FFCP PHASE1:Mm9::chr13:100204516..100204525,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100204516..100204525,-|id=chr13:100204516..100204525,-|ontology_enrichment_celltype=CL:0000540!1.98e-12!33;CL:0000047!1.98e-12!33;CL:0000031!1.98e-12!33;CL:0000404!1.98e-12!33;CL:0000117!2.93e-11!23;CL:0000337!2.93e-11!23;CL:0002319!2.14e-09!43;CL:0000221!6.45e-09!44;CL:0000133!6.45e-09!44;CL:0000393!8.68e-09!39;CL:0000211!8.68e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,6.15e-25,23;CL:0000337,6.15e-25,23;CL:0000540,3.84e-16,33;CL:0000047,3.84e-16,33;CL:0000031,3.84e-16,33;CL:0000404,3.84e-16,33;CL:0000393,4.84e-13,39;CL:0000211,4.84e-13,39;CL:0002319,1.85e-11,43;CL:0000221,4.13e-11,44;CL:0000133,4.13e-11,44;CL:0002612,5.94e-08,3;CL:0002610,1.46e-07,3;CL:0002613,3.14e-07,3;CL:0000120,8.89e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.64e-25!71;UBERON:0003075!9.64e-25!71;UBERON:0007284!9.64e-25!71;UBERON:0001017!2.35e-24!73;UBERON:0005743!2.35e-24!73;UBERON:0000073!5.28e-24!75;UBERON:0001016!5.28e-24!75;UBERON:0004121!2.04e-21!102;UBERON:0000924!2.04e-21!102;UBERON:0006601!2.04e-21!102;UBERON:0001049!4.32e-21!52;UBERON:0005068!4.32e-21!52;UBERON:0006241!4.32e-21!52;UBERON:0007135!4.32e-21!52;UBERON:0002616!6.51e-21!49;UBERON:0000955!4.18e-20!50;UBERON:0006238!4.18e-20!50;UBERON:0003056!1.42e-19!49;UBERON:0000033!2.03e-19!63;UBERON:0003080!1.17e-17!40;UBERON:0002780!4.48e-17!39;UBERON:0001890!4.48e-17!39;UBERON:0006240!4.48e-17!39;UBERON:0002020!1.33e-16!34;UBERON:0002791!5.51e-15!29;UBERON:0003528!5.51e-15!29;UBERON:0001893!5.51e-15!29;UBERON:0000956!4.95e-13!21;UBERON:0001869!4.95e-13!21;UBERON:0000203!4.95e-13!21;UBERON:0002619!2.38e-10!17;UBERON:0000025!5.30e-09!114;UBERON:0007811!5.58e-09!86;UBERON:0002021!6.37e-09!10;UBERON:0000411!6.37e-09!10;UBERON:0001950!6.37e-09!10;UBERON:0000153!6.37e-08!94;UBERON:0004111!1.74e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.47e-33,54;UBERON:0002020,1.80e-32,34;UBERON:0003528,9.76e-29,29;UBERON:0002791,9.76e-29,29;UBERON:0001893,9.76e-29,29;UBERON:0001017,2.59e-28,73;UBERON:0001049,1.83e-27,52;UBERON:0005068,1.83e-27,52;UBERON:0006241,1.83e-27,52;UBERON:0007135,1.83e-27,52;UBERON:0001016,2.31e-27,75;UBERON:0002346,7.92e-25,64;UBERON:0003075,7.92e-25,64;UBERON:0007284,7.92e-25,64;UBERON:0002616,2.79e-24,46;UBERON:0000955,1.22e-23,47;UBERON:0006238,1.22e-23,47;UBERON:0004121,3.62e-23,95;UBERON:0000924,3.62e-23,95;UBERON:0006601,3.62e-23,95;UBERON:0000956,1.23e-22,21;UBERON:0001869,1.23e-22,21;UBERON:0000203,1.23e-22,21;UBERON:0002780,2.67e-22,39;UBERON:0001890,2.67e-22,39;UBERON:0006240,2.67e-22,39;UBERON:0003080,1.30e-21,40;UBERON:0010371,6.28e-21,73;UBERON:0003056,2.14e-20,49;UBERON:0002021,6.06e-19,10;UBERON:0000411,6.06e-19,10;UBERON:0001950,6.06e-19,10;UBERON:0002619,2.40e-18,17;UBERON:0010314,1.68e-16,92;UBERON:0000025,5.57e-10,114;UBERON:0004111,6.67e-09,122;UBERON:0002257,5.94e-08,3;UBERON:0004684,1.46e-07,3;UBERON:0002275,1.46e-07,3;UBERON:0000369,1.51e-07,5;UBERON:0002435,1.51e-07,5;UBERON:0000204,1.51e-07,5;UBERON:0010082,1.51e-07,5;UBERON:0002420,3.05e-07,8;UBERON:0007245,3.05e-07,8;UBERON:0010009,3.05e-07,8;UBERON:0010011,3.05e-07,8;UBERON:0000454,3.05e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,2.69592992002042,2.02508907497536,1.05162480675691,0.285650984403804,0,0.857435594504678,1.43768206527355,0,1.10115880999389,2.042997409363,2.76491759861238,1.18697658957174,1.00636407962651,3.64639359389732,0.279182999001381,0,4.12555268997387,3.24091444021034,2.27794689278565,1.67759501242771,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0.608930956624282,0,0.452167921657868,1.17588707135705,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,0.898743836428936,0,2.76439574648302,0.869121600961382,2.04572365864264,1.45451631191692,0.811206315338788,0.509196819251581,0,0.252722758433675,0,0.390361328888111,0,0.360124259610698,0.90422890701429,1.29269348387523,1.66547836370305,0.937017245597288,0.258703370739016,0,0.378212160335639,0,0,0.834141747676794,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,1.05144974282064,5.14523061896422,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0.610953983535943,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0.472905432318573,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,1.9266070798535,1.52375192569864,0.163934945376675,0,0.94652465824877,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0.648032044930808,0.209088296014469,0.218362563746178,0.539457385539283,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0.724752362478018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.22227665555024,2.29158205375759,2.06223818812425,2.05524755931193,3.7769694869485,2.02506750069542,1.80128481289688,0.453142408984205,3.62432218226274,1.3492355185943,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0,1.06485483695602,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.591026894253381,0.409231043169689,0,0,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p@chr13:100204516..100204525,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100204516..100204525,- | |||
|description=CAGE_peak_at_chr13:100204516..100204525,- | |||
|id=chr13:100204516..100204525,- | |||
|ontology_enrichment_celltype=CL:0000540!1.98e-12!33;CL:0000047!1.98e-12!33;CL:0000031!1.98e-12!33;CL:0000404!1.98e-12!33;CL:0000117!2.93e-11!23;CL:0000337!2.93e-11!23;CL:0002319!2.14e-09!43;CL:0000221!6.45e-09!44;CL:0000133!6.45e-09!44;CL:0000393!8.68e-09!39;CL:0000211!8.68e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.15e-25,23;CL:0000337,6.15e-25,23;CL:0000540,3.84e-16,33;CL:0000047,3.84e-16,33;CL:0000031,3.84e-16,33;CL:0000404,3.84e-16,33;CL:0000393,4.84e-13,39;CL:0000211,4.84e-13,39;CL:0002319,1.85e-11,43;CL:0000221,4.13e-11,44;CL:0000133,4.13e-11,44;CL:0002612,5.94e-08,3;CL:0002610,1.46e-07,3;CL:0002613,3.14e-07,3;CL:0000120,8.89e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.64e-25!71;UBERON:0003075!9.64e-25!71;UBERON:0007284!9.64e-25!71;UBERON:0001017!2.35e-24!73;UBERON:0005743!2.35e-24!73;UBERON:0000073!5.28e-24!75;UBERON:0001016!5.28e-24!75;UBERON:0004121!2.04e-21!102;UBERON:0000924!2.04e-21!102;UBERON:0006601!2.04e-21!102;UBERON:0001049!4.32e-21!52;UBERON:0005068!4.32e-21!52;UBERON:0006241!4.32e-21!52;UBERON:0007135!4.32e-21!52;UBERON:0002616!6.51e-21!49;UBERON:0000955!4.18e-20!50;UBERON:0006238!4.18e-20!50;UBERON:0003056!1.42e-19!49;UBERON:0000033!2.03e-19!63;UBERON:0003080!1.17e-17!40;UBERON:0002780!4.48e-17!39;UBERON:0001890!4.48e-17!39;UBERON:0006240!4.48e-17!39;UBERON:0002020!1.33e-16!34;UBERON:0002791!5.51e-15!29;UBERON:0003528!5.51e-15!29;UBERON:0001893!5.51e-15!29;UBERON:0000956!4.95e-13!21;UBERON:0001869!4.95e-13!21;UBERON:0000203!4.95e-13!21;UBERON:0002619!2.38e-10!17;UBERON:0000025!5.30e-09!114;UBERON:0007811!5.58e-09!86;UBERON:0002021!6.37e-09!10;UBERON:0000411!6.37e-09!10;UBERON:0001950!6.37e-09!10;UBERON:0000153!6.37e-08!94;UBERON:0004111!1.74e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.47e-33,54;UBERON:0002020,1.80e-32,34;UBERON:0003528,9.76e-29,29;UBERON:0002791,9.76e-29,29;UBERON:0001893,9.76e-29,29;UBERON:0001017,2.59e-28,73;UBERON:0001049,1.83e-27,52;UBERON:0005068,1.83e-27,52;UBERON:0006241,1.83e-27,52;UBERON:0007135,1.83e-27,52;UBERON:0001016,2.31e-27,75;UBERON:0002346,7.92e-25,64;UBERON:0003075,7.92e-25,64;UBERON:0007284,7.92e-25,64;UBERON:0002616,2.79e-24,46;UBERON:0000955,1.22e-23,47;UBERON:0006238,1.22e-23,47;UBERON:0004121,3.62e-23,95;UBERON:0000924,3.62e-23,95;UBERON:0006601,3.62e-23,95;UBERON:0000956,1.23e-22,21;UBERON:0001869,1.23e-22,21;UBERON:0000203,1.23e-22,21;UBERON:0002780,2.67e-22,39;UBERON:0001890,2.67e-22,39;UBERON:0006240,2.67e-22,39;UBERON:0003080,1.30e-21,40;UBERON:0010371,6.28e-21,73;UBERON:0003056,2.14e-20,49;UBERON:0002021,6.06e-19,10;UBERON:0000411,6.06e-19,10;UBERON:0001950,6.06e-19,10;UBERON:0002619,2.40e-18,17;UBERON:0010314,1.68e-16,92;UBERON:0000025,5.57e-10,114;UBERON:0004111,6.67e-09,122;UBERON:0002257,5.94e-08,3;UBERON:0004684,1.46e-07,3;UBERON:0002275,1.46e-07,3;UBERON:0000369,1.51e-07,5;UBERON:0002435,1.51e-07,5;UBERON:0000204,1.51e-07,5;UBERON:0010082,1.51e-07,5;UBERON:0002420,3.05e-07,8;UBERON:0007245,3.05e-07,8;UBERON:0010009,3.05e-07,8;UBERON:0010011,3.05e-07,8;UBERON:0000454,3.05e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,2.69592992002042,2.02508907497536,1.05162480675691,0.285650984403804,0,0.857435594504678,1.43768206527355,0,1.10115880999389,2.042997409363,2.76491759861238,1.18697658957174,1.00636407962651,3.64639359389732,0.279182999001381,0,4.12555268997387,3.24091444021034,2.27794689278565,1.67759501242771,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0.608930956624282,0,0.452167921657868,1.17588707135705,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,0.898743836428936,0,2.76439574648302,0.869121600961382,2.04572365864264,1.45451631191692,0.811206315338788,0.509196819251581,0,0.252722758433675,0,0.390361328888111,0,0.360124259610698,0.90422890701429,1.29269348387523,1.66547836370305,0.937017245597288,0.258703370739016,0,0.378212160335639,0,0,0.834141747676794,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,1.05144974282064,5.14523061896422,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0.610953983535943,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0.472905432318573,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,1.9266070798535,1.52375192569864,0.163934945376675,0,0.94652465824877,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0.648032044930808,0.209088296014469,0.218362563746178,0.539457385539283,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0.724752362478018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.22227665555024,2.29158205375759,2.06223818812425,2.05524755931193,3.7769694869485,2.02506750069542,1.80128481289688,0.453142408984205,3.62432218226274,1.3492355185943,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0,1.06485483695602,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.591026894253381,0.409231043169689,0,0,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr13:100204516..100204525,- | |||
}} |
Latest revision as of 12:30, 5 August 2015
Short description: | p@chr13:100204516..100204525, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100204516..100204525, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.15e-25 | 23 |
neuroblast (sensu Vertebrata) | 6.15e-25 | 23 |
neuron | 3.84e-16 | 33 |
neuronal stem cell | 3.84e-16 | 33 |
neuroblast | 3.84e-16 | 33 |
electrically signaling cell | 3.84e-16 | 33 |
electrically responsive cell | 4.84e-13 | 39 |
electrically active cell | 4.84e-13 | 39 |
neural cell | 1.85e-11 | 43 |
ectodermal cell | 4.13e-11 | 44 |
neurectodermal cell | 4.13e-11 | 44 |
neuron of the ventral spinal cord | 5.94e-08 | 3 |
raphe nuclei neuron | 1.46e-07 | 3 |
striatum neuron | 3.14e-07 | 3 |
granule cell | 8.89e-07 | 3 |