr13:23871151..23871163,+ | |||
|id=chr13:23871151..23871163,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.65e-24!9;CL:0002251!1.65e-24!9;CL:0000239!1.87e-17!6;CL:0000677!1.87e-17!6;CL:0000212!1.87e-17!6;CL:0000584!1.87e-17!6;CL:0000075!7.23e-15!7;CL:0000066!2.75e-14!25;CL:0002076!4.54e-14!15;CL:0000223!3.74e-10!20;CL:0000473!2.06e-09!3;CL:0000627!2.06e-09!3;CL:0000682!2.06e-09!3;CL:0002250!1.23e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.09e-26,6;CL:0000677,5.09e-26,6;CL:0000584,5.09e-26,6;CL:0000075,2.96e-22,7;CL:0002563,3.16e-17,9;CL:0002251,3.16e-17,9;CL:0000682,1.23e-13,3;CL:0000066,5.64e-13,25;CL:0002076,3.65e-10,15;CL:0000223,1.67e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.55e-40!15;UBERON:0001242!1.82e-34!13;UBERON:0000060!1.82e-34!13;UBERON:0001262!1.82e-34!13;UBERON:0004786!1.82e-34!13;UBERON:0000160!3.07e-28!43;UBERON:0003350!1.65e-24!9;UBERON:0004808!1.65e-24!9;UBERON:0001277!1.65e-24!9;UBERON:0004923!1.00e-23!24;UBERON:0005409!3.34e-23!59;UBERON:0000485!9.14e-20!11;UBERON:0001007!5.23e-11!128;UBERON:0001555!5.23e-11!128;UBERON:0007026!5.23e-11!128;UBERON:0004119!9.40e-11!130;UBERON:0000925!9.40e-11!130;UBERON:0006595!9.40e-11!130;UBERON:0004921!4.51e-09!126;UBERON:0004185!4.51e-09!126;UBERON:0000331!1.89e-08!3;UBERON:0002116!1.89e-08!3;UBERON:0001204!1.89e-08!3;UBERON:0001168!1.89e-08!3;UBERON:0001962!7.07e-07!2;UBERON:0001961!7.07e-07!2;UBERON:0001744!7.07e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.04e-30,31;UBERON:0000344,6.42e-28,15;UBERON:0001242,8.99e-21,13;UBERON:0001262,8.99e-21,13;UBERON:0004786,8.99e-21,13;UBERON:0005409,2.90e-19,47;UBERON:0003350,3.16e-17,9;UBERON:0004808,3.16e-17,9;UBERON:0001277,3.16e-17,9;UBERON:0004923,6.47e-17,24;UBERON:0000485,5.07e-14,11;UBERON:0001962,9.54e-10,2;UBERON:0001961,9.54e-10,2;UBERON:0001744,9.54e-10,2;UBERON:0001007,1.41e-08,116;UBERON:0001555,1.41e-08,116;UBERON:0007026,1.41e-08,116;UBERON:0004119,2.20e-08,118;UBERON:0000925,2.20e-08,118;UBERON:0006595,2.20e-08,118;UBERON:0002465,8.98e-07,3 | |||
|phase1_expression=0,3.83872948403297,7.73498706962211,14.8207463540347,6.51164448930251,2.18243053485457,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43974237497583,6.19405058881359,4.59385571292016,8.61523992318149,2.15471232685889,0.190023419456374,1.51218077855958,0.221730510655305,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2619386500124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8426142811251,9.25576983322405,0,0,0,0.201683524623343,0,0,9.49058123089023,0,0.251335208800269,0,0,6.29173586057955,19.4524244887225,15.5330193138406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:23871151..23871163,+ | |||
}} |
Latest revision as of 19:37, 5 August 2015
Short description: | p@chr13:23871151..23871163, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:23871151..23871163, + |
Coexpression cluster: | MCL_coexpression_mm9:2831 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.09e-26 | 6 |
gut absorptive cell | 5.09e-26 | 6 |
enterocyte | 5.09e-26 | 6 |
columnar/cuboidal epithelial cell | 2.96e-22 | 7 |
intestinal epithelial cell | 3.16e-17 | 9 |
epithelial cell of alimentary canal | 3.16e-17 | 9 |
M cell of gut | 1.23e-13 | 3 |
epithelial cell | 5.64e-13 | 25 |
endo-epithelial cell | 3.65e-10 | 15 |
endodermal cell | 1.67e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.04e-30 | 31 |
mucosa | 6.42e-28 | 15 |
intestinal mucosa | 8.99e-21 | 13 |
wall of intestine | 8.99e-21 | 13 |
gastrointestinal system mucosa | 8.99e-21 | 13 |
gastrointestinal system | 2.90e-19 | 47 |
epithelium of mucosa | 3.16e-17 | 9 |
gastrointestinal system epithelium | 3.16e-17 | 9 |
intestinal epithelium | 3.16e-17 | 9 |
organ component layer | 6.47e-17 | 24 |
simple columnar epithelium | 5.07e-14 | 11 |
gut-associated lymphoid tissue | 9.54e-10 | 2 |
mucosa-associated lymphoid tissue | 9.54e-10 | 2 |
lymphoid tissue | 9.54e-10 | 2 |
digestive system | 1.41e-08 | 116 |
digestive tract | 1.41e-08 | 116 |
primitive gut | 1.41e-08 | 116 |
endoderm-derived structure | 2.20e-08 | 118 |
endoderm | 2.20e-08 | 118 |
presumptive endoderm | 2.20e-08 | 118 |
lymphoid system | 8.98e-07 | 3 |