FFCP PHASE1:Mm9::chr17:80527039..80527050,+: Difference between revisions
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{{FFCP|EntrezGene=319625|HGNC=|MCL_coexpression_id=265|UniProt=Q8K157|association_with_transcript=228bp_to_ENSMUST00000039205,NM_176963,uc008dqn.1,uc008dqo.1_5end|description=CAGE_peak_3_at_Galm_5end|id=chr17:80527039..80527050,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,2.20e-10,25;CL:0000075,3.33e-09,7;CL:0002563,8.89e-09,9;CL:0002251,8.89e-09,9;CL:0000239,1.21e-08,6;CL:0000677,1.21e-08,6;CL:0000584,1.21e-08,6;CL:0000223,2.67e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.27e-12!59;UBERON:0000160!2.57e-12!43;UBERON:0009854!6.13e-11!23;UBERON:0009856!6.13e-11!23;UBERON:0002107!1.62e-10!22;UBERON:0007499!1.62e-10!22;UBERON:0006925!1.62e-10!22;UBERON:0009497!1.62e-10!22;UBERON:0000015!1.62e-10!22;UBERON:0002423!1.62e-10!22;UBERON:0006235!1.62e-10!22;UBERON:0008835!1.62e-10!22;UBERON:0003894!1.62e-10!22;UBERON:0004161!1.62e-10!22;UBERON:0008836!1.62e-10!22;UBERON:0004119!5.58e-10!130;UBERON:0000925!5.58e-10!130;UBERON:0006595!5.58e-10!130;UBERON:0000344!8.75e-10!15;UBERON:0001007!9.16e-10!128;UBERON:0001555!9.16e-10!128;UBERON:0007026!9.16e-10!128;UBERON:0004921!7.20e-09!126;UBERON:0004185!7.20e-09!126;UBERON:0002365!1.16e-08!25;UBERON:0002330!1.16e-08!25;UBERON:0003914!1.95e-08!47;UBERON:0001242!2.00e-08!13;UBERON:0000060!2.00e-08!13;UBERON:0001262!2.00e-08!13;UBERON:0004786!2.00e-08!13;UBERON:0005172!1.39e-07!49;UBERON:0005173!1.39e-07!49;UBERON:0002417!1.39e-07!49;UBERON:0000916!1.39e-07!49;UBERON:0005256!3.48e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.33e-26,31;UBERON:0005409,5.69e-25,47;UBERON:0001007,2.80e-20,116;UBERON:0001555,2.80e-20,116;UBERON:0007026,2.80e-20,116;UBERON:0004119,1.11e-19,118;UBERON:0000925,1.11e-19,118;UBERON:0006595,1.11e-19,118;UBERON:0004921,2.19e-18,114;UBERON:0000344,1.42e-15,15;UBERON:0009854,2.03e-14,23;UBERON:0009856,2.03e-14,23;UBERON:0002107,1.24e-13,22;UBERON:0007499,1.24e-13,22;UBERON:0006925,1.24e-13,22;UBERON:0009497,1.24e-13,22;UBERON:0000015,1.24e-13,22;UBERON:0002423,1.24e-13,22;UBERON:0006235,1.24e-13,22;UBERON:0008835,1.24e-13,22;UBERON:0003894,1.24e-13,22;UBERON:0004161,1.24e-13,22;UBERON:0008836,1.24e-13,22;UBERON:0001242,5.39e-13,13;UBERON:0001262,5.39e-13,13;UBERON:0004786,5.39e-13,13;UBERON:0002365,2.07e-11,25;UBERON:0002330,2.07e-11,25;UBERON:0004923,1.62e-09,24;UBERON:0003350,8.89e-09,9;UBERON:0004808,8.89e-09,9;UBERON:0001277,8.89e-09,9;UBERON:0003929,9.58e-09,55;UBERON:0000485,2.31e-08,11;UBERON:0005172,4.64e-07,49;UBERON:0005173,4.64e-07,49;UBERON:0002417,4.64e-07,49;UBERON:0000916,4.64e-07,49;UBERON:0000490,8.14e-07,66|phase1_expression=0.320297694209588,16.40184415905,15.4699741392442,8.16653370528441,7.01254021924886,4.53274034162102,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,11.8394392867121,8.71755268055246,13.7815671387605,9.90752591165872,9.04979177280734,4.75058548640935,5.29263272495855,1.77384408524244,0,0,0,0.866554859253824,2.65975432573588,1.42918549383658,0.418531630736908,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0.771778308107841,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0.151143120213571,0.289864488701678,7.74381489283248,5.439770669662,3.2382191498269,7.79731700937203,4.92829575807069,3.65155492342555,0.170430322578058,0,0.35333957451034,1.12674735821344,0,0,0,0.216491041011214,0,0,5.709193985953,0,0,0.346970653532272,0,0.461230994512117,0,0.352766121407114,0.376999773989026,2.71914464507811,1.3013942122792,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,10.2182822083437,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.373220911830279,0.252722758433675,3.78795340595653,0,0.229902104433473,0.720248519221397,0,0.0680364991513279,0.12811372028485,0.0937017245597288,1.03481348295606,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.462801338662135,0.232533944750408,0.268273401399619,0.817357396570186,0.329119699826961,0,0.486412857275134,0.438599962275997,0.439100230582101,0.402619256281115,0,0.205809224758569,23.7901523748335,5.02456076660734,0.426576501070468,0.232236671860439,0.515469845288373,2.8235693447268,2.66853652613844,5.70676878337677,18.0321043386914,6.25856027951241,4.27269854960458,4.77495532898762,5.06906626509712,9.88701349519644,9.51007419448655,12.1476176685164,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.771494018793504,1.39120381673366,2.95220295959204,3.767969468193,3.57851775373222,10.3758419480502,0.333690211432188,0.196558995113203,0.674586337154561,1.21716072833102,0.964708639009667,2.03700681425136,1.15078454980324,2.43202840162553,7.96228098245436,1.43768206527355,8.18710084870708,7.48890415474945,5.55673531483646,10.4050499842709,13.0259750768109,0,0.189491411770485,0,0.339490171550376,0,0.335012514883631,0.714130922658041,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0.430846795465598,0.477937595905104,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0.141940085208269,0.178065603667255,0.488660878060728,1.81467135269789,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,1.55056975900933,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,0.42366414172764,0.441056796109924,0,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,11.659233465194,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,11.4560474161814,0,0.203319467126849,1.18805874903981,0.627264888043406,3.9305261474312,2.15782954215713,2.23164330458407,2.87931536182433,1.68499465279331,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.39061315453185,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0.551530525350042,0,0.824140228955577,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.448176066834085,0.861532034334199,0,0.115884325944855,0.77163688185482,0.824171801606613,0.883193520806384,0,0.532427418478012,0.476872379894642,0.581385666529314,0.564656282491984,0.676916863133412,1.09756783723664,0.526139422875686,0.814824683075171,1.12228454331548,0.355905054372522,0.492522411877817,1.22769312950907,0.77468420592983,0.578719832943424,0.249810577937946,0.701794825336225,0,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p3@Galm}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319625 | |||
|HGNC= | |||
|MCL_coexpression_id=265 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K157 | |||
|association_with_transcript=228bp_to_ENSMUST00000039205,NM_176963,uc008dqn.1,uc008dqo.1_5end | |||
|cluster_id=chr17:80527039..80527050,+ | |||
|description=CAGE_peak_3_at_Galm_5end | |||
|id=chr17:80527039..80527050,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.20e-10,25;CL:0000075,3.33e-09,7;CL:0002563,8.89e-09,9;CL:0002251,8.89e-09,9;CL:0000239,1.21e-08,6;CL:0000677,1.21e-08,6;CL:0000584,1.21e-08,6;CL:0000223,2.67e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.27e-12!59;UBERON:0000160!2.57e-12!43;UBERON:0009854!6.13e-11!23;UBERON:0009856!6.13e-11!23;UBERON:0002107!1.62e-10!22;UBERON:0007499!1.62e-10!22;UBERON:0006925!1.62e-10!22;UBERON:0009497!1.62e-10!22;UBERON:0000015!1.62e-10!22;UBERON:0002423!1.62e-10!22;UBERON:0006235!1.62e-10!22;UBERON:0008835!1.62e-10!22;UBERON:0003894!1.62e-10!22;UBERON:0004161!1.62e-10!22;UBERON:0008836!1.62e-10!22;UBERON:0004119!5.58e-10!130;UBERON:0000925!5.58e-10!130;UBERON:0006595!5.58e-10!130;UBERON:0000344!8.75e-10!15;UBERON:0001007!9.16e-10!128;UBERON:0001555!9.16e-10!128;UBERON:0007026!9.16e-10!128;UBERON:0004921!7.20e-09!126;UBERON:0004185!7.20e-09!126;UBERON:0002365!1.16e-08!25;UBERON:0002330!1.16e-08!25;UBERON:0003914!1.95e-08!47;UBERON:0001242!2.00e-08!13;UBERON:0000060!2.00e-08!13;UBERON:0001262!2.00e-08!13;UBERON:0004786!2.00e-08!13;UBERON:0005172!1.39e-07!49;UBERON:0005173!1.39e-07!49;UBERON:0002417!1.39e-07!49;UBERON:0000916!1.39e-07!49;UBERON:0005256!3.48e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.33e-26,31;UBERON:0005409,5.69e-25,47;UBERON:0001007,2.80e-20,116;UBERON:0001555,2.80e-20,116;UBERON:0007026,2.80e-20,116;UBERON:0004119,1.11e-19,118;UBERON:0000925,1.11e-19,118;UBERON:0006595,1.11e-19,118;UBERON:0004921,2.19e-18,114;UBERON:0000344,1.42e-15,15;UBERON:0009854,2.03e-14,23;UBERON:0009856,2.03e-14,23;UBERON:0002107,1.24e-13,22;UBERON:0007499,1.24e-13,22;UBERON:0006925,1.24e-13,22;UBERON:0009497,1.24e-13,22;UBERON:0000015,1.24e-13,22;UBERON:0002423,1.24e-13,22;UBERON:0006235,1.24e-13,22;UBERON:0008835,1.24e-13,22;UBERON:0003894,1.24e-13,22;UBERON:0004161,1.24e-13,22;UBERON:0008836,1.24e-13,22;UBERON:0001242,5.39e-13,13;UBERON:0001262,5.39e-13,13;UBERON:0004786,5.39e-13,13;UBERON:0002365,2.07e-11,25;UBERON:0002330,2.07e-11,25;UBERON:0004923,1.62e-09,24;UBERON:0003350,8.89e-09,9;UBERON:0004808,8.89e-09,9;UBERON:0001277,8.89e-09,9;UBERON:0003929,9.58e-09,55;UBERON:0000485,2.31e-08,11;UBERON:0005172,4.64e-07,49;UBERON:0005173,4.64e-07,49;UBERON:0002417,4.64e-07,49;UBERON:0000916,4.64e-07,49;UBERON:0000490,8.14e-07,66 | |||
|phase1_expression=0.320297694209588,16.40184415905,15.4699741392442,8.16653370528441,7.01254021924886,4.53274034162102,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,11.8394392867121,8.71755268055246,13.7815671387605,9.90752591165872,9.04979177280734,4.75058548640935,5.29263272495855,1.77384408524244,0,0,0,0.866554859253824,2.65975432573588,1.42918549383658,0.418531630736908,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0.771778308107841,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0.151143120213571,0.289864488701678,7.74381489283248,5.439770669662,3.2382191498269,7.79731700937203,4.92829575807069,3.65155492342555,0.170430322578058,0,0.35333957451034,1.12674735821344,0,0,0,0.216491041011214,0,0,5.709193985953,0,0,0.346970653532272,0,0.461230994512117,0,0.352766121407114,0.376999773989026,2.71914464507811,1.3013942122792,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,10.2182822083437,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.373220911830279,0.252722758433675,3.78795340595653,0,0.229902104433473,0.720248519221397,0,0.0680364991513279,0.12811372028485,0.0937017245597288,1.03481348295606,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.462801338662135,0.232533944750408,0.268273401399619,0.817357396570186,0.329119699826961,0,0.486412857275134,0.438599962275997,0.439100230582101,0.402619256281115,0,0.205809224758569,23.7901523748335,5.02456076660734,0.426576501070468,0.232236671860439,0.515469845288373,2.8235693447268,2.66853652613844,5.70676878337677,18.0321043386914,6.25856027951241,4.27269854960458,4.77495532898762,5.06906626509712,9.88701349519644,9.51007419448655,12.1476176685164,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.771494018793504,1.39120381673366,2.95220295959204,3.767969468193,3.57851775373222,10.3758419480502,0.333690211432188,0.196558995113203,0.674586337154561,1.21716072833102,0.964708639009667,2.03700681425136,1.15078454980324,2.43202840162553,7.96228098245436,1.43768206527355,8.18710084870708,7.48890415474945,5.55673531483646,10.4050499842709,13.0259750768109,0,0.189491411770485,0,0.339490171550376,0,0.335012514883631,0.714130922658041,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0.430846795465598,0.477937595905104,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0.141940085208269,0.178065603667255,0.488660878060728,1.81467135269789,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,1.55056975900933,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,0.42366414172764,0.441056796109924,0,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,11.659233465194,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,11.4560474161814,0,0.203319467126849,1.18805874903981,0.627264888043406,3.9305261474312,2.15782954215713,2.23164330458407,2.87931536182433,1.68499465279331,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.39061315453185,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0.551530525350042,0,0.824140228955577,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.448176066834085,0.861532034334199,0,0.115884325944855,0.77163688185482,0.824171801606613,0.883193520806384,0,0.532427418478012,0.476872379894642,0.581385666529314,0.564656282491984,0.676916863133412,1.09756783723664,0.526139422875686,0.814824683075171,1.12228454331548,0.355905054372522,0.492522411877817,1.22769312950907,0.77468420592983,0.578719832943424,0.249810577937946,0.701794825336225,0,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Galm | |||
}} |
Revision as of 09:12, 5 August 2015
Short description: | p3@Galm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Galm_5end |
Coexpression cluster: | MCL_coexpression_mm9:265 |
Association with transcript: | 228bp_to_ENSMUST00000039205, NM_176963, uc008dqn.1, uc008dqo.1_5end |
EntrezGene: | 319625 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.20e-10 | 25 |
columnar/cuboidal epithelial cell | 3.33e-09 | 7 |
intestinal epithelial cell | 8.89e-09 | 9 |
epithelial cell of alimentary canal | 8.89e-09 | 9 |
brush border epithelial cell | 1.21e-08 | 6 |
gut absorptive cell | 1.21e-08 | 6 |
enterocyte | 1.21e-08 | 6 |
endodermal cell | 2.67e-07 | 20 |