FFCP PHASE1:Mm9::chr13:115593529..115593542,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=24|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:115593529..115593542,+|id=chr13:115593529..115593542,+|ontology_enrichment_celltype=CL:0002563!3.95e-20!9;CL:0002251!3.95e-20!9;CL:0000239!2.08e-14!6;CL:0000677!2.08e-14!6;CL:0000212!2.08e-14!6;CL:0000584!2.08e-14!6;CL:0000075!3.12e-12!7;CL:0002076!2.42e-11!15;CL:0000066!2.77e-11!25;CL:0000223!4.63e-08!20;CL:0000473!6.26e-08!3;CL:0000627!6.26e-08!3;CL:0000682!6.26e-08!3;CL:0002250!2.65e-07!3|ontology_enrichment_celltype_v019_2=CL:0002563,1.13e-20,9;CL:0002251,1.13e-20,9;CL:0000066,4.38e-14,25;CL:0000682,2.76e-12,3;CL:0002076,4.36e-12,15;CL:0000239,1.59e-11,6;CL:0000677,1.59e-11,6;CL:0000584,1.59e-11,6;CL:0002250,3.11e-11,3;CL:0000075,6.90e-10,7;CL:0000223,7.37e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.94e-33!15;UBERON:0001242!6.07e-29!13;UBERON:0000060!6.07e-29!13;UBERON:0001262!6.07e-29!13;UBERON:0004786!6.07e-29!13;UBERON:0000160!9.05e-29!43;UBERON:0005409!8.03e-23!59;UBERON:0003350!3.95e-20!9;UBERON:0004808!3.95e-20!9;UBERON:0001277!3.95e-20!9;UBERON:0004923!3.16e-19!24;UBERON:0000485!3.91e-16!11;UBERON:0001007!2.17e-12!128;UBERON:0001555!2.17e-12!128;UBERON:0007026!2.17e-12!128;UBERON:0004119!4.40e-12!130;UBERON:0000925!4.40e-12!130;UBERON:0006595!4.40e-12!130;UBERON:0004921!1.35e-10!126;UBERON:0004185!1.35e-10!126;UBERON:0000331!5.94e-08!3;UBERON:0002116!5.94e-08!3;UBERON:0001204!5.94e-08!3;UBERON:0001168!5.94e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.06e-41,15;UBERON:0000160,3.42e-38,31;UBERON:0001242,6.37e-35,13;UBERON:0001262,6.37e-35,13;UBERON:0004786,6.37e-35,13;UBERON:0004923,3.13e-25,24;UBERON:0005409,3.78e-24,47;UBERON:0003350,1.13e-20,9;UBERON:0004808,1.13e-20,9;UBERON:0001277,1.13e-20,9;UBERON:0000485,8.96e-17,11;UBERON:0002108,6.86e-16,4;UBERON:0000331,2.53e-12,3;UBERON:0002116,2.53e-12,3;UBERON:0001204,2.53e-12,3;UBERON:0001168,2.53e-12,3;UBERON:0001007,3.48e-10,116;UBERON:0001555,3.48e-10,116;UBERON:0007026,3.48e-10,116;UBERON:0004119,5.94e-10,118;UBERON:0000925,5.94e-10,118;UBERON:0006595,5.94e-10,118;UBERON:0001962,2.71e-08,2;UBERON:0001961,2.71e-08,2;UBERON:0001744,2.71e-08,2;UBERON:0004921,4.58e-08,114|phase1_expression=0,11.1672130444596,5.91499011206397,11.1911758183527,10.0179145989269,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.37645568640302,5.16808767703518,5.59990595006797,4.30942465371778,5.89072600314759,6.04872311423834,1.55211357458713,0,0,0,1.1554064790051,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,1.85115396664481,0,0,0,0.201683524623343,0,0.380451252225118,6.16887780007865,0.164698954724011,0,0.397912944082302,0.58489226135736,3.59527763461689,6.48414149624083,7.16908583715722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:115593529..115593542,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:115593529..115593542,+ | |||
|description=CAGE_peak_at_chr13:115593529..115593542,+ | |||
|id=chr13:115593529..115593542,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.95e-20!9;CL:0002251!3.95e-20!9;CL:0000239!2.08e-14!6;CL:0000677!2.08e-14!6;CL:0000212!2.08e-14!6;CL:0000584!2.08e-14!6;CL:0000075!3.12e-12!7;CL:0002076!2.42e-11!15;CL:0000066!2.77e-11!25;CL:0000223!4.63e-08!20;CL:0000473!6.26e-08!3;CL:0000627!6.26e-08!3;CL:0000682!6.26e-08!3;CL:0002250!2.65e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.13e-20,9;CL:0002251,1.13e-20,9;CL:0000066,4.38e-14,25;CL:0000682,2.76e-12,3;CL:0002076,4.36e-12,15;CL:0000239,1.59e-11,6;CL:0000677,1.59e-11,6;CL:0000584,1.59e-11,6;CL:0002250,3.11e-11,3;CL:0000075,6.90e-10,7;CL:0000223,7.37e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.94e-33!15;UBERON:0001242!6.07e-29!13;UBERON:0000060!6.07e-29!13;UBERON:0001262!6.07e-29!13;UBERON:0004786!6.07e-29!13;UBERON:0000160!9.05e-29!43;UBERON:0005409!8.03e-23!59;UBERON:0003350!3.95e-20!9;UBERON:0004808!3.95e-20!9;UBERON:0001277!3.95e-20!9;UBERON:0004923!3.16e-19!24;UBERON:0000485!3.91e-16!11;UBERON:0001007!2.17e-12!128;UBERON:0001555!2.17e-12!128;UBERON:0007026!2.17e-12!128;UBERON:0004119!4.40e-12!130;UBERON:0000925!4.40e-12!130;UBERON:0006595!4.40e-12!130;UBERON:0004921!1.35e-10!126;UBERON:0004185!1.35e-10!126;UBERON:0000331!5.94e-08!3;UBERON:0002116!5.94e-08!3;UBERON:0001204!5.94e-08!3;UBERON:0001168!5.94e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.06e-41,15;UBERON:0000160,3.42e-38,31;UBERON:0001242,6.37e-35,13;UBERON:0001262,6.37e-35,13;UBERON:0004786,6.37e-35,13;UBERON:0004923,3.13e-25,24;UBERON:0005409,3.78e-24,47;UBERON:0003350,1.13e-20,9;UBERON:0004808,1.13e-20,9;UBERON:0001277,1.13e-20,9;UBERON:0000485,8.96e-17,11;UBERON:0002108,6.86e-16,4;UBERON:0000331,2.53e-12,3;UBERON:0002116,2.53e-12,3;UBERON:0001204,2.53e-12,3;UBERON:0001168,2.53e-12,3;UBERON:0001007,3.48e-10,116;UBERON:0001555,3.48e-10,116;UBERON:0007026,3.48e-10,116;UBERON:0004119,5.94e-10,118;UBERON:0000925,5.94e-10,118;UBERON:0006595,5.94e-10,118;UBERON:0001962,2.71e-08,2;UBERON:0001961,2.71e-08,2;UBERON:0001744,2.71e-08,2;UBERON:0004921,4.58e-08,114 | |||
|phase1_expression=0,11.1672130444596,5.91499011206397,11.1911758183527,10.0179145989269,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.37645568640302,5.16808767703518,5.59990595006797,4.30942465371778,5.89072600314759,6.04872311423834,1.55211357458713,0,0,0,1.1554064790051,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,1.85115396664481,0,0,0,0.201683524623343,0,0.380451252225118,6.16887780007865,0.164698954724011,0,0.397912944082302,0.58489226135736,3.59527763461689,6.48414149624083,7.16908583715722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:115593529..115593542,+ | |||
}} |
Latest revision as of 15:31, 5 August 2015
Short description: | p@chr13:115593529..115593542, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:115593529..115593542, + |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.13e-20 | 9 |
epithelial cell of alimentary canal | 1.13e-20 | 9 |
epithelial cell | 4.38e-14 | 25 |
M cell of gut | 2.76e-12 | 3 |
endo-epithelial cell | 4.36e-12 | 15 |
brush border epithelial cell | 1.59e-11 | 6 |
gut absorptive cell | 1.59e-11 | 6 |
enterocyte | 1.59e-11 | 6 |
intestinal crypt stem cell | 3.11e-11 | 3 |
columnar/cuboidal epithelial cell | 6.90e-10 | 7 |
endodermal cell | 7.37e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.06e-41 | 15 |
intestine | 3.42e-38 | 31 |
intestinal mucosa | 6.37e-35 | 13 |
wall of intestine | 6.37e-35 | 13 |
gastrointestinal system mucosa | 6.37e-35 | 13 |
organ component layer | 3.13e-25 | 24 |
gastrointestinal system | 3.78e-24 | 47 |
epithelium of mucosa | 1.13e-20 | 9 |
gastrointestinal system epithelium | 1.13e-20 | 9 |
intestinal epithelium | 1.13e-20 | 9 |
simple columnar epithelium | 8.96e-17 | 11 |
small intestine | 6.86e-16 | 4 |
ileal mucosa | 2.53e-12 | 3 |
ileum | 2.53e-12 | 3 |
mucosa of small intestine | 2.53e-12 | 3 |
wall of small intestine | 2.53e-12 | 3 |
digestive system | 3.48e-10 | 116 |
digestive tract | 3.48e-10 | 116 |
primitive gut | 3.48e-10 | 116 |
endoderm-derived structure | 5.94e-10 | 118 |
endoderm | 5.94e-10 | 118 |
presumptive endoderm | 5.94e-10 | 118 |
gut-associated lymphoid tissue | 2.71e-08 | 2 |
mucosa-associated lymphoid tissue | 2.71e-08 | 2 |
lymphoid tissue | 2.71e-08 | 2 |
subdivision of digestive tract | 4.58e-08 | 114 |