FFCP PHASE1:Mm9::chr13:100195086..100195101,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100195086..100195101,-|id=chr13:100195086..100195101,-|ontology_enrichment_celltype=CL:0000540!5.97e-15!33;CL:0000047!5.97e-15!33;CL:0000031!5.97e-15!33;CL:0000404!5.97e-15!33;CL:0000117!1.34e-14!23;CL:0000337!1.34e-14!23;CL:0000393!5.04e-13!39;CL:0000211!5.04e-13!39;CL:0002319!1.07e-11!43;CL:0000221!2.19e-11!44;CL:0000133!2.19e-11!44;CL:0000055!5.77e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.44e-24,23;CL:0000337,1.44e-24,23;CL:0000540,7.46e-19,33;CL:0000047,7.46e-19,33;CL:0000031,7.46e-19,33;CL:0000404,7.46e-19,33;CL:0002319,1.09e-14,43;CL:0000393,1.22e-14,39;CL:0000211,1.22e-14,39;CL:0000221,3.72e-14,44;CL:0000133,3.72e-14,44;CL:0002609,8.54e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.09e-28!75;UBERON:0001016!1.09e-28!75;UBERON:0001017!2.96e-28!73;UBERON:0005743!2.96e-28!73;UBERON:0004121!3.96e-28!102;UBERON:0000924!3.96e-28!102;UBERON:0006601!3.96e-28!102;UBERON:0002346!8.26e-28!71;UBERON:0003075!8.26e-28!71;UBERON:0007284!8.26e-28!71;UBERON:0001049!3.04e-24!52;UBERON:0005068!3.04e-24!52;UBERON:0006241!3.04e-24!52;UBERON:0007135!3.04e-24!52;UBERON:0000955!9.69e-23!50;UBERON:0006238!9.69e-23!50;UBERON:0000033!1.73e-22!63;UBERON:0002616!2.28e-22!49;UBERON:0003056!2.84e-21!49;UBERON:0003080!1.67e-19!40;UBERON:0002780!7.34e-19!39;UBERON:0001890!7.34e-19!39;UBERON:0006240!7.34e-19!39;UBERON:0002020!1.17e-18!34;UBERON:0002791!8.36e-16!29;UBERON:0003528!8.36e-16!29;UBERON:0001893!8.36e-16!29;UBERON:0000956!9.07e-11!21;UBERON:0001869!9.07e-11!21;UBERON:0000203!9.07e-11!21;UBERON:0007811!5.27e-10!86;UBERON:0002619!1.34e-08!17;UBERON:0000153!2.25e-08!94;UBERON:0000468!1.92e-07!333;UBERON:0002021!4.34e-07!10;UBERON:0000411!4.34e-07!10;UBERON:0001950!4.34e-07!10;UBERON:0000025!4.66e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.29e-40,73;UBERON:0000073,2.33e-40,54;UBERON:0001016,2.42e-40,75;UBERON:0001049,2.82e-38,52;UBERON:0005068,2.82e-38,52;UBERON:0006241,2.82e-38,52;UBERON:0007135,2.82e-38,52;UBERON:0002346,4.26e-38,64;UBERON:0003075,4.26e-38,64;UBERON:0007284,4.26e-38,64;UBERON:0004121,3.43e-35,95;UBERON:0000924,3.43e-35,95;UBERON:0006601,3.43e-35,95;UBERON:0000955,2.41e-32,47;UBERON:0006238,2.41e-32,47;UBERON:0002616,1.06e-31,46;UBERON:0010371,2.27e-31,73;UBERON:0002020,3.05e-31,34;UBERON:0003056,2.59e-30,49;UBERON:0003080,1.20e-29,40;UBERON:0002780,1.56e-28,39;UBERON:0001890,1.56e-28,39;UBERON:0006240,1.56e-28,39;UBERON:0003528,3.40e-26,29;UBERON:0002791,3.40e-26,29;UBERON:0001893,3.40e-26,29;UBERON:0010314,6.29e-25,92;UBERON:0000956,2.52e-17,21;UBERON:0001869,2.52e-17,21;UBERON:0000203,2.52e-17,21;UBERON:0002619,1.62e-13,17;UBERON:0002021,2.56e-11,10;UBERON:0000411,2.56e-11,10;UBERON:0001950,2.56e-11,10;UBERON:0002420,4.70e-10,8;UBERON:0007245,4.70e-10,8;UBERON:0010009,4.70e-10,8;UBERON:0010011,4.70e-10,8;UBERON:0000454,4.70e-10,8;UBERON:0000025,8.67e-10,114;UBERON:0003076,1.09e-08,12;UBERON:0003057,1.09e-08,12;UBERON:0004111,2.52e-08,122;UBERON:0002240,2.48e-07,6;UBERON:0005174,2.48e-07,6;UBERON:0001137,2.48e-07,6;UBERON:0000369,4.85e-07,5;UBERON:0002435,4.85e-07,5;UBERON:0000204,4.85e-07,5;UBERON:0010082,4.85e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0.218025156380447,0,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,3.84401275633236,8.46385566835253,6.33831403506179,0,0,0,0,0,0,0,2.7996195323289,2.70011876663381,2.10324961351382,1.99955689082663,1.76694832761291,2.44981598429908,3.06705507258356,1.83843757322004,5.50579404996943,2.42605942361857,2.61131106535614,1.84640802822271,6.86157327018072,7.29278718779464,4.4669279840221,2.25105044012672,3.81995619442025,8.83885756421003,4.12877874317399,2.05039390407831,0.37863096666592,1.36028808192214,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.29688427812965,0.346970653532272,2.43572382649713,0.691846491768175,1.20578112442098,1.41106448562846,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0,0,0,1.75668478206928,1.67557365450764,0,0,0,0,3.2953940669061,4.57500602818627,4.39790232395025,3.65031072403781,2.30143911597297,2.90903262383384,2.43361894601636,0.305518091550949,0.248813941220186,0.758168275301024,0.210441855886474,0.780722657776222,0.229902104433473,0.180062129805349,2.10986744970001,1.49680298132921,2.94661556655154,1.49922759295566,3.10444044886819,0,0,0,0.219195732427575,0.556094498451196,0.696504333044333,0,0.398068533636986,0,0,0,0.621377317606506,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0.771335564436891,0,0.268273401399619,0.467061369468678,0.658239399653922,0.820837320395476,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,1.89260953707715,7.82075054082562,0,0,1.06644125267617,0.928946687441754,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.164698954724011,1.25667604400135,0.397912944082302,0,0,0,0.199141273254367,0,0.456994050438915,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0.234690248288502,0,0,0.585400943573396,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,4.65596710964597,4.92289083687253,0.655739781506702,0.252470927204373,0.631016438832513,1.17131623288992,0.215423397732799,0.238968797952552,0.668396022247182,0.566153061577665,0.404810701674894,1.46127928955656,1.58115111178609,1.28528526568723,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,2.04263763452273,0.900305470156551,1.16422815404479,1.28602221018955,0.177340233642274,2.14042581122485,1.81003922662333,0.608929898229199,0,0.42366414172764,0.220528398054962,0,0.322928853391811,0.180938774784468,0.238744688006273,0,0,6.67531087237835,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.627264888043406,0.87345025498471,0.674321731924103,0.41326727862668,0.26175594198403,0.388844919875379,0,0,0.598066184175915,0,0.777804753376191,0.387479470433193,1.01373675294467,0.58678619322877,0.651021924219751,0.209718688851422,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.538283139656854,0.167884616364078,0.386379188064381,1.12609485270709,0.183151624267265,0,0,6.7770221114048,3.22227665555024,4.01026859407578,4.64003592327956,3.42541259885321,1.5107877947794,2.70009000092722,1.35096360967266,5.43770890781046,3.62432218226274,2.59468368960442,0.399024873401031,0.512200817262403,0.243106717068294,1.04806581313991,0.183843508450014,0.44449345560323,0.618105171716683,0,1.01078884705519,0.50695859978048,0.377252682772152,1.31098110457835,0.832326981263301,0.574354689556133,0.952587382566147,0.927074607558844,0.578727661391115,2.06042950401653,0.147198920134397,1.71434626192708,0.532427418478012,0.715308569841963,0.872078499793971,0.752875043322645,1.52306294205018,0.914639864363863,1.8414879800649,2.30866993537965,2.80571135828869,1.54225523561426,1.28055827088233,1.63692417267876,0.77468420592983,0.578719832943424,1.24905288968973,0.701794825336225,1.07435527024149,0.382576664137687,0.441182838239031,0|short_description=p@chr13:100195086..100195101,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100195086..100195101,- | |||
|description=CAGE_peak_at_chr13:100195086..100195101,- | |||
|id=chr13:100195086..100195101,- | |||
|ontology_enrichment_celltype=CL:0000540!5.97e-15!33;CL:0000047!5.97e-15!33;CL:0000031!5.97e-15!33;CL:0000404!5.97e-15!33;CL:0000117!1.34e-14!23;CL:0000337!1.34e-14!23;CL:0000393!5.04e-13!39;CL:0000211!5.04e-13!39;CL:0002319!1.07e-11!43;CL:0000221!2.19e-11!44;CL:0000133!2.19e-11!44;CL:0000055!5.77e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.44e-24,23;CL:0000337,1.44e-24,23;CL:0000540,7.46e-19,33;CL:0000047,7.46e-19,33;CL:0000031,7.46e-19,33;CL:0000404,7.46e-19,33;CL:0002319,1.09e-14,43;CL:0000393,1.22e-14,39;CL:0000211,1.22e-14,39;CL:0000221,3.72e-14,44;CL:0000133,3.72e-14,44;CL:0002609,8.54e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.09e-28!75;UBERON:0001016!1.09e-28!75;UBERON:0001017!2.96e-28!73;UBERON:0005743!2.96e-28!73;UBERON:0004121!3.96e-28!102;UBERON:0000924!3.96e-28!102;UBERON:0006601!3.96e-28!102;UBERON:0002346!8.26e-28!71;UBERON:0003075!8.26e-28!71;UBERON:0007284!8.26e-28!71;UBERON:0001049!3.04e-24!52;UBERON:0005068!3.04e-24!52;UBERON:0006241!3.04e-24!52;UBERON:0007135!3.04e-24!52;UBERON:0000955!9.69e-23!50;UBERON:0006238!9.69e-23!50;UBERON:0000033!1.73e-22!63;UBERON:0002616!2.28e-22!49;UBERON:0003056!2.84e-21!49;UBERON:0003080!1.67e-19!40;UBERON:0002780!7.34e-19!39;UBERON:0001890!7.34e-19!39;UBERON:0006240!7.34e-19!39;UBERON:0002020!1.17e-18!34;UBERON:0002791!8.36e-16!29;UBERON:0003528!8.36e-16!29;UBERON:0001893!8.36e-16!29;UBERON:0000956!9.07e-11!21;UBERON:0001869!9.07e-11!21;UBERON:0000203!9.07e-11!21;UBERON:0007811!5.27e-10!86;UBERON:0002619!1.34e-08!17;UBERON:0000153!2.25e-08!94;UBERON:0000468!1.92e-07!333;UBERON:0002021!4.34e-07!10;UBERON:0000411!4.34e-07!10;UBERON:0001950!4.34e-07!10;UBERON:0000025!4.66e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.29e-40,73;UBERON:0000073,2.33e-40,54;UBERON:0001016,2.42e-40,75;UBERON:0001049,2.82e-38,52;UBERON:0005068,2.82e-38,52;UBERON:0006241,2.82e-38,52;UBERON:0007135,2.82e-38,52;UBERON:0002346,4.26e-38,64;UBERON:0003075,4.26e-38,64;UBERON:0007284,4.26e-38,64;UBERON:0004121,3.43e-35,95;UBERON:0000924,3.43e-35,95;UBERON:0006601,3.43e-35,95;UBERON:0000955,2.41e-32,47;UBERON:0006238,2.41e-32,47;UBERON:0002616,1.06e-31,46;UBERON:0010371,2.27e-31,73;UBERON:0002020,3.05e-31,34;UBERON:0003056,2.59e-30,49;UBERON:0003080,1.20e-29,40;UBERON:0002780,1.56e-28,39;UBERON:0001890,1.56e-28,39;UBERON:0006240,1.56e-28,39;UBERON:0003528,3.40e-26,29;UBERON:0002791,3.40e-26,29;UBERON:0001893,3.40e-26,29;UBERON:0010314,6.29e-25,92;UBERON:0000956,2.52e-17,21;UBERON:0001869,2.52e-17,21;UBERON:0000203,2.52e-17,21;UBERON:0002619,1.62e-13,17;UBERON:0002021,2.56e-11,10;UBERON:0000411,2.56e-11,10;UBERON:0001950,2.56e-11,10;UBERON:0002420,4.70e-10,8;UBERON:0007245,4.70e-10,8;UBERON:0010009,4.70e-10,8;UBERON:0010011,4.70e-10,8;UBERON:0000454,4.70e-10,8;UBERON:0000025,8.67e-10,114;UBERON:0003076,1.09e-08,12;UBERON:0003057,1.09e-08,12;UBERON:0004111,2.52e-08,122;UBERON:0002240,2.48e-07,6;UBERON:0005174,2.48e-07,6;UBERON:0001137,2.48e-07,6;UBERON:0000369,4.85e-07,5;UBERON:0002435,4.85e-07,5;UBERON:0000204,4.85e-07,5;UBERON:0010082,4.85e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0.218025156380447,0,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,3.84401275633236,8.46385566835253,6.33831403506179,0,0,0,0,0,0,0,2.7996195323289,2.70011876663381,2.10324961351382,1.99955689082663,1.76694832761291,2.44981598429908,3.06705507258356,1.83843757322004,5.50579404996943,2.42605942361857,2.61131106535614,1.84640802822271,6.86157327018072,7.29278718779464,4.4669279840221,2.25105044012672,3.81995619442025,8.83885756421003,4.12877874317399,2.05039390407831,0.37863096666592,1.36028808192214,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.29688427812965,0.346970653532272,2.43572382649713,0.691846491768175,1.20578112442098,1.41106448562846,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0,0,0,1.75668478206928,1.67557365450764,0,0,0,0,3.2953940669061,4.57500602818627,4.39790232395025,3.65031072403781,2.30143911597297,2.90903262383384,2.43361894601636,0.305518091550949,0.248813941220186,0.758168275301024,0.210441855886474,0.780722657776222,0.229902104433473,0.180062129805349,2.10986744970001,1.49680298132921,2.94661556655154,1.49922759295566,3.10444044886819,0,0,0,0.219195732427575,0.556094498451196,0.696504333044333,0,0.398068533636986,0,0,0,0.621377317606506,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0.771335564436891,0,0.268273401399619,0.467061369468678,0.658239399653922,0.820837320395476,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,1.89260953707715,7.82075054082562,0,0,1.06644125267617,0.928946687441754,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.164698954724011,1.25667604400135,0.397912944082302,0,0,0,0.199141273254367,0,0.456994050438915,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0.234690248288502,0,0,0.585400943573396,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,4.65596710964597,4.92289083687253,0.655739781506702,0.252470927204373,0.631016438832513,1.17131623288992,0.215423397732799,0.238968797952552,0.668396022247182,0.566153061577665,0.404810701674894,1.46127928955656,1.58115111178609,1.28528526568723,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,2.04263763452273,0.900305470156551,1.16422815404479,1.28602221018955,0.177340233642274,2.14042581122485,1.81003922662333,0.608929898229199,0,0.42366414172764,0.220528398054962,0,0.322928853391811,0.180938774784468,0.238744688006273,0,0,6.67531087237835,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.627264888043406,0.87345025498471,0.674321731924103,0.41326727862668,0.26175594198403,0.388844919875379,0,0,0.598066184175915,0,0.777804753376191,0.387479470433193,1.01373675294467,0.58678619322877,0.651021924219751,0.209718688851422,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.538283139656854,0.167884616364078,0.386379188064381,1.12609485270709,0.183151624267265,0,0,6.7770221114048,3.22227665555024,4.01026859407578,4.64003592327956,3.42541259885321,1.5107877947794,2.70009000092722,1.35096360967266,5.43770890781046,3.62432218226274,2.59468368960442,0.399024873401031,0.512200817262403,0.243106717068294,1.04806581313991,0.183843508450014,0.44449345560323,0.618105171716683,0,1.01078884705519,0.50695859978048,0.377252682772152,1.31098110457835,0.832326981263301,0.574354689556133,0.952587382566147,0.927074607558844,0.578727661391115,2.06042950401653,0.147198920134397,1.71434626192708,0.532427418478012,0.715308569841963,0.872078499793971,0.752875043322645,1.52306294205018,0.914639864363863,1.8414879800649,2.30866993537965,2.80571135828869,1.54225523561426,1.28055827088233,1.63692417267876,0.77468420592983,0.578719832943424,1.24905288968973,0.701794825336225,1.07435527024149,0.382576664137687,0.441182838239031,0 | |||
|short_description=p@chr13:100195086..100195101,- | |||
}} |
Latest revision as of 12:16, 5 August 2015
Short description: | p@chr13:100195086..100195101, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100195086..100195101, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.44e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.44e-24 | 23 |
neuron | 7.46e-19 | 33 |
neuronal stem cell | 7.46e-19 | 33 |
neuroblast | 7.46e-19 | 33 |
electrically signaling cell | 7.46e-19 | 33 |
neural cell | 1.09e-14 | 43 |
electrically responsive cell | 1.22e-14 | 39 |
electrically active cell | 1.22e-14 | 39 |
ectodermal cell | 3.72e-14 | 44 |
neurectodermal cell | 3.72e-14 | 44 |
neuron of cerebral cortex | 8.54e-07 | 6 |