FFCP PHASE1:Mm9::chr6:137200859..137200875,+: Difference between revisions
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{{FFCP|EntrezGene=19277|HGNC=|MCL_coexpression_id=3418|UniProt=E9Q612,E9Q4I1|association_with_transcript=39bp_to_ENSMUST00000077115,ENSMUST00000167679,NM_001164401,NM_011216,uc009emu.2,uc009emv.2,uc009emw.2_5end|description=CAGE_peak_8_at_Ptpro_5end|id=chr6:137200859..137200875,+|ontology_enrichment_celltype=CL:0000117!4.14e-20!23;CL:0000337!4.14e-20!23;CL:0000540!4.16e-19!33;CL:0000047!4.16e-19!33;CL:0000031!4.16e-19!33;CL:0000404!4.16e-19!33;CL:0000393!4.35e-14!39;CL:0000211!4.35e-14!39;CL:0002319!8.76e-14!43;CL:0000221!3.66e-13!44;CL:0000133!3.66e-13!44;CL:0000055!4.99e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.26e-39,23;CL:0000337,2.26e-39,23;CL:0000540,2.47e-25,33;CL:0000047,2.47e-25,33;CL:0000031,2.47e-25,33;CL:0000404,2.47e-25,33;CL:0000393,2.19e-20,39;CL:0000211,2.19e-20,39;CL:0002319,7.31e-18,43;CL:0000221,2.64e-17,44;CL:0000133,2.64e-17,44;CL:0002609,1.62e-11,6;CL:0002321,1.66e-08,70;CL:0000120,7.81e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.23e-27!75;UBERON:0001016!2.23e-27!75;UBERON:0001017!3.67e-27!73;UBERON:0005743!3.67e-27!73;UBERON:0004121!9.53e-24!102;UBERON:0000924!9.53e-24!102;UBERON:0006601!9.53e-24!102;UBERON:0002346!2.66e-23!71;UBERON:0003075!2.66e-23!71;UBERON:0007284!2.66e-23!71;UBERON:0000033!6.05e-23!63;UBERON:0003056!9.43e-23!49;UBERON:0001049!3.44e-22!52;UBERON:0005068!3.44e-22!52;UBERON:0006241!3.44e-22!52;UBERON:0007135!3.44e-22!52;UBERON:0000955!2.14e-21!50;UBERON:0006238!2.14e-21!50;UBERON:0002616!1.73e-20!49;UBERON:0003080!2.24e-19!40;UBERON:0002780!1.27e-18!39;UBERON:0001890!1.27e-18!39;UBERON:0006240!1.27e-18!39;UBERON:0002020!3.67e-16!34;UBERON:0002791!1.18e-12!29;UBERON:0003528!1.18e-12!29;UBERON:0001893!1.18e-12!29;UBERON:0007811!2.11e-11!86;UBERON:0000153!5.48e-10!94;UBERON:0002420!4.21e-08!8;UBERON:0007245!4.21e-08!8;UBERON:0010009!4.21e-08!8;UBERON:0010011!4.21e-08!8;UBERON:0000454!4.21e-08!8;UBERON:0001894!4.12e-07!10;UBERON:0006222!4.12e-07!10;UBERON:0000956!8.64e-07!21;UBERON:0001869!8.64e-07!21;UBERON:0000203!8.64e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-34,54;UBERON:0001017,9.68e-31,73;UBERON:0001016,1.22e-29,75;UBERON:0001049,2.34e-29,52;UBERON:0005068,2.34e-29,52;UBERON:0006241,2.34e-29,52;UBERON:0007135,2.34e-29,52;UBERON:0003080,4.88e-26,40;UBERON:0002346,1.71e-25,64;UBERON:0003075,1.71e-25,64;UBERON:0007284,1.71e-25,64;UBERON:0002020,3.69e-25,34;UBERON:0000955,4.98e-25,47;UBERON:0006238,4.98e-25,47;UBERON:0002780,1.18e-24,39;UBERON:0001890,1.18e-24,39;UBERON:0006240,1.18e-24,39;UBERON:0004121,5.55e-24,95;UBERON:0000924,5.55e-24,95;UBERON:0006601,5.55e-24,95;UBERON:0002616,1.79e-23,46;UBERON:0003056,2.12e-23,49;UBERON:0010371,3.47e-21,73;UBERON:0003528,1.86e-18,29;UBERON:0002791,1.86e-18,29;UBERON:0001893,1.86e-18,29;UBERON:0010314,6.89e-15,92;UBERON:0002420,7.29e-15,8;UBERON:0007245,7.29e-15,8;UBERON:0010009,7.29e-15,8;UBERON:0010011,7.29e-15,8;UBERON:0000454,7.29e-15,8;UBERON:0000369,8.56e-10,5;UBERON:0002435,8.56e-10,5;UBERON:0000204,8.56e-10,5;UBERON:0010082,8.56e-10,5;UBERON:0000025,1.23e-08,114;UBERON:0001948,1.40e-08,5;UBERON:0002315,1.40e-08,5;UBERON:0002950,4.33e-08,4;UBERON:0001891,4.33e-08,4;UBERON:0009616,4.33e-08,4;UBERON:0010286,4.33e-08,4;UBERON:0000956,7.01e-08,21;UBERON:0001869,7.01e-08,21;UBERON:0000203,7.01e-08,21;UBERON:0004111,1.55e-07,122;UBERON:0002240,4.54e-07,6;UBERON:0005174,4.54e-07,6;UBERON:0001137,4.54e-07,6;UBERON:0001894,4.66e-07,10;UBERON:0006222,4.66e-07,10|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26022798234954,3.70293685490423,7.60597684207415,0,0,0,0,0,0,0.384218305321555,4.35496371695606,4.18518408828241,3.78584930432488,3.14216082844184,1.54607978666129,3.67472397644862,3.1629005436018,8.27296907949019,3.30347642998166,2.42605942361857,3.68655679814984,3.69281605644543,4.57438218012048,5.2091337055676,3.62937898701795,5.06486349028512,4.5839474333043,1.17851434189467,3.27454865837937,2.98239113320481,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,2.69623150928681,2.28750301409313,4.39790232395025,0.869121600961382,1.02286182932132,2.0778804455956,2.43361894601636,0.407357455401265,0,0,0.631325567659422,0.260240885925407,0.229902104433473,0.900310649026746,0.30140963567143,1.49680298132921,0.512454881139399,1.40552586839593,0.517406741478031,0,0,0.527853372491847,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.841159794256509,3.08713837137853,0,0,0,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.814605311381257,0.581857461502877,1.05203729835478,1.13825766823663,0.738050739898011,0.627994911365499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,1.28440471990234,0.820481806145422,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0.584511715822624,0,11.5675673911851,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0.900305470156551,0.646793418913773,0.857348140126369,1.24138163549592,1.24858172321449,1.15184314421485,1.2178597964584,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0.448549638131936,0.496375471371293,0.194451188344048,1.16243841129958,0.168956125490778,0.704143431874524,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,1.03111909406213,0,0,0.675022500231806,1.35096360967266,0.453142408984205,0,0.31136204275253,0.399024873401031,1.19513524027894,0.729320151204882,0.628839487883947,0.735374033800057,0.666740183404846,0.206035057238894,0.962757628775446,0,1.01391719956096,1.13175804831646,0.655490552289177,0.704276676453562,0.918967503289812,0.952587382566147,0.463537303779422,0.38581844092741,0,1.03039244094078,1.37147700954166,0.70990322463735,0.476872379894642,0.581385666529314,0.658765662907314,0.930760686808441,1.09756783723664,0,0.271608227691724,0,1.06771516311757,0.886540341380071,0.409231043169689,0.77468420592983,1.54325288784913,0.749431733813838,0,1.07435527024149,0.191288332068843,0,0|short_description=p8@Ptpro}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19277 | |||
|HGNC= | |||
|MCL_coexpression_id=3418 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q612,uniprot:E9Q4I1 | |||
|association_with_transcript=39bp_to_ENSMUST00000077115,ENSMUST00000167679,NM_001164401,NM_011216,uc009emu.2,uc009emv.2,uc009emw.2_5end | |||
|cluster_id=chr6:137200859..137200875,+ | |||
|description=CAGE_peak_8_at_Ptpro_5end | |||
|id=chr6:137200859..137200875,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.14e-20!23;CL:0000337!4.14e-20!23;CL:0000540!4.16e-19!33;CL:0000047!4.16e-19!33;CL:0000031!4.16e-19!33;CL:0000404!4.16e-19!33;CL:0000393!4.35e-14!39;CL:0000211!4.35e-14!39;CL:0002319!8.76e-14!43;CL:0000221!3.66e-13!44;CL:0000133!3.66e-13!44;CL:0000055!4.99e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.26e-39,23;CL:0000337,2.26e-39,23;CL:0000540,2.47e-25,33;CL:0000047,2.47e-25,33;CL:0000031,2.47e-25,33;CL:0000404,2.47e-25,33;CL:0000393,2.19e-20,39;CL:0000211,2.19e-20,39;CL:0002319,7.31e-18,43;CL:0000221,2.64e-17,44;CL:0000133,2.64e-17,44;CL:0002609,1.62e-11,6;CL:0002321,1.66e-08,70;CL:0000120,7.81e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.23e-27!75;UBERON:0001016!2.23e-27!75;UBERON:0001017!3.67e-27!73;UBERON:0005743!3.67e-27!73;UBERON:0004121!9.53e-24!102;UBERON:0000924!9.53e-24!102;UBERON:0006601!9.53e-24!102;UBERON:0002346!2.66e-23!71;UBERON:0003075!2.66e-23!71;UBERON:0007284!2.66e-23!71;UBERON:0000033!6.05e-23!63;UBERON:0003056!9.43e-23!49;UBERON:0001049!3.44e-22!52;UBERON:0005068!3.44e-22!52;UBERON:0006241!3.44e-22!52;UBERON:0007135!3.44e-22!52;UBERON:0000955!2.14e-21!50;UBERON:0006238!2.14e-21!50;UBERON:0002616!1.73e-20!49;UBERON:0003080!2.24e-19!40;UBERON:0002780!1.27e-18!39;UBERON:0001890!1.27e-18!39;UBERON:0006240!1.27e-18!39;UBERON:0002020!3.67e-16!34;UBERON:0002791!1.18e-12!29;UBERON:0003528!1.18e-12!29;UBERON:0001893!1.18e-12!29;UBERON:0007811!2.11e-11!86;UBERON:0000153!5.48e-10!94;UBERON:0002420!4.21e-08!8;UBERON:0007245!4.21e-08!8;UBERON:0010009!4.21e-08!8;UBERON:0010011!4.21e-08!8;UBERON:0000454!4.21e-08!8;UBERON:0001894!4.12e-07!10;UBERON:0006222!4.12e-07!10;UBERON:0000956!8.64e-07!21;UBERON:0001869!8.64e-07!21;UBERON:0000203!8.64e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-34,54;UBERON:0001017,9.68e-31,73;UBERON:0001016,1.22e-29,75;UBERON:0001049,2.34e-29,52;UBERON:0005068,2.34e-29,52;UBERON:0006241,2.34e-29,52;UBERON:0007135,2.34e-29,52;UBERON:0003080,4.88e-26,40;UBERON:0002346,1.71e-25,64;UBERON:0003075,1.71e-25,64;UBERON:0007284,1.71e-25,64;UBERON:0002020,3.69e-25,34;UBERON:0000955,4.98e-25,47;UBERON:0006238,4.98e-25,47;UBERON:0002780,1.18e-24,39;UBERON:0001890,1.18e-24,39;UBERON:0006240,1.18e-24,39;UBERON:0004121,5.55e-24,95;UBERON:0000924,5.55e-24,95;UBERON:0006601,5.55e-24,95;UBERON:0002616,1.79e-23,46;UBERON:0003056,2.12e-23,49;UBERON:0010371,3.47e-21,73;UBERON:0003528,1.86e-18,29;UBERON:0002791,1.86e-18,29;UBERON:0001893,1.86e-18,29;UBERON:0010314,6.89e-15,92;UBERON:0002420,7.29e-15,8;UBERON:0007245,7.29e-15,8;UBERON:0010009,7.29e-15,8;UBERON:0010011,7.29e-15,8;UBERON:0000454,7.29e-15,8;UBERON:0000369,8.56e-10,5;UBERON:0002435,8.56e-10,5;UBERON:0000204,8.56e-10,5;UBERON:0010082,8.56e-10,5;UBERON:0000025,1.23e-08,114;UBERON:0001948,1.40e-08,5;UBERON:0002315,1.40e-08,5;UBERON:0002950,4.33e-08,4;UBERON:0001891,4.33e-08,4;UBERON:0009616,4.33e-08,4;UBERON:0010286,4.33e-08,4;UBERON:0000956,7.01e-08,21;UBERON:0001869,7.01e-08,21;UBERON:0000203,7.01e-08,21;UBERON:0004111,1.55e-07,122;UBERON:0002240,4.54e-07,6;UBERON:0005174,4.54e-07,6;UBERON:0001137,4.54e-07,6;UBERON:0001894,4.66e-07,10;UBERON:0006222,4.66e-07,10 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26022798234954,3.70293685490423,7.60597684207415,0,0,0,0,0,0,0.384218305321555,4.35496371695606,4.18518408828241,3.78584930432488,3.14216082844184,1.54607978666129,3.67472397644862,3.1629005436018,8.27296907949019,3.30347642998166,2.42605942361857,3.68655679814984,3.69281605644543,4.57438218012048,5.2091337055676,3.62937898701795,5.06486349028512,4.5839474333043,1.17851434189467,3.27454865837937,2.98239113320481,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,2.69623150928681,2.28750301409313,4.39790232395025,0.869121600961382,1.02286182932132,2.0778804455956,2.43361894601636,0.407357455401265,0,0,0.631325567659422,0.260240885925407,0.229902104433473,0.900310649026746,0.30140963567143,1.49680298132921,0.512454881139399,1.40552586839593,0.517406741478031,0,0,0.527853372491847,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.841159794256509,3.08713837137853,0,0,0,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.814605311381257,0.581857461502877,1.05203729835478,1.13825766823663,0.738050739898011,0.627994911365499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,1.28440471990234,0.820481806145422,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0.584511715822624,0,11.5675673911851,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0.900305470156551,0.646793418913773,0.857348140126369,1.24138163549592,1.24858172321449,1.15184314421485,1.2178597964584,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0.448549638131936,0.496375471371293,0.194451188344048,1.16243841129958,0.168956125490778,0.704143431874524,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,1.03111909406213,0,0,0.675022500231806,1.35096360967266,0.453142408984205,0,0.31136204275253,0.399024873401031,1.19513524027894,0.729320151204882,0.628839487883947,0.735374033800057,0.666740183404846,0.206035057238894,0.962757628775446,0,1.01391719956096,1.13175804831646,0.655490552289177,0.704276676453562,0.918967503289812,0.952587382566147,0.463537303779422,0.38581844092741,0,1.03039244094078,1.37147700954166,0.70990322463735,0.476872379894642,0.581385666529314,0.658765662907314,0.930760686808441,1.09756783723664,0,0.271608227691724,0,1.06771516311757,0.886540341380071,0.409231043169689,0.77468420592983,1.54325288784913,0.749431733813838,0,1.07435527024149,0.191288332068843,0,0 | |||
|short_description=p8@Ptpro | |||
}} |
Revision as of 08:27, 5 August 2015
Short description: | p8@Ptpro |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Ptpro_5end |
Coexpression cluster: | MCL_coexpression_mm9:3418 |
Association with transcript: | 39bp_to_ENSMUST00000077115, ENSMUST00000167679, NM_001164401, NM_011216, uc009emu.2, uc009emv.2, uc009emw.2_5end |
EntrezGene: | 19277 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.26e-39 | 23 |
neuroblast (sensu Vertebrata) | 2.26e-39 | 23 |
neuron | 2.47e-25 | 33 |
neuronal stem cell | 2.47e-25 | 33 |
neuroblast | 2.47e-25 | 33 |
electrically signaling cell | 2.47e-25 | 33 |
electrically responsive cell | 2.19e-20 | 39 |
electrically active cell | 2.19e-20 | 39 |
neural cell | 7.31e-18 | 43 |
ectodermal cell | 2.64e-17 | 44 |
neurectodermal cell | 2.64e-17 | 44 |
neuron of cerebral cortex | 1.62e-11 | 6 |
embryonic cell | 1.66e-08 | 70 |
granule cell | 7.81e-07 | 3 |