FFCP PHASE1:Mm9::chr4:83132295..83132306,-: Difference between revisions
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{{FFCP|EntrezGene=101739|HGNC=|MCL_coexpression_id=0|UniProt=Q99JF8|association_with_transcript=-1bp_to_NM_133948,uc008tkw.1,uc008tkx.1_5end|description=CAGE_peak_5_at_Psip1_5end|id=chr4:83132295..83132306,-|ontology_enrichment_celltype=CL:0000540!4.52e-11!33;CL:0000047!4.52e-11!33;CL:0000031!4.52e-11!33;CL:0000404!4.52e-11!33;CL:0000117!8.38e-11!23;CL:0000337!8.38e-11!23;CL:0000393!1.42e-09!39;CL:0000211!1.42e-09!39;CL:0000221!8.51e-08!44;CL:0000133!8.51e-08!44;CL:0002319!1.70e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-21,23;CL:0000337,1.38e-21,23;CL:0000540,9.70e-18,33;CL:0000047,9.70e-18,33;CL:0000031,9.70e-18,33;CL:0000404,9.70e-18,33;CL:0000393,6.02e-14,39;CL:0000211,6.02e-14,39;CL:0002319,5.03e-12,43;CL:0000221,1.33e-11,44;CL:0000133,1.33e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.83e-18!73;UBERON:0005743!3.83e-18!73;UBERON:0000073!3.85e-18!75;UBERON:0001016!3.85e-18!75;UBERON:0002346!1.14e-16!71;UBERON:0003075!1.14e-16!71;UBERON:0007284!1.14e-16!71;UBERON:0003056!4.83e-15!49;UBERON:0000033!5.42e-15!63;UBERON:0001049!5.50e-15!52;UBERON:0005068!5.50e-15!52;UBERON:0006241!5.50e-15!52;UBERON:0007135!5.50e-15!52;UBERON:0004121!6.10e-15!102;UBERON:0000924!6.10e-15!102;UBERON:0006601!6.10e-15!102;UBERON:0007811!7.25e-15!86;UBERON:0002020!1.16e-14!34;UBERON:0000153!9.16e-14!94;UBERON:0000955!1.50e-13!50;UBERON:0006238!1.50e-13!50;UBERON:0002616!2.16e-13!49;UBERON:0003080!5.92e-12!40;UBERON:0002791!8.25e-12!29;UBERON:0003528!8.25e-12!29;UBERON:0001893!8.25e-12!29;UBERON:0002780!1.72e-11!39;UBERON:0001890!1.72e-11!39;UBERON:0006240!1.72e-11!39;UBERON:0000956!1.92e-07!21;UBERON:0001869!1.92e-07!21;UBERON:0000203!1.92e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.17e-34,64;UBERON:0003075,5.17e-34,64;UBERON:0007284,5.17e-34,64;UBERON:0002020,2.88e-31,34;UBERON:0000073,1.32e-29,54;UBERON:0001017,1.71e-28,73;UBERON:0010371,3.22e-28,73;UBERON:0004121,1.01e-27,95;UBERON:0000924,1.01e-27,95;UBERON:0006601,1.01e-27,95;UBERON:0001016,2.18e-27,75;UBERON:0001049,4.29e-27,52;UBERON:0005068,4.29e-27,52;UBERON:0006241,4.29e-27,52;UBERON:0007135,4.29e-27,52;UBERON:0003056,2.79e-26,49;UBERON:0003528,5.59e-25,29;UBERON:0002791,5.59e-25,29;UBERON:0001893,5.59e-25,29;UBERON:0003080,5.62e-21,40;UBERON:0002616,2.40e-20,46;UBERON:0002780,5.24e-20,39;UBERON:0001890,5.24e-20,39;UBERON:0006240,5.24e-20,39;UBERON:0010314,9.48e-20,92;UBERON:0000955,1.01e-19,47;UBERON:0006238,1.01e-19,47;UBERON:0000956,2.40e-15,21;UBERON:0001869,2.40e-15,21;UBERON:0000203,2.40e-15,21;UBERON:0002619,3.60e-13,17;UBERON:0002021,1.60e-12,10;UBERON:0000411,1.60e-12,10;UBERON:0001950,1.60e-12,10;UBERON:0002420,3.85e-11,8;UBERON:0007245,3.85e-11,8;UBERON:0010009,3.85e-11,8;UBERON:0010011,3.85e-11,8;UBERON:0000454,3.85e-11,8;UBERON:0002240,1.32e-08,6;UBERON:0005174,1.32e-08,6;UBERON:0001137,1.32e-08,6;UBERON:0000369,1.19e-07,5;UBERON:0002435,1.19e-07,5;UBERON:0000204,1.19e-07,5;UBERON:0010082,1.19e-07,5;UBERON:0001948,1.74e-07,5;UBERON:0002315,1.74e-07,5;UBERON:0000025,1.77e-07,114|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0.503637815735669,0,1.42035655785734,0.985521055061667,2.34064526321993,0.513653904676515,0.239316476986009,0,0.961624426608971,0.333109761815663,0.607425802169478,0,0.473193248037357,0,0,11.6509307506966,0.695036658406197,0.261199789138935,0.47997726838022,0.68822784320151,0,0.430761996159075,0,0.190023419456374,0.252030129759931,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,0,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,0.629484089877886,0.101376931219515,0.550640256485045,0,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0,0.672187598284928,0,0.286533439938757,0.515672092277442,1.21389876515759,2.11596391708813,1.26766280701236,0,0,0.449949858640699,0,0,0.898800331555214,0.384218305321555,1.65903379693564,1.89008313664367,0.630974884054146,1.71390590642282,1.98781686856452,2.57230678351403,1.0543001812006,0,3.30347642998166,2.55374676170375,3.37934373163736,2.50583946687368,2.19570344645783,3.12548022334056,3.07101298901519,2.25105044012672,3.0559649555362,5.00868595305235,3.27454865837937,3.72798891650601,0.227178579999552,0.755715601067855,0.579728977403356,0,0,0,0,0,1.40444420131752,0.511290967734173,0.259786004602869,0,0.985903938436763,0,0,0,0.216491041011214,0.253359865475099,0,3.53970027129086,0.258937883647172,0.148442139064825,0.520455980298408,0.304465478312141,0,0.60289056221049,0,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0.479260498023681,0.599902730993408,0.508280908292259,2.09706895166752,4.11750542536764,3.5183218591602,3.99795936442236,3.83573185995496,2.49345653471472,2.75810147215188,0.611036183101898,0.746441823660558,0.252722758433675,0.210441855886474,1.04096354370163,1.37941262660084,1.62055916824814,2.86339153887859,2.9255694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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:101739 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99JF8 | |||
|association_with_transcript=-1bp_to_NM_133948,uc008tkw.1,uc008tkx.1_5end | |||
|cluster_id=chr4:83132295..83132306,- | |||
|description=CAGE_peak_5_at_Psip1_5end | |||
|id=chr4:83132295..83132306,- | |||
|ontology_enrichment_celltype=CL:0000540!4.52e-11!33;CL:0000047!4.52e-11!33;CL:0000031!4.52e-11!33;CL:0000404!4.52e-11!33;CL:0000117!8.38e-11!23;CL:0000337!8.38e-11!23;CL:0000393!1.42e-09!39;CL:0000211!1.42e-09!39;CL:0000221!8.51e-08!44;CL:0000133!8.51e-08!44;CL:0002319!1.70e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-21,23;CL:0000337,1.38e-21,23;CL:0000540,9.70e-18,33;CL:0000047,9.70e-18,33;CL:0000031,9.70e-18,33;CL:0000404,9.70e-18,33;CL:0000393,6.02e-14,39;CL:0000211,6.02e-14,39;CL:0002319,5.03e-12,43;CL:0000221,1.33e-11,44;CL:0000133,1.33e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.83e-18!73;UBERON:0005743!3.83e-18!73;UBERON:0000073!3.85e-18!75;UBERON:0001016!3.85e-18!75;UBERON:0002346!1.14e-16!71;UBERON:0003075!1.14e-16!71;UBERON:0007284!1.14e-16!71;UBERON:0003056!4.83e-15!49;UBERON:0000033!5.42e-15!63;UBERON:0001049!5.50e-15!52;UBERON:0005068!5.50e-15!52;UBERON:0006241!5.50e-15!52;UBERON:0007135!5.50e-15!52;UBERON:0004121!6.10e-15!102;UBERON:0000924!6.10e-15!102;UBERON:0006601!6.10e-15!102;UBERON:0007811!7.25e-15!86;UBERON:0002020!1.16e-14!34;UBERON:0000153!9.16e-14!94;UBERON:0000955!1.50e-13!50;UBERON:0006238!1.50e-13!50;UBERON:0002616!2.16e-13!49;UBERON:0003080!5.92e-12!40;UBERON:0002791!8.25e-12!29;UBERON:0003528!8.25e-12!29;UBERON:0001893!8.25e-12!29;UBERON:0002780!1.72e-11!39;UBERON:0001890!1.72e-11!39;UBERON:0006240!1.72e-11!39;UBERON:0000956!1.92e-07!21;UBERON:0001869!1.92e-07!21;UBERON:0000203!1.92e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.17e-34,64;UBERON:0003075,5.17e-34,64;UBERON:0007284,5.17e-34,64;UBERON:0002020,2.88e-31,34;UBERON:0000073,1.32e-29,54;UBERON:0001017,1.71e-28,73;UBERON:0010371,3.22e-28,73;UBERON:0004121,1.01e-27,95;UBERON:0000924,1.01e-27,95;UBERON:0006601,1.01e-27,95;UBERON:0001016,2.18e-27,75;UBERON:0001049,4.29e-27,52;UBERON:0005068,4.29e-27,52;UBERON:0006241,4.29e-27,52;UBERON:0007135,4.29e-27,52;UBERON:0003056,2.79e-26,49;UBERON:0003528,5.59e-25,29;UBERON:0002791,5.59e-25,29;UBERON:0001893,5.59e-25,29;UBERON:0003080,5.62e-21,40;UBERON:0002616,2.40e-20,46;UBERON:0002780,5.24e-20,39;UBERON:0001890,5.24e-20,39;UBERON:0006240,5.24e-20,39;UBERON:0010314,9.48e-20,92;UBERON:0000955,1.01e-19,47;UBERON:0006238,1.01e-19,47;UBERON:0000956,2.40e-15,21;UBERON:0001869,2.40e-15,21;UBERON:0000203,2.40e-15,21;UBERON:0002619,3.60e-13,17;UBERON:0002021,1.60e-12,10;UBERON:0000411,1.60e-12,10;UBERON:0001950,1.60e-12,10;UBERON:0002420,3.85e-11,8;UBERON:0007245,3.85e-11,8;UBERON:0010009,3.85e-11,8;UBERON:0010011,3.85e-11,8;UBERON:0000454,3.85e-11,8;UBERON:0002240,1.32e-08,6;UBERON:0005174,1.32e-08,6;UBERON:0001137,1.32e-08,6;UBERON:0000369,1.19e-07,5;UBERON:0002435,1.19e-07,5;UBERON:0000204,1.19e-07,5;UBERON:0010082,1.19e-07,5;UBERON:0001948,1.74e-07,5;UBERON:0002315,1.74e-07,5;UBERON:0000025,1.77e-07,114 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0.503637815735669,0,1.42035655785734,0.985521055061667,2.34064526321993,0.513653904676515,0.239316476986009,0,0.961624426608971,0.333109761815663,0.607425802169478,0,0.473193248037357,0,0,11.6509307506966,0.695036658406197,0.261199789138935,0.47997726838022,0.68822784320151,0,0.430761996159075,0,0.190023419456374,0.252030129759931,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,0,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,0.629484089877886,0.101376931219515,0.550640256485045,0,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0,0.672187598284928,0,0.286533439938757,0.515672092277442,1.21389876515759,2.11596391708813,1.26766280701236,0,0,0.449949858640699,0,0,0.898800331555214,0.384218305321555,1.65903379693564,1.89008313664367,0.630974884054146,1.71390590642282,1.98781686856452,2.57230678351403,1.0543001812006,0,3.30347642998166,2.55374676170375,3.37934373163736,2.50583946687368,2.19570344645783,3.12548022334056,3.07101298901519,2.25105044012672,3.0559649555362,5.00868595305235,3.27454865837937,3.72798891650601,0.227178579999552,0.755715601067855,0.579728977403356,0,0,0,0,0,1.40444420131752,0.511290967734173,0.259786004602869,0,0.985903938436763,0,0,0,0.216491041011214,0.253359865475099,0,3.53970027129086,0.258937883647172,0.148442139064825,0.520455980298408,0.304465478312141,0,0.60289056221049,0,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0.479260498023681,0.599902730993408,0.508280908292259,2.09706895166752,4.11750542536764,3.5183218591602,3.99795936442236,3.83573185995496,2.49345653471472,2.75810147215188,0.611036183101898,0.746441823660558,0.252722758433675,0.210441855886474,1.04096354370163,1.37941262660084,1.62055916824814,2.86339153887859,2.9255694635071,2.43416068541215,1.78033276663485,0.776110112217047,0.215567992932842,0.567318240503458,0.527853372491847,0.219195732427575,0.278047249225598,0,0.411564272815887,0.59710280045548,0,0.772043721344145,0,0,0.703578179943289,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,3.57492912559016,2.88132914661996,0,0,0.426576501070468,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.140271639780637,0.379419222745544,0,0,0.123397163921801,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,1.50791283939272,0,0,0,2.24770825982909,3.04750385139728,0.327869890753351,0,1.26203287766503,0.390438744296638,2.36965737506079,0.716906393857656,0.668396022247182,0,0.809621403349789,1.75353514746787,0.790575555893047,0.642642632843614,0.567760340833074,0,0.651547837414304,0.164970122972535,0,0.971122544619926,0,0.377210159511796,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.646793418913773,0.857348140126369,0.532020700926821,0,0,0.913394847343798,0,0.21183207086382,0.220528398054962,0.16488625294148,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,0,2.59595422814714,0.341741761595705,0,0.740778109478847,0.941842285023455,0.136694227721025,0.228778173206523,0.169978429993855,0.839708713941948,0.138199973804424,0,0,0,0.324016022465404,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,36.0763480757882,1.19613236835183,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.58678619322877,0.651021924219751,0.629156066554265,17.3940566994724,14.1134703066354,0,0.608175645870493,0.513554785824136,0.25984164595559,1.07416017400489,0.79472541912506,0.721172697119813,0.738447635872886,0.908698049533329,0.609654453239999,0.806609481094724,0.292373642219257,0.962118416403295,0.584384510907845,0,0.887943813496259,1.43542170575161,0.671538465456314,0,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,3.3885110557024,1.38097570952153,1.14579102687879,2.92150409984269,1.37016503954128,3.0215755895588,5.40018000185445,3.60256962579376,1.81256963593682,3.62432218226274,1.97195960409936,0.798049746802062,0.682934423016537,0.729320151204882,0.628839487883947,1.2869045591501,0.222246727801615,0.618105171716683,0.320919209591815,0.758091635291392,0,0.188626341386076,0.561849044819294,0.768301828858431,0.574354689556133,0,0.463537303779422,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0.581385666529314,0.282328141245992,0.592302255241736,0.182927972872773,0.52613942287568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| |||
|short_description=p5@Psip1 | |||
}} |
Revision as of 18:37, 5 August 2015
Short description: | p5@Psip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Psip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -1bp_to_NM_133948, uc008tkw.1, uc008tkx.1_5end |
EntrezGene: | 101739 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.38e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-21 | 23 |
neuron | 9.70e-18 | 33 |
neuronal stem cell | 9.70e-18 | 33 |
neuroblast | 9.70e-18 | 33 |
electrically signaling cell | 9.70e-18 | 33 |
electrically responsive cell | 6.02e-14 | 39 |
electrically active cell | 6.02e-14 | 39 |
neural cell | 5.03e-12 | 43 |
ectodermal cell | 1.33e-11 | 44 |
neurectodermal cell | 1.33e-11 | 44 |