FFCP PHASE1:Mm9::chr13:111071094..111071114,-: Difference between revisions
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{{FFCP|EntrezGene=67295|HGNC=|MCL_coexpression_id=159|UniProt=F8WIK3|association_with_transcript=0bp_to_ENSMUST00000022210_5end|description=CAGE_peak_5_at_Rab3c_5end|id=chr13:111071094..111071114,-|ontology_enrichment_celltype=CL:0000117!2.95e-19!23;CL:0000337!2.95e-19!23;CL:0000540!1.25e-16!33;CL:0000047!1.25e-16!33;CL:0000031!1.25e-16!33;CL:0000404!1.25e-16!33;CL:0000393!2.56e-15!39;CL:0000211!2.56e-15!39;CL:0002319!1.44e-11!43;CL:0000221!4.69e-11!44;CL:0000133!4.69e-11!44;CL:0000055!1.25e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.12e-41,23;CL:0000337,6.12e-41,23;CL:0000540,2.29e-27,33;CL:0000047,2.29e-27,33;CL:0000031,2.29e-27,33;CL:0000404,2.29e-27,33;CL:0000393,1.46e-22,39;CL:0000211,1.46e-22,39;CL:0002319,4.22e-20,43;CL:0000221,1.48e-19,44;CL:0000133,1.48e-19,44;CL:0002321,7.46e-11,70;CL:0002612,1.28e-10,3;CL:0000120,1.96e-10,3;CL:0002613,3.98e-10,3;CL:0002614,6.49e-10,3;CL:0002610,7.46e-10,3;CL:0000723,1.81e-07,91;CL:0000048,1.81e-07,91;CL:0002611,6.76e-07,2;CL:0000034,8.96e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.78e-22!71;UBERON:0003075!1.78e-22!71;UBERON:0007284!1.78e-22!71;UBERON:0000073!6.97e-22!75;UBERON:0001016!6.97e-22!75;UBERON:0001017!1.87e-21!73;UBERON:0005743!1.87e-21!73;UBERON:0004121!3.80e-21!102;UBERON:0000924!3.80e-21!102;UBERON:0006601!3.80e-21!102;UBERON:0001049!9.56e-19!52;UBERON:0005068!9.56e-19!52;UBERON:0006241!9.56e-19!52;UBERON:0007135!9.56e-19!52;UBERON:0002020!8.22e-17!34;UBERON:0000955!1.27e-16!50;UBERON:0006238!1.27e-16!50;UBERON:0002616!3.14e-16!49;UBERON:0000033!9.39e-15!63;UBERON:0003056!1.32e-12!49;UBERON:0002791!1.59e-12!29;UBERON:0003528!1.59e-12!29;UBERON:0001893!1.59e-12!29;UBERON:0003080!2.16e-12!40;UBERON:0002780!1.13e-11!39;UBERON:0001890!1.13e-11!39;UBERON:0006240!1.13e-11!39;UBERON:0002420!7.76e-08!8;UBERON:0007245!7.76e-08!8;UBERON:0010009!7.76e-08!8;UBERON:0010011!7.76e-08!8;UBERON:0000454!7.76e-08!8;UBERON:0003076!1.91e-07!12;UBERON:0003057!1.91e-07!12;UBERON:0007811!5.18e-07!86;UBERON:0002240!7.66e-07!6;UBERON:0005174!7.66e-07!6;UBERON:0001137!7.66e-07!6;UBERON:0000956!7.76e-07!21;UBERON:0001869!7.76e-07!21;UBERON:0000203!7.76e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.84e-28,73;UBERON:0000073,1.02e-27,54;UBERON:0001016,5.18e-27,75;UBERON:0001049,1.06e-23,52;UBERON:0005068,1.06e-23,52;UBERON:0006241,1.06e-23,52;UBERON:0007135,1.06e-23,52;UBERON:0002020,2.48e-22,34;UBERON:0004121,3.04e-20,95;UBERON:0000924,3.04e-20,95;UBERON:0006601,3.04e-20,95;UBERON:0002240,1.95e-18,6;UBERON:0005174,1.95e-18,6;UBERON:0001137,1.95e-18,6;UBERON:0002346,2.06e-18,64;UBERON:0003075,2.06e-18,64;UBERON:0007284,2.06e-18,64;UBERON:0001948,7.12e-16,5;UBERON:0002315,7.12e-16,5;UBERON:0010371,1.39e-15,73;UBERON:0003076,1.98e-15,12;UBERON:0003057,1.98e-15,12;UBERON:0002420,1.19e-13,8;UBERON:0007245,1.19e-13,8;UBERON:0010009,1.19e-13,8;UBERON:0010011,1.19e-13,8;UBERON:0000454,1.19e-13,8;UBERON:0002616,3.25e-13,46;UBERON:0000955,7.31e-13,47;UBERON:0006238,7.31e-13,47;UBERON:0002950,1.68e-12,4;UBERON:0001891,1.68e-12,4;UBERON:0009616,1.68e-12,4;UBERON:0010286,1.68e-12,4;UBERON:0003528,1.83e-12,29;UBERON:0002791,1.83e-12,29;UBERON:0001893,1.83e-12,29;UBERON:0003080,1.09e-11,40;UBERON:0010314,1.98e-11,92;UBERON:0002257,1.28e-10,3;UBERON:0002780,2.87e-10,39;UBERON:0001890,2.87e-10,39;UBERON:0006240,2.87e-10,39;UBERON:0002038,6.49e-10,3;UBERON:0009663,6.49e-10,3;UBERON:0009661,6.49e-10,3;UBERON:0000125,6.49e-10,3;UBERON:0002308,6.49e-10,3;UBERON:0004684,7.46e-10,3;UBERON:0002275,7.46e-10,3;UBERON:0003056,5.01e-09,49;UBERON:0000025,2.38e-08,114;UBERON:0004111,1.66e-07,122;UBERON:0011216,3.51e-07,194;UBERON:0001896,6.31e-07,2;UBERON:0002298,6.31e-07,2;UBERON:0005290,6.31e-07,2;UBERON:0010096,6.31e-07,2;UBERON:0002256,6.76e-07,2|phase1_expression=0,0,0,0,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,3.03474691289397,4.23192783417626,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.210324961351382,1.14260393761521,2.42955395046775,0.61245399607477,0.191690942036473,1.83843757322004,4.40463523997555,1.0214987046815,2.30409799884365,1.97829431595291,4.11694396210843,1.56274011167028,1.11673199600552,3.93933827022176,2.44477196442896,2.94628585473668,4.27115042397309,2.79599168737951,0.075726193333184,0.151143120213571,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.705532242814229,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,1.49790639404823,0.457500602818626,0.628271760564322,1.04294592115366,0.511430914660661,1.24672826735736,0.973447578406546,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.468508622798644,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.02904612379284,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0,1.9266070798535,1.40654023910644,0.491804836130026,0,0.315508219416257,0,0.861693590931196,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0.564751842617067,1.38097570952153,0,0.68741272937475,0,0,0.675022500231806,0.45032120322422,0.453142408984205,1.55328093525546,0,0.399024873401031,0.341467211508268,0,0.628839487883947,0.551530525350042,0,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.561849044819294,0.320125762024346,0.516919220600519,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.376437521661322,0.676916863133412,0.182927972872773,0.263069711437843,0.543216455383447,1.68342681497322,0.593175090620871,0.492522411877817,1.22769312950907,0.464810523557898,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p5@Rab3c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67295 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WIK3 | |||
|association_with_transcript=0bp_to_ENSMUST00000022210_5end | |||
|cluster_id=chr13:111071094..111071114,- | |||
|description=CAGE_peak_5_at_Rab3c_5end | |||
|id=chr13:111071094..111071114,- | |||
|ontology_enrichment_celltype=CL:0000117!2.95e-19!23;CL:0000337!2.95e-19!23;CL:0000540!1.25e-16!33;CL:0000047!1.25e-16!33;CL:0000031!1.25e-16!33;CL:0000404!1.25e-16!33;CL:0000393!2.56e-15!39;CL:0000211!2.56e-15!39;CL:0002319!1.44e-11!43;CL:0000221!4.69e-11!44;CL:0000133!4.69e-11!44;CL:0000055!1.25e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.12e-41,23;CL:0000337,6.12e-41,23;CL:0000540,2.29e-27,33;CL:0000047,2.29e-27,33;CL:0000031,2.29e-27,33;CL:0000404,2.29e-27,33;CL:0000393,1.46e-22,39;CL:0000211,1.46e-22,39;CL:0002319,4.22e-20,43;CL:0000221,1.48e-19,44;CL:0000133,1.48e-19,44;CL:0002321,7.46e-11,70;CL:0002612,1.28e-10,3;CL:0000120,1.96e-10,3;CL:0002613,3.98e-10,3;CL:0002614,6.49e-10,3;CL:0002610,7.46e-10,3;CL:0000723,1.81e-07,91;CL:0000048,1.81e-07,91;CL:0002611,6.76e-07,2;CL:0000034,8.96e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.78e-22!71;UBERON:0003075!1.78e-22!71;UBERON:0007284!1.78e-22!71;UBERON:0000073!6.97e-22!75;UBERON:0001016!6.97e-22!75;UBERON:0001017!1.87e-21!73;UBERON:0005743!1.87e-21!73;UBERON:0004121!3.80e-21!102;UBERON:0000924!3.80e-21!102;UBERON:0006601!3.80e-21!102;UBERON:0001049!9.56e-19!52;UBERON:0005068!9.56e-19!52;UBERON:0006241!9.56e-19!52;UBERON:0007135!9.56e-19!52;UBERON:0002020!8.22e-17!34;UBERON:0000955!1.27e-16!50;UBERON:0006238!1.27e-16!50;UBERON:0002616!3.14e-16!49;UBERON:0000033!9.39e-15!63;UBERON:0003056!1.32e-12!49;UBERON:0002791!1.59e-12!29;UBERON:0003528!1.59e-12!29;UBERON:0001893!1.59e-12!29;UBERON:0003080!2.16e-12!40;UBERON:0002780!1.13e-11!39;UBERON:0001890!1.13e-11!39;UBERON:0006240!1.13e-11!39;UBERON:0002420!7.76e-08!8;UBERON:0007245!7.76e-08!8;UBERON:0010009!7.76e-08!8;UBERON:0010011!7.76e-08!8;UBERON:0000454!7.76e-08!8;UBERON:0003076!1.91e-07!12;UBERON:0003057!1.91e-07!12;UBERON:0007811!5.18e-07!86;UBERON:0002240!7.66e-07!6;UBERON:0005174!7.66e-07!6;UBERON:0001137!7.66e-07!6;UBERON:0000956!7.76e-07!21;UBERON:0001869!7.76e-07!21;UBERON:0000203!7.76e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.84e-28,73;UBERON:0000073,1.02e-27,54;UBERON:0001016,5.18e-27,75;UBERON:0001049,1.06e-23,52;UBERON:0005068,1.06e-23,52;UBERON:0006241,1.06e-23,52;UBERON:0007135,1.06e-23,52;UBERON:0002020,2.48e-22,34;UBERON:0004121,3.04e-20,95;UBERON:0000924,3.04e-20,95;UBERON:0006601,3.04e-20,95;UBERON:0002240,1.95e-18,6;UBERON:0005174,1.95e-18,6;UBERON:0001137,1.95e-18,6;UBERON:0002346,2.06e-18,64;UBERON:0003075,2.06e-18,64;UBERON:0007284,2.06e-18,64;UBERON:0001948,7.12e-16,5;UBERON:0002315,7.12e-16,5;UBERON:0010371,1.39e-15,73;UBERON:0003076,1.98e-15,12;UBERON:0003057,1.98e-15,12;UBERON:0002420,1.19e-13,8;UBERON:0007245,1.19e-13,8;UBERON:0010009,1.19e-13,8;UBERON:0010011,1.19e-13,8;UBERON:0000454,1.19e-13,8;UBERON:0002616,3.25e-13,46;UBERON:0000955,7.31e-13,47;UBERON:0006238,7.31e-13,47;UBERON:0002950,1.68e-12,4;UBERON:0001891,1.68e-12,4;UBERON:0009616,1.68e-12,4;UBERON:0010286,1.68e-12,4;UBERON:0003528,1.83e-12,29;UBERON:0002791,1.83e-12,29;UBERON:0001893,1.83e-12,29;UBERON:0003080,1.09e-11,40;UBERON:0010314,1.98e-11,92;UBERON:0002257,1.28e-10,3;UBERON:0002780,2.87e-10,39;UBERON:0001890,2.87e-10,39;UBERON:0006240,2.87e-10,39;UBERON:0002038,6.49e-10,3;UBERON:0009663,6.49e-10,3;UBERON:0009661,6.49e-10,3;UBERON:0000125,6.49e-10,3;UBERON:0002308,6.49e-10,3;UBERON:0004684,7.46e-10,3;UBERON:0002275,7.46e-10,3;UBERON:0003056,5.01e-09,49;UBERON:0000025,2.38e-08,114;UBERON:0004111,1.66e-07,122;UBERON:0011216,3.51e-07,194;UBERON:0001896,6.31e-07,2;UBERON:0002298,6.31e-07,2;UBERON:0005290,6.31e-07,2;UBERON:0010096,6.31e-07,2;UBERON:0002256,6.76e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,3.03474691289397,4.23192783417626,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.210324961351382,1.14260393761521,2.42955395046775,0.61245399607477,0.191690942036473,1.83843757322004,4.40463523997555,1.0214987046815,2.30409799884365,1.97829431595291,4.11694396210843,1.56274011167028,1.11673199600552,3.93933827022176,2.44477196442896,2.94628585473668,4.27115042397309,2.79599168737951,0.075726193333184,0.151143120213571,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.705532242814229,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,1.49790639404823,0.457500602818626,0.628271760564322,1.04294592115366,0.511430914660661,1.24672826735736,0.973447578406546,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.468508622798644,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.02904612379284,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0,1.9266070798535,1.40654023910644,0.491804836130026,0,0.315508219416257,0,0.861693590931196,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0.564751842617067,1.38097570952153,0,0.68741272937475,0,0,0.675022500231806,0.45032120322422,0.453142408984205,1.55328093525546,0,0.399024873401031,0.341467211508268,0,0.628839487883947,0.551530525350042,0,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.561849044819294,0.320125762024346,0.516919220600519,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.376437521661322,0.676916863133412,0.182927972872773,0.263069711437843,0.543216455383447,1.68342681497322,0.593175090620871,0.492522411877817,1.22769312950907,0.464810523557898,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p5@Rab3c | |||
}} |
Revision as of 14:25, 5 August 2015
Short description: | p5@Rab3c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rab3c_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_ENSMUST00000022210_5end |
EntrezGene: | 67295 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.12e-41 | 23 |
neuroblast (sensu Vertebrata) | 6.12e-41 | 23 |
neuron | 2.29e-27 | 33 |
neuronal stem cell | 2.29e-27 | 33 |
neuroblast | 2.29e-27 | 33 |
electrically signaling cell | 2.29e-27 | 33 |
electrically responsive cell | 1.46e-22 | 39 |
electrically active cell | 1.46e-22 | 39 |
neural cell | 4.22e-20 | 43 |
ectodermal cell | 1.48e-19 | 44 |
neurectodermal cell | 1.48e-19 | 44 |
embryonic cell | 7.46e-11 | 70 |
neuron of the ventral spinal cord | 1.28e-10 | 3 |
granule cell | 1.96e-10 | 3 |
striatum neuron | 3.98e-10 | 3 |
neuron of the substantia nigra | 6.49e-10 | 3 |
raphe nuclei neuron | 7.46e-10 | 3 |
somatic stem cell | 1.81e-07 | 91 |
multi fate stem cell | 1.81e-07 | 91 |
neuron of the dorsal spinal cord | 6.76e-07 | 2 |
stem cell | 8.96e-07 | 97 |