FFCP PHASE1:Mm9::chr1:19199119..19199134,+: Difference between revisions
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{{FFCP|EntrezGene=21419|HGNC=|MCL_coexpression_id=496|UniProt=Q8CE69|association_with_transcript=78bp_to_ENSMUST00000166387_5end|description=CAGE_peak_4_at_Tfap2b_5end|id=chr1:19199119..19199134,+|ontology_enrichment_celltype=CL:0000117!3.22e-08!23;CL:0000337!3.22e-08!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.62e-09!102;UBERON:0000924!1.62e-09!102;UBERON:0006601!1.62e-09!102;UBERON:0000970!2.97e-09!9;UBERON:0000019!2.97e-09!9;UBERON:0000047!2.97e-09!9;UBERON:0004088!2.97e-09!9;UBERON:0002104!2.97e-09!9;UBERON:0001456!2.97e-09!9;UBERON:0003072!2.97e-09!9;UBERON:0003071!2.97e-09!9;UBERON:0004128!2.97e-09!9;UBERON:0001444!1.93e-08!11;UBERON:0002346!9.75e-07!71;UBERON:0003075!9.75e-07!71;UBERON:0007284!9.75e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.55e-14,9;UBERON:0000019,2.55e-14,9;UBERON:0000047,2.55e-14,9;UBERON:0010312,2.55e-14,9;UBERON:0004088,2.55e-14,9;UBERON:0002104,2.55e-14,9;UBERON:0001456,2.55e-14,9;UBERON:0003072,2.55e-14,9;UBERON:0004128,2.55e-14,9;UBERON:0003071,2.55e-14,9;UBERON:0001444,1.98e-13,11;UBERON:0000033,6.08e-11,13;UBERON:0002102,3.11e-10,7;UBERON:0004710,3.11e-10,7;UBERON:0005419,3.11e-10,7;UBERON:0005417,3.11e-10,7;UBERON:0005729,3.11e-10,7;UBERON:0000020,3.92e-10,12;UBERON:0001032,3.92e-10,12;UBERON:0004456,3.92e-10,12;UBERON:0005085,3.58e-09,13;UBERON:0003102,7.50e-09,22;UBERON:0010708,8.95e-09,8;UBERON:0000014,5.51e-08,5;UBERON:0001003,5.51e-08,5;UBERON:0002097,5.51e-08,5;UBERON:0002199,5.51e-08,5;UBERON:0007029,5.51e-08,5;UBERON:0007376,5.51e-08,5;UBERON:0002416,5.51e-08,5;UBERON:0007383,5.51e-08,5;UBERON:0004121,1.70e-07,95;UBERON:0000924,1.70e-07,95;UBERON:0006601,1.70e-07,95;UBERON:0010371,8.06e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55994568650145,0,0,0,0,0,0,0,33.5845325026932,35.4423956112262,23.4517619297286,3.72728985276045,0.889294796111139,0,0,0,1.79760066311043,0.384218305321555,0.103689612308478,0.135005938331691,0.210324961351382,2.28520787523043,0.883474163806454,0,0,0.919218786610021,1.10115880999389,0.255374676170375,0.46081959976873,2.76961204233407,8.14240028061446,2.6045668527838,0.558365998002762,0,0,4.71405736757868,4.6982654663704,9.69277118291563,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,1.04091196059682,0.304465478312141,0.461230994512117,0.753613202763113,1.29347577849275,0.376999773989026,0,0,0,0,0,0,0,1.75668478206928,2.30391377494801,0,0,0,0,1.49790639404823,0,0,0,0,0,0,0,0.124406970610093,1.26361379216837,4.20883711772948,5.33493816147085,3.67843367093557,5.40186389416048,5.87748789559289,11.0219128625151,16.3985561964608,17.9907311154679,9.05461797586555,3.01795190105979,2.08016688184601,7.03804496655795,3.5071317188412,5.00485048606076,2.43776516565517,4.11564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.569003702859245,0.571242563048644,2.25415471346161,0.203651327845314,0,0.561086559122548,0.822074982615345,1.03327103585722,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0.905510786479282,0.857348140126369,0.532020700926821,0.535106452806212,0.164549020602121,0,0,0,0,5.93590510589328,4.19807509409354,4.1012788951146,3.46179797609096,3.28281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38710899443606,1.99512436700516,2.39027048055788,1.94485373654635,1.46729213839588,1.47074806760011,0.666740183404846,0.824140228955577,0.320919209591815,1.26348605881899,0.760437899670719,0.754505365544305,1.21733959710847,1.60062881012173,1.78049953762401,1.42888107384922,1.0429589335037,1.15745532278223,1.23625770240992,2.35518272215036,0.342869252385415,0.887379030796687,0.238436189947321,0.872078499793971,1.97629698872194,1.09998990259179,2.0122077016005,0.526139422875686,0.814824683075171,1.68342681497322,0.830445126869219,0.492522411877817,1.22769312950907,0.309873682371932,0.771626443924566,2.99772693525535,0.701794825336225,1.28922632428979,0.57386499620653,1.32354851471709,0|short_description=p4@Tfap2b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21419 | |||
|HGNC= | |||
|MCL_coexpression_id=496 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CE69 | |||
|association_with_transcript=78bp_to_ENSMUST00000166387_5end | |||
|cluster_id=chr1:19199119..19199134,+ | |||
|description=CAGE_peak_4_at_Tfap2b_5end | |||
|id=chr1:19199119..19199134,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.22e-08!23;CL:0000337!3.22e-08!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.62e-09!102;UBERON:0000924!1.62e-09!102;UBERON:0006601!1.62e-09!102;UBERON:0000970!2.97e-09!9;UBERON:0000019!2.97e-09!9;UBERON:0000047!2.97e-09!9;UBERON:0004088!2.97e-09!9;UBERON:0002104!2.97e-09!9;UBERON:0001456!2.97e-09!9;UBERON:0003072!2.97e-09!9;UBERON:0003071!2.97e-09!9;UBERON:0004128!2.97e-09!9;UBERON:0001444!1.93e-08!11;UBERON:0002346!9.75e-07!71;UBERON:0003075!9.75e-07!71;UBERON:0007284!9.75e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.55e-14,9;UBERON:0000019,2.55e-14,9;UBERON:0000047,2.55e-14,9;UBERON:0010312,2.55e-14,9;UBERON:0004088,2.55e-14,9;UBERON:0002104,2.55e-14,9;UBERON:0001456,2.55e-14,9;UBERON:0003072,2.55e-14,9;UBERON:0004128,2.55e-14,9;UBERON:0003071,2.55e-14,9;UBERON:0001444,1.98e-13,11;UBERON:0000033,6.08e-11,13;UBERON:0002102,3.11e-10,7;UBERON:0004710,3.11e-10,7;UBERON:0005419,3.11e-10,7;UBERON:0005417,3.11e-10,7;UBERON:0005729,3.11e-10,7;UBERON:0000020,3.92e-10,12;UBERON:0001032,3.92e-10,12;UBERON:0004456,3.92e-10,12;UBERON:0005085,3.58e-09,13;UBERON:0003102,7.50e-09,22;UBERON:0010708,8.95e-09,8;UBERON:0000014,5.51e-08,5;UBERON:0001003,5.51e-08,5;UBERON:0002097,5.51e-08,5;UBERON:0002199,5.51e-08,5;UBERON:0007029,5.51e-08,5;UBERON:0007376,5.51e-08,5;UBERON:0002416,5.51e-08,5;UBERON:0007383,5.51e-08,5;UBERON:0004121,1.70e-07,95;UBERON:0000924,1.70e-07,95;UBERON:0006601,1.70e-07,95;UBERON:0010371,8.06e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55994568650145,0,0,0,0,0,0,0,33.5845325026932,35.4423956112262,23.4517619297286,3.72728985276045,0.889294796111139,0,0,0,1.79760066311043,0.384218305321555,0.103689612308478,0.135005938331691,0.210324961351382,2.28520787523043,0.883474163806454,0,0,0.919218786610021,1.10115880999389,0.255374676170375,0.46081959976873,2.76961204233407,8.14240028061446,2.6045668527838,0.558365998002762,0,0,4.71405736757868,4.6982654663704,9.69277118291563,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,1.04091196059682,0.304465478312141,0.461230994512117,0.753613202763113,1.29347577849275,0.376999773989026,0,0,0,0,0,0,0,1.75668478206928,2.30391377494801,0,0,0,0,1.49790639404823,0,0,0,0,0,0,0,0.124406970610093,1.26361379216837,4.20883711772948,5.33493816147085,3.67843367093557,5.40186389416048,5.87748789559289,11.0219128625151,16.3985561964608,17.9907311154679,9.05461797586555,3.01795190105979,2.08016688184601,7.03804496655795,3.5071317188412,5.00485048606076,2.43776516565517,4.11564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.569003702859245,0.571242563048644,2.25415471346161,0.203651327845314,0,0.561086559122548,0.822074982615345,1.03327103585722,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0.905510786479282,0.857348140126369,0.532020700926821,0.535106452806212,0.164549020602121,0,0,0,0,5.93590510589328,4.19807509409354,4.1012788951146,3.46179797609096,3.28281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38710899443606,1.99512436700516,2.39027048055788,1.94485373654635,1.46729213839588,1.47074806760011,0.666740183404846,0.824140228955577,0.320919209591815,1.26348605881899,0.760437899670719,0.754505365544305,1.21733959710847,1.60062881012173,1.78049953762401,1.42888107384922,1.0429589335037,1.15745532278223,1.23625770240992,2.35518272215036,0.342869252385415,0.887379030796687,0.238436189947321,0.872078499793971,1.97629698872194,1.09998990259179,2.0122077016005,0.526139422875686,0.814824683075171,1.68342681497322,0.830445126869219,0.492522411877817,1.22769312950907,0.309873682371932,0.771626443924566,2.99772693525535,0.701794825336225,1.28922632428979,0.57386499620653,1.32354851471709,0 | |||
|short_description=p4@Tfap2b | |||
}} |
Revision as of 11:48, 5 August 2015
Short description: | p4@Tfap2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tfap2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:496 |
Association with transcript: | 78bp_to_ENSMUST00000166387_5end |
EntrezGene: | 21419 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.55e-14 | 9 |
camera-type eye | 2.55e-14 | 9 |
simple eye | 2.55e-14 | 9 |
immature eye | 2.55e-14 | 9 |
ocular region | 2.55e-14 | 9 |
visual system | 2.55e-14 | 9 |
face | 2.55e-14 | 9 |
optic cup | 2.55e-14 | 9 |
optic vesicle | 2.55e-14 | 9 |
eye primordium | 2.55e-14 | 9 |
subdivision of head | 1.98e-13 | 11 |
head | 6.08e-11 | 13 |
forelimb | 3.11e-10 | 7 |
pectoral appendage | 3.11e-10 | 7 |
pectoral appendage bud | 3.11e-10 | 7 |
forelimb bud | 3.11e-10 | 7 |
forelimb/pectoral fin field | 3.11e-10 | 7 |
sense organ | 3.92e-10 | 12 |
sensory system | 3.92e-10 | 12 |
entire sense organ system | 3.92e-10 | 12 |
ectodermal placode | 3.58e-09 | 13 |
surface structure | 7.50e-09 | 22 |
pectoral complex | 8.95e-09 | 8 |
zone of skin | 5.51e-08 | 5 |
skin epidermis | 5.51e-08 | 5 |
skin of body | 5.51e-08 | 5 |
integument | 5.51e-08 | 5 |
surface | 5.51e-08 | 5 |
outer epithelium | 5.51e-08 | 5 |
integumental system | 5.51e-08 | 5 |
enveloping layer of ectoderm | 5.51e-08 | 5 |
ectoderm-derived structure | 1.70e-07 | 95 |
ectoderm | 1.70e-07 | 95 |
presumptive ectoderm | 1.70e-07 | 95 |
ecto-epithelium | 8.06e-07 | 73 |