FFCP PHASE1:Mm9::chr9:57976869..57976875,+: Difference between revisions
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{{FFCP|EntrezGene=20897|HGNC=|MCL_coexpression_id=488|UniProt=O70491|association_with_transcript=-19bp_to_ENSMUST00000085677,NM_001162475,uc009pwi.2_5end|description=CAGE_peak_21_at_Stra6_5end|id=chr9:57976869..57976875,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!3.47e-14!9;UBERON:0000019!3.47e-14!9;UBERON:0000047!3.47e-14!9;UBERON:0004088!3.47e-14!9;UBERON:0002104!3.47e-14!9;UBERON:0001456!3.47e-14!9;UBERON:0003072!3.47e-14!9;UBERON:0003071!3.47e-14!9;UBERON:0004128!3.47e-14!9;UBERON:0000020!8.56e-14!12;UBERON:0001032!8.56e-14!12;UBERON:0004456!8.56e-14!12;UBERON:0005085!1.17e-12!13;UBERON:0001444!1.73e-11!11|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.33e-31,9;UBERON:0000019,1.33e-31,9;UBERON:0000047,1.33e-31,9;UBERON:0010312,1.33e-31,9;UBERON:0004088,1.33e-31,9;UBERON:0002104,1.33e-31,9;UBERON:0001456,1.33e-31,9;UBERON:0003072,1.33e-31,9;UBERON:0004128,1.33e-31,9;UBERON:0003071,1.33e-31,9;UBERON:0001444,5.07e-26,11;UBERON:0000020,6.33e-24,12;UBERON:0001032,6.33e-24,12;UBERON:0004456,6.33e-24,12;UBERON:0000033,3.77e-22,13;UBERON:0005085,3.77e-22,13;UBERON:0003056,1.64e-09,49;UBERON:0007811,1.91e-08,36;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0000153,3.65e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,7.54698569183682,5.0578462975364,3.24111833649629,2.10986744970001,0.340182495756639,0,0.749613796477831,0,0.215567992932842,0,0.527853372491847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0.388076051348264,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p21@Stra6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20897 | |||
|HGNC= | |||
|MCL_coexpression_id=488 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O70491 | |||
|association_with_transcript=-19bp_to_ENSMUST00000085677,NM_001162475,uc009pwi.2_5end | |||
|cluster_id=chr9:57976869..57976875,+ | |||
|description=CAGE_peak_21_at_Stra6_5end | |||
|id=chr9:57976869..57976875,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!3.47e-14!9;UBERON:0000019!3.47e-14!9;UBERON:0000047!3.47e-14!9;UBERON:0004088!3.47e-14!9;UBERON:0002104!3.47e-14!9;UBERON:0001456!3.47e-14!9;UBERON:0003072!3.47e-14!9;UBERON:0003071!3.47e-14!9;UBERON:0004128!3.47e-14!9;UBERON:0000020!8.56e-14!12;UBERON:0001032!8.56e-14!12;UBERON:0004456!8.56e-14!12;UBERON:0005085!1.17e-12!13;UBERON:0001444!1.73e-11!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.33e-31,9;UBERON:0000019,1.33e-31,9;UBERON:0000047,1.33e-31,9;UBERON:0010312,1.33e-31,9;UBERON:0004088,1.33e-31,9;UBERON:0002104,1.33e-31,9;UBERON:0001456,1.33e-31,9;UBERON:0003072,1.33e-31,9;UBERON:0004128,1.33e-31,9;UBERON:0003071,1.33e-31,9;UBERON:0001444,5.07e-26,11;UBERON:0000020,6.33e-24,12;UBERON:0001032,6.33e-24,12;UBERON:0004456,6.33e-24,12;UBERON:0000033,3.77e-22,13;UBERON:0005085,3.77e-22,13;UBERON:0003056,1.64e-09,49;UBERON:0007811,1.91e-08,36;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0000153,3.65e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,7.54698569183682,5.0578462975364,3.24111833649629,2.10986744970001,0.340182495756639,0,0.749613796477831,0,0.215567992932842,0,0.527853372491847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0.388076051348264,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@Stra6 | |||
}} |
Revision as of 09:26, 5 August 2015
Short description: | p21@Stra6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_Stra6_5end |
Coexpression cluster: | MCL_coexpression_mm9:488 |
Association with transcript: | -19bp_to_ENSMUST00000085677, NM_001162475, uc009pwi.2_5end |
EntrezGene: | 20897 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.33e-31 | 9 |
camera-type eye | 1.33e-31 | 9 |
simple eye | 1.33e-31 | 9 |
immature eye | 1.33e-31 | 9 |
ocular region | 1.33e-31 | 9 |
visual system | 1.33e-31 | 9 |
face | 1.33e-31 | 9 |
optic cup | 1.33e-31 | 9 |
optic vesicle | 1.33e-31 | 9 |
eye primordium | 1.33e-31 | 9 |
subdivision of head | 5.07e-26 | 11 |
sense organ | 6.33e-24 | 12 |
sensory system | 6.33e-24 | 12 |
entire sense organ system | 6.33e-24 | 12 |
head | 3.77e-22 | 13 |
ectodermal placode | 3.77e-22 | 13 |
pre-chordal neural plate | 1.64e-09 | 49 |
craniocervical region | 1.91e-08 | 36 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |
anterior region of body | 3.65e-07 | 43 |