FFCP PHASE1:Mm9::chr15:74394100..74394126,+: Difference between revisions
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{{FFCP|EntrezGene=107831|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=-95bp_to_uc007wcr.1_5end|description=CAGE_peak_5_at_Bai1_5end|id=chr15:74394100..74394126,+|ontology_enrichment_celltype=CL:0000117!4.06e-23!23;CL:0000337!4.06e-23!23;CL:0000540!2.54e-13!33;CL:0000047!2.54e-13!33;CL:0000031!2.54e-13!33;CL:0000404!2.54e-13!33;CL:0002319!2.72e-11!43;CL:0000221!7.98e-11!44;CL:0000133!7.98e-11!44;CL:0000393!5.71e-10!39;CL:0000211!5.71e-10!39;CL:0000055!1.87e-08!50;CL:0002609!4.69e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,1.40e-47,23;CL:0000337,1.40e-47,23;CL:0000540,1.09e-31,33;CL:0000047,1.09e-31,33;CL:0000031,1.09e-31,33;CL:0000404,1.09e-31,33;CL:0000393,4.57e-26,39;CL:0000211,4.57e-26,39;CL:0002319,3.45e-23,43;CL:0000221,1.50e-22,44;CL:0000133,1.50e-22,44;CL:0002609,3.81e-15,6;CL:0002321,2.22e-12,70;CL:0000120,1.38e-09,3;CL:0002613,1.38e-09,3;CL:0002608,8.81e-09,3;CL:0002612,1.26e-08,3;CL:0000723,1.98e-08,91;CL:0000048,1.98e-08,91;CL:0002610,3.05e-08,3;CL:0000034,1.27e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.90e-26!71;UBERON:0003075!2.90e-26!71;UBERON:0007284!2.90e-26!71;UBERON:0001017!2.27e-25!73;UBERON:0005743!2.27e-25!73;UBERON:0001049!2.97e-25!52;UBERON:0005068!2.97e-25!52;UBERON:0006241!2.97e-25!52;UBERON:0007135!2.97e-25!52;UBERON:0000033!7.68e-25!63;UBERON:0000073!3.38e-24!75;UBERON:0001016!3.38e-24!75;UBERON:0000955!2.37e-23!50;UBERON:0006238!2.37e-23!50;UBERON:0003056!5.45e-23!49;UBERON:0004121!8.70e-23!102;UBERON:0000924!8.70e-23!102;UBERON:0006601!8.70e-23!102;UBERON:0002616!1.54e-22!49;UBERON:0003080!6.97e-19!40;UBERON:0002780!4.96e-18!39;UBERON:0001890!4.96e-18!39;UBERON:0006240!4.96e-18!39;UBERON:0002020!2.06e-17!34;UBERON:0007811!1.55e-14!86;UBERON:0002791!7.18e-13!29;UBERON:0003528!7.18e-13!29;UBERON:0001893!7.18e-13!29;UBERON:0000153!5.66e-12!94;UBERON:0002420!1.63e-08!8;UBERON:0007245!1.63e-08!8;UBERON:0010009!1.63e-08!8;UBERON:0010011!1.63e-08!8;UBERON:0000454!1.63e-08!8;UBERON:0003076!6.24e-07!12;UBERON:0003057!6.24e-07!12;UBERON:0002240!7.86e-07!6;UBERON:0005174!7.86e-07!6;UBERON:0001137!7.86e-07!6;UBERON:0000369!7.91e-07!5;UBERON:0002435!7.91e-07!5;UBERON:0000204!7.91e-07!5;UBERON:0010082!7.91e-07!5;UBERON:0000956!9.79e-07!21;UBERON:0001869!9.79e-07!21;UBERON:0000203!9.79e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.53e-30,54;UBERON:0002020,9.08e-30,34;UBERON:0001017,6.47e-27,73;UBERON:0002346,3.47e-26,64;UBERON:0003075,3.47e-26,64;UBERON:0007284,3.47e-26,64;UBERON:0001016,4.94e-26,75;UBERON:0004121,5.96e-26,95;UBERON:0000924,5.96e-26,95;UBERON:0006601,5.96e-26,95;UBERON:0001049,5.71e-24,52;UBERON:0005068,5.71e-24,52;UBERON:0006241,5.71e-24,52;UBERON:0007135,5.71e-24,52;UBERON:0003056,7.34e-23,49;UBERON:0010371,3.17e-22,73;UBERON:0003528,1.03e-19,29;UBERON:0002791,1.03e-19,29;UBERON:0001893,1.03e-19,29;UBERON:0003080,2.48e-19,40;UBERON:0002780,9.25e-18,39;UBERON:0001890,9.25e-18,39;UBERON:0006240,9.25e-18,39;UBERON:0010314,2.12e-16,92;UBERON:0002616,3.01e-16,46;UBERON:0000955,8.25e-16,47;UBERON:0006238,8.25e-16,47;UBERON:0000369,1.38e-14,5;UBERON:0002435,1.38e-14,5;UBERON:0000204,1.38e-14,5;UBERON:0010082,1.38e-14,5;UBERON:0001948,2.14e-13,5;UBERON:0002315,2.14e-13,5;UBERON:0002420,3.47e-12,8;UBERON:0007245,3.47e-12,8;UBERON:0010009,3.47e-12,8;UBERON:0010011,3.47e-12,8;UBERON:0000454,3.47e-12,8;UBERON:0002240,4.16e-11,6;UBERON:0005174,4.16e-11,6;UBERON:0001137,4.16e-11,6;UBERON:0000956,3.57e-10,21;UBERON:0001869,3.57e-10,21;UBERON:0000203,3.57e-10,21;UBERON:0002257,1.26e-08,3;UBERON:0004684,3.05e-08,3;UBERON:0002275,3.05e-08,3;UBERON:0000025,4.85e-08,114;UBERON:0004111,3.58e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,6.47412674750713,3.70293685490423,3.80298842103708,0,0,0,0,0,0.898800331555214,0.768436610643109,1.55534418462716,2.02508907497536,1.05162480675691,1.99955689082663,2.42955395046775,2.69479758272899,2.20444583341944,1.83843757322004,2.20231761998777,1.53224805702225,1.53606533256243,6.19865552331911,4.84884511092771,3.64639359389732,0.279182999001381,1.12552522006336,0.763991238884051,1.17851434189467,2.13557521198654,4.28718725398191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.49790639404823,2.28750301409313,2.76439574648302,1.73824320192276,0.767146371990992,2.0778804455956,0.648965052271031,0.407357455401265,0,0,0,0.780722657776222,1.14951052216736,1.44049703844279,0.60281927134286,2.24520447199382,0.768682321709099,1.03071897015702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.02904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.646793418913773,0.643011105094777,0.709360934569094,0.535106452806212,0.822745103010605,1.2178597964584,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0.56369293868419,0,0.165458490457098,0.388902376688095,0.258319646955462,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.68741272937475,0.685082519770642,0,0,0.45032120322422,1.81256963593682,0,0.830298780673413,0,0.341467211508268,0,0,0.367687016900028,0.666740183404846,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0,0.468207537349412,0.384150914429216,0.516919220600519,0,0.347652977834566,0.578727661391115,0,0,0.342869252385415,0,0.476872379894642,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.578719832943424,1.99848462350357,0,0.859484216193193,0,0,0|short_description=p5@Bai1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107831 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-95bp_to_uc007wcr.1_5end | |||
|cluster_id=chr15:74394100..74394126,+ | |||
|description=CAGE_peak_5_at_Bai1_5end | |||
|id=chr15:74394100..74394126,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.06e-23!23;CL:0000337!4.06e-23!23;CL:0000540!2.54e-13!33;CL:0000047!2.54e-13!33;CL:0000031!2.54e-13!33;CL:0000404!2.54e-13!33;CL:0002319!2.72e-11!43;CL:0000221!7.98e-11!44;CL:0000133!7.98e-11!44;CL:0000393!5.71e-10!39;CL:0000211!5.71e-10!39;CL:0000055!1.87e-08!50;CL:0002609!4.69e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.40e-47,23;CL:0000337,1.40e-47,23;CL:0000540,1.09e-31,33;CL:0000047,1.09e-31,33;CL:0000031,1.09e-31,33;CL:0000404,1.09e-31,33;CL:0000393,4.57e-26,39;CL:0000211,4.57e-26,39;CL:0002319,3.45e-23,43;CL:0000221,1.50e-22,44;CL:0000133,1.50e-22,44;CL:0002609,3.81e-15,6;CL:0002321,2.22e-12,70;CL:0000120,1.38e-09,3;CL:0002613,1.38e-09,3;CL:0002608,8.81e-09,3;CL:0002612,1.26e-08,3;CL:0000723,1.98e-08,91;CL:0000048,1.98e-08,91;CL:0002610,3.05e-08,3;CL:0000034,1.27e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.90e-26!71;UBERON:0003075!2.90e-26!71;UBERON:0007284!2.90e-26!71;UBERON:0001017!2.27e-25!73;UBERON:0005743!2.27e-25!73;UBERON:0001049!2.97e-25!52;UBERON:0005068!2.97e-25!52;UBERON:0006241!2.97e-25!52;UBERON:0007135!2.97e-25!52;UBERON:0000033!7.68e-25!63;UBERON:0000073!3.38e-24!75;UBERON:0001016!3.38e-24!75;UBERON:0000955!2.37e-23!50;UBERON:0006238!2.37e-23!50;UBERON:0003056!5.45e-23!49;UBERON:0004121!8.70e-23!102;UBERON:0000924!8.70e-23!102;UBERON:0006601!8.70e-23!102;UBERON:0002616!1.54e-22!49;UBERON:0003080!6.97e-19!40;UBERON:0002780!4.96e-18!39;UBERON:0001890!4.96e-18!39;UBERON:0006240!4.96e-18!39;UBERON:0002020!2.06e-17!34;UBERON:0007811!1.55e-14!86;UBERON:0002791!7.18e-13!29;UBERON:0003528!7.18e-13!29;UBERON:0001893!7.18e-13!29;UBERON:0000153!5.66e-12!94;UBERON:0002420!1.63e-08!8;UBERON:0007245!1.63e-08!8;UBERON:0010009!1.63e-08!8;UBERON:0010011!1.63e-08!8;UBERON:0000454!1.63e-08!8;UBERON:0003076!6.24e-07!12;UBERON:0003057!6.24e-07!12;UBERON:0002240!7.86e-07!6;UBERON:0005174!7.86e-07!6;UBERON:0001137!7.86e-07!6;UBERON:0000369!7.91e-07!5;UBERON:0002435!7.91e-07!5;UBERON:0000204!7.91e-07!5;UBERON:0010082!7.91e-07!5;UBERON:0000956!9.79e-07!21;UBERON:0001869!9.79e-07!21;UBERON:0000203!9.79e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.53e-30,54;UBERON:0002020,9.08e-30,34;UBERON:0001017,6.47e-27,73;UBERON:0002346,3.47e-26,64;UBERON:0003075,3.47e-26,64;UBERON:0007284,3.47e-26,64;UBERON:0001016,4.94e-26,75;UBERON:0004121,5.96e-26,95;UBERON:0000924,5.96e-26,95;UBERON:0006601,5.96e-26,95;UBERON:0001049,5.71e-24,52;UBERON:0005068,5.71e-24,52;UBERON:0006241,5.71e-24,52;UBERON:0007135,5.71e-24,52;UBERON:0003056,7.34e-23,49;UBERON:0010371,3.17e-22,73;UBERON:0003528,1.03e-19,29;UBERON:0002791,1.03e-19,29;UBERON:0001893,1.03e-19,29;UBERON:0003080,2.48e-19,40;UBERON:0002780,9.25e-18,39;UBERON:0001890,9.25e-18,39;UBERON:0006240,9.25e-18,39;UBERON:0010314,2.12e-16,92;UBERON:0002616,3.01e-16,46;UBERON:0000955,8.25e-16,47;UBERON:0006238,8.25e-16,47;UBERON:0000369,1.38e-14,5;UBERON:0002435,1.38e-14,5;UBERON:0000204,1.38e-14,5;UBERON:0010082,1.38e-14,5;UBERON:0001948,2.14e-13,5;UBERON:0002315,2.14e-13,5;UBERON:0002420,3.47e-12,8;UBERON:0007245,3.47e-12,8;UBERON:0010009,3.47e-12,8;UBERON:0010011,3.47e-12,8;UBERON:0000454,3.47e-12,8;UBERON:0002240,4.16e-11,6;UBERON:0005174,4.16e-11,6;UBERON:0001137,4.16e-11,6;UBERON:0000956,3.57e-10,21;UBERON:0001869,3.57e-10,21;UBERON:0000203,3.57e-10,21;UBERON:0002257,1.26e-08,3;UBERON:0004684,3.05e-08,3;UBERON:0002275,3.05e-08,3;UBERON:0000025,4.85e-08,114;UBERON:0004111,3.58e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,6.47412674750713,3.70293685490423,3.80298842103708,0,0,0,0,0,0.898800331555214,0.768436610643109,1.55534418462716,2.02508907497536,1.05162480675691,1.99955689082663,2.42955395046775,2.69479758272899,2.20444583341944,1.83843757322004,2.20231761998777,1.53224805702225,1.53606533256243,6.19865552331911,4.84884511092771,3.64639359389732,0.279182999001381,1.12552522006336,0.763991238884051,1.17851434189467,2.13557521198654,4.28718725398191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.49790639404823,2.28750301409313,2.76439574648302,1.73824320192276,0.767146371990992,2.0778804455956,0.648965052271031,0.407357455401265,0,0,0,0.780722657776222,1.14951052216736,1.44049703844279,0.60281927134286,2.24520447199382,0.768682321709099,1.03071897015702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.02904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.646793418913773,0.643011105094777,0.709360934569094,0.535106452806212,0.822745103010605,1.2178597964584,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0.56369293868419,0,0.165458490457098,0.388902376688095,0.258319646955462,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.68741272937475,0.685082519770642,0,0,0.45032120322422,1.81256963593682,0,0.830298780673413,0,0.341467211508268,0,0,0.367687016900028,0.666740183404846,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0,0.468207537349412,0.384150914429216,0.516919220600519,0,0.347652977834566,0.578727661391115,0,0,0.342869252385415,0,0.476872379894642,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.578719832943424,1.99848462350357,0,0.859484216193193,0,0,0 | |||
|short_description=p5@Bai1 | |||
}} |
Revision as of 10:47, 5 August 2015
Short description: | p5@Bai1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Bai1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -95bp_to_uc007wcr.1_5end |
EntrezGene: | 107831 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.40e-47 | 23 |
neuroblast (sensu Vertebrata) | 1.40e-47 | 23 |
neuron | 1.09e-31 | 33 |
neuronal stem cell | 1.09e-31 | 33 |
neuroblast | 1.09e-31 | 33 |
electrically signaling cell | 1.09e-31 | 33 |
electrically responsive cell | 4.57e-26 | 39 |
electrically active cell | 4.57e-26 | 39 |
neural cell | 3.45e-23 | 43 |
ectodermal cell | 1.50e-22 | 44 |
neurectodermal cell | 1.50e-22 | 44 |
neuron of cerebral cortex | 3.81e-15 | 6 |
embryonic cell | 2.22e-12 | 70 |
granule cell | 1.38e-09 | 3 |
striatum neuron | 1.38e-09 | 3 |
hippocampal neuron | 8.81e-09 | 3 |
neuron of the ventral spinal cord | 1.26e-08 | 3 |
somatic stem cell | 1.98e-08 | 91 |
multi fate stem cell | 1.98e-08 | 91 |
raphe nuclei neuron | 3.05e-08 | 3 |
stem cell | 1.27e-07 | 97 |