FFCP PHASE1:Mm9::chr7:88259702..88259733,+: Difference between revisions
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{{FFCP|EntrezGene=434203|HGNC=|MCL_coexpression_id=12|UniProt=E9PXX9|association_with_transcript=-2bp_to_ENSMUST00000119083_5end|description=CAGE_peak_1_at_Slc28a1_5end|id=chr7:88259702..88259733,+|ontology_enrichment_celltype=CL:0000239!1.56e-08!6;CL:0000677!1.56e-08!6;CL:0000212!1.56e-08!6;CL:0000584!1.56e-08!6;CL:0002563!1.87e-08!9;CL:0002251!1.87e-08!9;CL:0000075!4.24e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,1.32e-17,6;CL:0000677,1.32e-17,6;CL:0000584,1.32e-17,6;CL:0000075,5.44e-15,7;CL:0002563,1.69e-11,9;CL:0002251,1.69e-11,9;CL:0000682,1.56e-09,3;CL:0000066,4.08e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.86e-15!43;UBERON:0000344!8.87e-15!15;UBERON:0004923!6.78e-13!24;UBERON:0001242!1.71e-12!13;UBERON:0000060!1.71e-12!13;UBERON:0001262!1.71e-12!13;UBERON:0004786!1.71e-12!13;UBERON:0005409!7.02e-11!59;UBERON:0003350!1.87e-08!9;UBERON:0004808!1.87e-08!9;UBERON:0001277!1.87e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.51e-26,31;UBERON:0000344,1.37e-21,15;UBERON:0001242,9.22e-17,13;UBERON:0001262,9.22e-17,13;UBERON:0004786,9.22e-17,13;UBERON:0005409,7.02e-16,47;UBERON:0004923,6.58e-15,24;UBERON:0003350,1.69e-11,9;UBERON:0004808,1.69e-11,9;UBERON:0001277,1.69e-11,9;UBERON:0000485,2.83e-09,11;UBERON:0001962,7.62e-07,2;UBERON:0001961,7.62e-07,2;UBERON:0001744,7.62e-07,2|phase1_expression=0,48.8565570695106,49.1399178540699,32.061206398524,47.0841986149566,7.21880869221126,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,21.7589694999033,23.3997466688513,33.8796858827862,27.5687677541808,14.6520438226405,1.52018735565099,5.04060259519861,0.886922042621219,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,32.6985030666997,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0,84.2567896608685,20.3626936330929,0,0.232236671860439,0.77320476793256,3.63030344322017,2.89091456998331,0.570676878337677,17.0830462156024,0.329397909448022,0.251335208800269,0,0.19496408711912,16.178749355776,16.6426298403515,25.8883655230677,0.189667900953082,0.114248512609729,0,0,1.16371492300575,0.49095073923223,2.65593455921881,3.24742325555125,5.33795674660674,6.91024117962083,0,0,0.196558995113203,0.224862112384854,0.608580364165509,0.241177159752417,0,1.43848068725405,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.938686832254841,0.42366414172764,0,0,0,0,0,0.164140899745061,3.49777003955821,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0,0|short_description=p1@Slc28a1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:434203 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PXX9 | |||
|association_with_transcript=-2bp_to_ENSMUST00000119083_5end | |||
|cluster_id=chr7:88259702..88259733,+ | |||
|description=CAGE_peak_1_at_Slc28a1_5end | |||
|id=chr7:88259702..88259733,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.56e-08!6;CL:0000677!1.56e-08!6;CL:0000212!1.56e-08!6;CL:0000584!1.56e-08!6;CL:0002563!1.87e-08!9;CL:0002251!1.87e-08!9;CL:0000075!4.24e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.32e-17,6;CL:0000677,1.32e-17,6;CL:0000584,1.32e-17,6;CL:0000075,5.44e-15,7;CL:0002563,1.69e-11,9;CL:0002251,1.69e-11,9;CL:0000682,1.56e-09,3;CL:0000066,4.08e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.86e-15!43;UBERON:0000344!8.87e-15!15;UBERON:0004923!6.78e-13!24;UBERON:0001242!1.71e-12!13;UBERON:0000060!1.71e-12!13;UBERON:0001262!1.71e-12!13;UBERON:0004786!1.71e-12!13;UBERON:0005409!7.02e-11!59;UBERON:0003350!1.87e-08!9;UBERON:0004808!1.87e-08!9;UBERON:0001277!1.87e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.51e-26,31;UBERON:0000344,1.37e-21,15;UBERON:0001242,9.22e-17,13;UBERON:0001262,9.22e-17,13;UBERON:0004786,9.22e-17,13;UBERON:0005409,7.02e-16,47;UBERON:0004923,6.58e-15,24;UBERON:0003350,1.69e-11,9;UBERON:0004808,1.69e-11,9;UBERON:0001277,1.69e-11,9;UBERON:0000485,2.83e-09,11;UBERON:0001962,7.62e-07,2;UBERON:0001961,7.62e-07,2;UBERON:0001744,7.62e-07,2 | |||
|phase1_expression=0,48.8565570695106,49.1399178540699,32.061206398524,47.0841986149566,7.21880869221126,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,21.7589694999033,23.3997466688513,33.8796858827862,27.5687677541808,14.6520438226405,1.52018735565099,5.04060259519861,0.886922042621219,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,32.6985030666997,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0,84.2567896608685,20.3626936330929,0,0.232236671860439,0.77320476793256,3.63030344322017,2.89091456998331,0.570676878337677,17.0830462156024,0.329397909448022,0.251335208800269,0,0.19496408711912,16.178749355776,16.6426298403515,25.8883655230677,0.189667900953082,0.114248512609729,0,0,1.16371492300575,0.49095073923223,2.65593455921881,3.24742325555125,5.33795674660674,6.91024117962083,0,0,0.196558995113203,0.224862112384854,0.608580364165509,0.241177159752417,0,1.43848068725405,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.938686832254841,0.42366414172764,0,0,0,0,0,0.164140899745061,3.49777003955821,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p1@Slc28a1 | |||
}} |
Revision as of 16:14, 5 August 2015
Short description: | p1@Slc28a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc28a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -2bp_to_ENSMUST00000119083_5end |
EntrezGene: | 434203 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.32e-17 | 6 |
gut absorptive cell | 1.32e-17 | 6 |
enterocyte | 1.32e-17 | 6 |
columnar/cuboidal epithelial cell | 5.44e-15 | 7 |
intestinal epithelial cell | 1.69e-11 | 9 |
epithelial cell of alimentary canal | 1.69e-11 | 9 |
M cell of gut | 1.56e-09 | 3 |
epithelial cell | 4.08e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.51e-26 | 31 |
mucosa | 1.37e-21 | 15 |
intestinal mucosa | 9.22e-17 | 13 |
wall of intestine | 9.22e-17 | 13 |
gastrointestinal system mucosa | 9.22e-17 | 13 |
gastrointestinal system | 7.02e-16 | 47 |
organ component layer | 6.58e-15 | 24 |
epithelium of mucosa | 1.69e-11 | 9 |
gastrointestinal system epithelium | 1.69e-11 | 9 |
intestinal epithelium | 1.69e-11 | 9 |
simple columnar epithelium | 2.83e-09 | 11 |
gut-associated lymphoid tissue | 7.62e-07 | 2 |
mucosa-associated lymphoid tissue | 7.62e-07 | 2 |
lymphoid tissue | 7.62e-07 | 2 |