FFCP PHASE1:Mm9::chr7:51789647..51789658,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18971|HGNC=|MCL_coexpression_id=3625|UniProt=|association_with_transcript=-88bp_to_ENSMUST00000147503_5end|description=CAGE_peak_4_at_Pold1_5end|id=chr7:51789647..51789658,-|ontology_enrichment_celltype=CL:0000239!3.92e-07!6;CL:0000677!3.92e-07!6;CL:0000212!3.92e-07!6;CL:0000584!3.92e-07!6;CL:0000553!4.86e-07!6;CL:0000556!4.86e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,5.03e-18,6;CL:0000677,5.03e-18,6;CL:0000584,5.03e-18,6;CL:0000075,1.68e-15,7;CL:0002563,3.97e-12,9;CL:0002251,3.97e-12,9;CL:0000553,5.11e-11,6;CL:0000556,5.11e-11,6;CL:0000682,1.75e-10,3;CL:0000066,1.47e-09,25;CL:0000945,1.84e-08,1;CL:0000236,1.84e-08,1;CL:0000826,1.84e-08,1;CL:0000050,1.61e-07,9;CL:0002076,2.24e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.30e-11!48;UBERON:0004923!2.30e-10!24;UBERON:0002465!3.24e-08!3;UBERON:0002390!3.80e-08!45;UBERON:0003061!3.80e-08!45;UBERON:0002405!1.13e-07!70;UBERON:0000344!1.68e-07!15;UBERON:0004177!5.04e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.26e-15,15;UBERON:0001242,8.15e-13,13;UBERON:0001262,8.15e-13,13;UBERON:0004786,8.15e-13,13;UBERON:0003350,3.97e-12,9;UBERON:0004808,3.97e-12,9;UBERON:0001277,3.97e-12,9;UBERON:0000485,5.66e-10,11;UBERON:0004923,1.11e-09,24;UBERON:0002465,1.40e-09,3;UBERON:0000029,7.68e-08,1;UBERON:0001097,7.68e-08,1;UBERON:0003968,7.68e-08,1;UBERON:0001467,7.68e-08,1;UBERON:0003199,1.05e-07,1|phase1_expression=0,1.74487703819681,1.36499771816861,0,0,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0.202475267389826,0,2.83915948822414,2.05671650408608,2.54633791078818,0,0.198581902401771,0.261199789138935,0.95995453676044,1.14704640533585,2.8711598205751,0,4.52489588640367,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.358053391334963,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p4@Pold1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18971 | |||
|HGNC= | |||
|MCL_coexpression_id=3625 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-88bp_to_ENSMUST00000147503_5end | |||
|cluster_id=chr7:51789647..51789658,- | |||
|description=CAGE_peak_4_at_Pold1_5end | |||
|id=chr7:51789647..51789658,- | |||
|ontology_enrichment_celltype=CL:0000239!3.92e-07!6;CL:0000677!3.92e-07!6;CL:0000212!3.92e-07!6;CL:0000584!3.92e-07!6;CL:0000553!4.86e-07!6;CL:0000556!4.86e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.03e-18,6;CL:0000677,5.03e-18,6;CL:0000584,5.03e-18,6;CL:0000075,1.68e-15,7;CL:0002563,3.97e-12,9;CL:0002251,3.97e-12,9;CL:0000553,5.11e-11,6;CL:0000556,5.11e-11,6;CL:0000682,1.75e-10,3;CL:0000066,1.47e-09,25;CL:0000945,1.84e-08,1;CL:0000236,1.84e-08,1;CL:0000826,1.84e-08,1;CL:0000050,1.61e-07,9;CL:0002076,2.24e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.30e-11!48;UBERON:0004923!2.30e-10!24;UBERON:0002465!3.24e-08!3;UBERON:0002390!3.80e-08!45;UBERON:0003061!3.80e-08!45;UBERON:0002405!1.13e-07!70;UBERON:0000344!1.68e-07!15;UBERON:0004177!5.04e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.26e-15,15;UBERON:0001242,8.15e-13,13;UBERON:0001262,8.15e-13,13;UBERON:0004786,8.15e-13,13;UBERON:0003350,3.97e-12,9;UBERON:0004808,3.97e-12,9;UBERON:0001277,3.97e-12,9;UBERON:0000485,5.66e-10,11;UBERON:0004923,1.11e-09,24;UBERON:0002465,1.40e-09,3;UBERON:0000029,7.68e-08,1;UBERON:0001097,7.68e-08,1;UBERON:0003968,7.68e-08,1;UBERON:0001467,7.68e-08,1;UBERON:0003199,1.05e-07,1 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,0,0,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0.202475267389826,0,2.83915948822414,2.05671650408608,2.54633791078818,0,0.198581902401771,0.261199789138935,0.95995453676044,1.14704640533585,2.8711598205751,0,4.52489588640367,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.358053391334963,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p4@Pold1 | |||
}} |
Revision as of 07:18, 5 August 2015
Short description: | p4@Pold1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pold1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3625 |
Association with transcript: | -88bp_to_ENSMUST00000147503_5end |
EntrezGene: | 18971 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.03e-18 | 6 |
gut absorptive cell | 5.03e-18 | 6 |
enterocyte | 5.03e-18 | 6 |
columnar/cuboidal epithelial cell | 1.68e-15 | 7 |
intestinal epithelial cell | 3.97e-12 | 9 |
epithelial cell of alimentary canal | 3.97e-12 | 9 |
megakaryocyte progenitor cell | 5.11e-11 | 6 |
megakaryocyte | 5.11e-11 | 6 |
M cell of gut | 1.75e-10 | 3 |
epithelial cell | 1.47e-09 | 25 |
lymphocyte of B lineage | 1.84e-08 | 1 |
B cell | 1.84e-08 | 1 |
pro-B cell | 1.84e-08 | 1 |
megakaryocyte-erythroid progenitor cell | 1.61e-07 | 9 |
endo-epithelial cell | 2.24e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.26e-15 | 15 |
intestinal mucosa | 8.15e-13 | 13 |
wall of intestine | 8.15e-13 | 13 |
gastrointestinal system mucosa | 8.15e-13 | 13 |
epithelium of mucosa | 3.97e-12 | 9 |
gastrointestinal system epithelium | 3.97e-12 | 9 |
intestinal epithelium | 3.97e-12 | 9 |
simple columnar epithelium | 5.66e-10 | 11 |
organ component layer | 1.11e-09 | 24 |
lymphoid system | 1.40e-09 | 3 |
lymph node | 7.68e-08 | 1 |
axillary lymph node | 7.68e-08 | 1 |
peripheral lymph node | 7.68e-08 | 1 |
shoulder | 7.68e-08 | 1 |
egg chamber | 1.05e-07 | 1 |