FFCP PHASE1:Mm9::chr17:86014794..86014802,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=578|UniProt=|association_with_transcript=-105bp_to_ENSMUST00000162311_5end|description=CAGE_peak_5_at_ENSMUST00000162311_5end|id=chr17:86014794..86014802,-|ontology_enrichment_celltype=CL:0000120!1.25e-08!3;CL:0002613!2.00e-08!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!3.59e-24!9;UBERON:0000019!3.59e-24!9;UBERON:0000047!3.59e-24!9;UBERON:0004088!3.59e-24!9;UBERON:0002104!3.59e-24!9;UBERON:0001456!3.59e-24!9;UBERON:0003072!3.59e-24!9;UBERON:0003071!3.59e-24!9;UBERON:0004128!3.59e-24!9;UBERON:0003056!2.39e-21!49;UBERON:0001444!1.91e-19!11;UBERON:0000020!1.13e-17!12;UBERON:0001032!1.13e-17!12;UBERON:0004456!1.13e-17!12;UBERON:0005085!3.59e-16!13;UBERON:0000033!1.84e-15!63;UBERON:0000007!3.05e-15!8;UBERON:0003296!3.05e-15!8;UBERON:0010133!3.05e-15!8;UBERON:0002346!3.83e-13!71;UBERON:0003075!3.83e-13!71;UBERON:0007284!3.83e-13!71;UBERON:0001894!5.50e-12!10;UBERON:0006222!5.50e-12!10;UBERON:0004121!9.09e-11!102;UBERON:0000924!9.09e-11!102;UBERON:0006601!9.09e-11!102;UBERON:0007811!5.72e-10!86;UBERON:0000153!1.07e-08!94;UBERON:0002780!3.15e-08!39;UBERON:0001890!3.15e-08!39;UBERON:0006240!3.15e-08!39;UBERON:0003080!5.90e-08!40|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.16e-43,9;UBERON:0000019,2.16e-43,9;UBERON:0000047,2.16e-43,9;UBERON:0010312,2.16e-43,9;UBERON:0004088,2.16e-43,9;UBERON:0002104,2.16e-43,9;UBERON:0001456,2.16e-43,9;UBERON:0003072,2.16e-43,9;UBERON:0004128,2.16e-43,9;UBERON:0003071,2.16e-43,9;UBERON:0001444,1.74e-35,11;UBERON:0000020,1.62e-32,12;UBERON:0001032,1.62e-32,12;UBERON:0004456,1.62e-32,12;UBERON:0000033,5.27e-30,13;UBERON:0005085,5.27e-30,13;UBERON:0003056,4.47e-19,49;UBERON:0002346,1.88e-14,64;UBERON:0003075,1.88e-14,64;UBERON:0007284,1.88e-14,64;UBERON:0010371,1.39e-12,73;UBERON:0007811,1.19e-10,36;UBERON:0010314,7.96e-10,92;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0000007,1.73e-09,8;UBERON:0003296,1.73e-09,8;UBERON:0010133,1.73e-09,8;UBERON:0000153,7.50e-09,43;UBERON:0001894,1.05e-07,10;UBERON:0006222,1.05e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.527545150920775,0.274462930807229,1.56274011167028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,1.82168620147785,1.14951052216736,2.88099407688559,1.50704817835715,1.63287597963187,1.92170580427275,2.52994656311268,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34079422240703,1.4229455216103,0.428674070063185,0.354680467284547,1.07021290561242,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@ENSMUST00000162311}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=578 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-105bp_to_ENSMUST00000162311_5end | |||
|cluster_id=chr17:86014794..86014802,- | |||
|description=CAGE_peak_5_at_ENSMUST00000162311_5end | |||
|id=chr17:86014794..86014802,- | |||
|ontology_enrichment_celltype=CL:0000120!1.25e-08!3;CL:0002613!2.00e-08!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!3.59e-24!9;UBERON:0000019!3.59e-24!9;UBERON:0000047!3.59e-24!9;UBERON:0004088!3.59e-24!9;UBERON:0002104!3.59e-24!9;UBERON:0001456!3.59e-24!9;UBERON:0003072!3.59e-24!9;UBERON:0003071!3.59e-24!9;UBERON:0004128!3.59e-24!9;UBERON:0003056!2.39e-21!49;UBERON:0001444!1.91e-19!11;UBERON:0000020!1.13e-17!12;UBERON:0001032!1.13e-17!12;UBERON:0004456!1.13e-17!12;UBERON:0005085!3.59e-16!13;UBERON:0000033!1.84e-15!63;UBERON:0000007!3.05e-15!8;UBERON:0003296!3.05e-15!8;UBERON:0010133!3.05e-15!8;UBERON:0002346!3.83e-13!71;UBERON:0003075!3.83e-13!71;UBERON:0007284!3.83e-13!71;UBERON:0001894!5.50e-12!10;UBERON:0006222!5.50e-12!10;UBERON:0004121!9.09e-11!102;UBERON:0000924!9.09e-11!102;UBERON:0006601!9.09e-11!102;UBERON:0007811!5.72e-10!86;UBERON:0000153!1.07e-08!94;UBERON:0002780!3.15e-08!39;UBERON:0001890!3.15e-08!39;UBERON:0006240!3.15e-08!39;UBERON:0003080!5.90e-08!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.16e-43,9;UBERON:0000019,2.16e-43,9;UBERON:0000047,2.16e-43,9;UBERON:0010312,2.16e-43,9;UBERON:0004088,2.16e-43,9;UBERON:0002104,2.16e-43,9;UBERON:0001456,2.16e-43,9;UBERON:0003072,2.16e-43,9;UBERON:0004128,2.16e-43,9;UBERON:0003071,2.16e-43,9;UBERON:0001444,1.74e-35,11;UBERON:0000020,1.62e-32,12;UBERON:0001032,1.62e-32,12;UBERON:0004456,1.62e-32,12;UBERON:0000033,5.27e-30,13;UBERON:0005085,5.27e-30,13;UBERON:0003056,4.47e-19,49;UBERON:0002346,1.88e-14,64;UBERON:0003075,1.88e-14,64;UBERON:0007284,1.88e-14,64;UBERON:0010371,1.39e-12,73;UBERON:0007811,1.19e-10,36;UBERON:0010314,7.96e-10,92;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0000007,1.73e-09,8;UBERON:0003296,1.73e-09,8;UBERON:0010133,1.73e-09,8;UBERON:0000153,7.50e-09,43;UBERON:0001894,1.05e-07,10;UBERON:0006222,1.05e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.527545150920775,0.274462930807229,1.56274011167028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,1.82168620147785,1.14951052216736,2.88099407688559,1.50704817835715,1.63287597963187,1.92170580427275,2.52994656311268,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34079422240703,1.4229455216103,0.428674070063185,0.354680467284547,1.07021290561242,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ENSMUST00000162311 | |||
}} |
Latest revision as of 10:45, 5 August 2015
Short description: | p5@ENSMUST00000162311 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ENSMUST00000162311_5end |
Coexpression cluster: | MCL_coexpression_mm9:578 |
Association with transcript: | -105bp_to_ENSMUST00000162311_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.16e-43 | 9 |
camera-type eye | 2.16e-43 | 9 |
simple eye | 2.16e-43 | 9 |
immature eye | 2.16e-43 | 9 |
ocular region | 2.16e-43 | 9 |
visual system | 2.16e-43 | 9 |
face | 2.16e-43 | 9 |
optic cup | 2.16e-43 | 9 |
optic vesicle | 2.16e-43 | 9 |
eye primordium | 2.16e-43 | 9 |
subdivision of head | 1.74e-35 | 11 |
sense organ | 1.62e-32 | 12 |
sensory system | 1.62e-32 | 12 |
entire sense organ system | 1.62e-32 | 12 |
head | 5.27e-30 | 13 |
ectodermal placode | 5.27e-30 | 13 |
pre-chordal neural plate | 4.47e-19 | 49 |
neurectoderm | 1.88e-14 | 64 |
neural plate | 1.88e-14 | 64 |
presumptive neural plate | 1.88e-14 | 64 |
ecto-epithelium | 1.39e-12 | 73 |
craniocervical region | 1.19e-10 | 36 |
structure with developmental contribution from neural crest | 7.96e-10 | 92 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
pituitary gland | 1.73e-09 | 8 |
gland of diencephalon | 1.73e-09 | 8 |
neuroendocrine gland | 1.73e-09 | 8 |
anterior region of body | 7.50e-09 | 43 |
diencephalon | 1.05e-07 | 10 |
future diencephalon | 1.05e-07 | 10 |