FFCP PHASE1:Mm9::chr7:51640173..51640214,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20981|HGNC=|MCL_coexpression_id=1|UniProt=G3X9Y1|association_with_transcript=-23bp_to_ENSMUST00000120262_5end|description=CAGE_peak_2_at_Syt3_5end|id=chr7:51640173..51640214,+|ontology_enrichment_celltype=CL:0000117!2.79e-15!23;CL:0000337!2.79e-15!23;CL:0000540!4.06e-09!33;CL:0000047!4.06e-09!33;CL:0000031!4.06e-09!33;CL:0000404!4.06e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.35e-26,23;CL:0000337,6.35e-26,23;CL:0000540,5.04e-16,33;CL:0000047,5.04e-16,33;CL:0000031,5.04e-16,33;CL:0000404,5.04e-16,33;CL:0000393,1.44e-12,39;CL:0000211,1.44e-12,39;CL:0002319,8.12e-11,43;CL:0000221,1.97e-10,44;CL:0000133,1.97e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.89e-27!52;UBERON:0005068!1.89e-27!52;UBERON:0006241!1.89e-27!52;UBERON:0007135!1.89e-27!52;UBERON:0000033!3.76e-26!63;UBERON:0000955!9.80e-26!50;UBERON:0006238!9.80e-26!50;UBERON:0002616!4.47e-25!49;UBERON:0001017!1.07e-23!73;UBERON:0005743!1.07e-23!73;UBERON:0000073!3.74e-23!75;UBERON:0001016!3.74e-23!75;UBERON:0002346!2.18e-21!71;UBERON:0003075!2.18e-21!71;UBERON:0007284!2.18e-21!71;UBERON:0003056!2.83e-21!49;UBERON:0002020!4.92e-21!34;UBERON:0003080!5.57e-21!40;UBERON:0002780!4.27e-20!39;UBERON:0001890!4.27e-20!39;UBERON:0006240!4.27e-20!39;UBERON:0004121!2.00e-19!102;UBERON:0000924!2.00e-19!102;UBERON:0006601!2.00e-19!102;UBERON:0002791!5.62e-17!29;UBERON:0003528!5.62e-17!29;UBERON:0001893!5.62e-17!29;UBERON:0007811!3.13e-13!86;UBERON:0000956!1.80e-11!21;UBERON:0001869!1.80e-11!21;UBERON:0000203!1.80e-11!21;UBERON:0000153!6.97e-11!94;UBERON:0002619!3.68e-09!17;UBERON:0002021!8.23e-09!10;UBERON:0000411!8.23e-09!10;UBERON:0001950!8.23e-09!10;UBERON:0003076!5.93e-07!12;UBERON:0003057!5.93e-07!12;UBERON:0002420!7.86e-07!8;UBERON:0007245!7.86e-07!8;UBERON:0010009!7.86e-07!8;UBERON:0010011!7.86e-07!8;UBERON:0000454!7.86e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-40,54;UBERON:0001049,1.69e-37,52;UBERON:0005068,1.69e-37,52;UBERON:0006241,1.69e-37,52;UBERON:0007135,1.69e-37,52;UBERON:0001017,2.67e-35,73;UBERON:0002020,4.20e-35,34;UBERON:0001016,5.40e-34,75;UBERON:0000955,2.05e-30,47;UBERON:0006238,2.05e-30,47;UBERON:0002616,2.35e-29,46;UBERON:0002346,3.42e-28,64;UBERON:0003075,3.42e-28,64;UBERON:0007284,3.42e-28,64;UBERON:0003528,4.85e-28,29;UBERON:0002791,4.85e-28,29;UBERON:0001893,4.85e-28,29;UBERON:0003080,8.94e-26,40;UBERON:0004121,2.61e-25,95;UBERON:0000924,2.61e-25,95;UBERON:0006601,2.61e-25,95;UBERON:0002780,2.25e-24,39;UBERON:0001890,2.25e-24,39;UBERON:0006240,2.25e-24,39;UBERON:0010371,3.06e-23,73;UBERON:0003056,2.33e-19,49;UBERON:0000956,1.77e-18,21;UBERON:0001869,1.77e-18,21;UBERON:0000203,1.77e-18,21;UBERON:0010314,5.07e-16,92;UBERON:0002619,1.77e-14,17;UBERON:0002021,3.85e-14,10;UBERON:0000411,3.85e-14,10;UBERON:0001950,3.85e-14,10;UBERON:0000025,3.19e-12,114;UBERON:0003076,7.12e-12,12;UBERON:0003057,7.12e-12,12;UBERON:0004111,1.83e-11,122;UBERON:0002420,1.02e-10,8;UBERON:0007245,1.02e-10,8;UBERON:0010009,1.02e-10,8;UBERON:0010011,1.02e-10,8;UBERON:0000454,1.02e-10,8;UBERON:0002240,2.13e-09,6;UBERON:0005174,2.13e-09,6;UBERON:0001137,2.13e-09,6;UBERON:0001948,3.37e-08,5;UBERON:0002315,3.37e-08,5;UBERON:0000369,6.64e-07,5;UBERON:0002435,6.64e-07,5;UBERON:0000204,6.64e-07,5;UBERON:0010082,6.64e-07,5;UBERON:0002950,7.23e-07,4;UBERON:0001891,7.23e-07,4;UBERON:0009616,7.23e-07,4;UBERON:0010286,7.23e-07,4|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,5.26022798234954,4.7609188134483,6.33831403506179,0,0,0,0.988866362566974,0,0,0,1.34796496001021,2.70011876663381,1.89292465216244,11.9973413449598,11.9269012113871,2.08234358665422,2.1086003624012,0,12.1127469099328,10.7257363991558,10.752457327937,5.53922408466814,6.49562269577109,4.16730696445408,10.3297709630511,7.87867654044352,9.93188610549266,10.3120004915784,9.5389026135399,7.45597783301202,0,0.151143120213571,0,0.860423876981386,0,1.07940638327563,0,0.448026887097336,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,13.1751358655196,10.8912287542997,0.510914110417183,0,0,0,12.7322043494099,8.6925114535539,2.26177833803156,9.73416193076748,7.92717917724025,9.3504620051802,10.3834408363365,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0.468508622798644,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.134206418760372,14.930586348053,3.2929475961371,0,0,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0.126473074248515,0,0,0.370191491765402,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,9.15138362930414,9.25972324078405,0,0,0,0,0,0,0,0.283076530788832,0,0,0,3.21321316421807,0,0.178065603667255,0,0,7.96470830039777,0,0,0,0.590603785761546,0.307435147943927,0,0.727067458955011,1.42598951353889,1.58018378967908,1.05418608574999,2.06271086496374,0.340439605753788,0.36012218806262,0.258717367565509,0.214337035031592,0.709360934569094,1.24858172321449,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,7.97328798645192,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0,0,0,0,0,0.129614973291793,3.72803587852155,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,12.9892923801925,17.0320337507655,14.8952833494243,10.998603669996,9.59115527678899,3.7769694869485,7.42524750254986,4.05289082901798,5.43770890781046,7.24864436452548,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0.735374033800057,0.44449345560323,1.44224540067226,0.320919209591815,1.01078884705519,1.2673964994512,0.943131706930381,0.749132059759059,0.832326981263301,0.918967503289812,0.476293691283074,1.0429589335037,0.38581844092741,0.824171801606613,0.294397840268795,0.342869252385415,1.24233064311536,0.238436189947321,0.872078499793971,0.846984423737976,1.18460451048347,0.365855945745545,1.31534855718921,1.08643291076689,0.561142271657738,0.711810108745045,1.37906275325789,0.409231043169689,0.464810523557898,0.771626443924566,2.74791635731741,0.233931608445408,1.07435527024149,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p2@Syt3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20981 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3X9Y1 | |||
|association_with_transcript=-23bp_to_ENSMUST00000120262_5end | |||
|cluster_id=chr7:51640173..51640214,+ | |||
|description=CAGE_peak_2_at_Syt3_5end | |||
|id=chr7:51640173..51640214,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.79e-15!23;CL:0000337!2.79e-15!23;CL:0000540!4.06e-09!33;CL:0000047!4.06e-09!33;CL:0000031!4.06e-09!33;CL:0000404!4.06e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.35e-26,23;CL:0000337,6.35e-26,23;CL:0000540,5.04e-16,33;CL:0000047,5.04e-16,33;CL:0000031,5.04e-16,33;CL:0000404,5.04e-16,33;CL:0000393,1.44e-12,39;CL:0000211,1.44e-12,39;CL:0002319,8.12e-11,43;CL:0000221,1.97e-10,44;CL:0000133,1.97e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.89e-27!52;UBERON:0005068!1.89e-27!52;UBERON:0006241!1.89e-27!52;UBERON:0007135!1.89e-27!52;UBERON:0000033!3.76e-26!63;UBERON:0000955!9.80e-26!50;UBERON:0006238!9.80e-26!50;UBERON:0002616!4.47e-25!49;UBERON:0001017!1.07e-23!73;UBERON:0005743!1.07e-23!73;UBERON:0000073!3.74e-23!75;UBERON:0001016!3.74e-23!75;UBERON:0002346!2.18e-21!71;UBERON:0003075!2.18e-21!71;UBERON:0007284!2.18e-21!71;UBERON:0003056!2.83e-21!49;UBERON:0002020!4.92e-21!34;UBERON:0003080!5.57e-21!40;UBERON:0002780!4.27e-20!39;UBERON:0001890!4.27e-20!39;UBERON:0006240!4.27e-20!39;UBERON:0004121!2.00e-19!102;UBERON:0000924!2.00e-19!102;UBERON:0006601!2.00e-19!102;UBERON:0002791!5.62e-17!29;UBERON:0003528!5.62e-17!29;UBERON:0001893!5.62e-17!29;UBERON:0007811!3.13e-13!86;UBERON:0000956!1.80e-11!21;UBERON:0001869!1.80e-11!21;UBERON:0000203!1.80e-11!21;UBERON:0000153!6.97e-11!94;UBERON:0002619!3.68e-09!17;UBERON:0002021!8.23e-09!10;UBERON:0000411!8.23e-09!10;UBERON:0001950!8.23e-09!10;UBERON:0003076!5.93e-07!12;UBERON:0003057!5.93e-07!12;UBERON:0002420!7.86e-07!8;UBERON:0007245!7.86e-07!8;UBERON:0010009!7.86e-07!8;UBERON:0010011!7.86e-07!8;UBERON:0000454!7.86e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-40,54;UBERON:0001049,1.69e-37,52;UBERON:0005068,1.69e-37,52;UBERON:0006241,1.69e-37,52;UBERON:0007135,1.69e-37,52;UBERON:0001017,2.67e-35,73;UBERON:0002020,4.20e-35,34;UBERON:0001016,5.40e-34,75;UBERON:0000955,2.05e-30,47;UBERON:0006238,2.05e-30,47;UBERON:0002616,2.35e-29,46;UBERON:0002346,3.42e-28,64;UBERON:0003075,3.42e-28,64;UBERON:0007284,3.42e-28,64;UBERON:0003528,4.85e-28,29;UBERON:0002791,4.85e-28,29;UBERON:0001893,4.85e-28,29;UBERON:0003080,8.94e-26,40;UBERON:0004121,2.61e-25,95;UBERON:0000924,2.61e-25,95;UBERON:0006601,2.61e-25,95;UBERON:0002780,2.25e-24,39;UBERON:0001890,2.25e-24,39;UBERON:0006240,2.25e-24,39;UBERON:0010371,3.06e-23,73;UBERON:0003056,2.33e-19,49;UBERON:0000956,1.77e-18,21;UBERON:0001869,1.77e-18,21;UBERON:0000203,1.77e-18,21;UBERON:0010314,5.07e-16,92;UBERON:0002619,1.77e-14,17;UBERON:0002021,3.85e-14,10;UBERON:0000411,3.85e-14,10;UBERON:0001950,3.85e-14,10;UBERON:0000025,3.19e-12,114;UBERON:0003076,7.12e-12,12;UBERON:0003057,7.12e-12,12;UBERON:0004111,1.83e-11,122;UBERON:0002420,1.02e-10,8;UBERON:0007245,1.02e-10,8;UBERON:0010009,1.02e-10,8;UBERON:0010011,1.02e-10,8;UBERON:0000454,1.02e-10,8;UBERON:0002240,2.13e-09,6;UBERON:0005174,2.13e-09,6;UBERON:0001137,2.13e-09,6;UBERON:0001948,3.37e-08,5;UBERON:0002315,3.37e-08,5;UBERON:0000369,6.64e-07,5;UBERON:0002435,6.64e-07,5;UBERON:0000204,6.64e-07,5;UBERON:0010082,6.64e-07,5;UBERON:0002950,7.23e-07,4;UBERON:0001891,7.23e-07,4;UBERON:0009616,7.23e-07,4;UBERON:0010286,7.23e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,5.26022798234954,4.7609188134483,6.33831403506179,0,0,0,0.988866362566974,0,0,0,1.34796496001021,2.70011876663381,1.89292465216244,11.9973413449598,11.9269012113871,2.08234358665422,2.1086003624012,0,12.1127469099328,10.7257363991558,10.752457327937,5.53922408466814,6.49562269577109,4.16730696445408,10.3297709630511,7.87867654044352,9.93188610549266,10.3120004915784,9.5389026135399,7.45597783301202,0,0.151143120213571,0,0.860423876981386,0,1.07940638327563,0,0.448026887097336,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,13.1751358655196,10.8912287542997,0.510914110417183,0,0,0,12.7322043494099,8.6925114535539,2.26177833803156,9.73416193076748,7.92717917724025,9.3504620051802,10.3834408363365,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0.468508622798644,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.134206418760372,14.930586348053,3.2929475961371,0,0,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0.126473074248515,0,0,0.370191491765402,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,9.15138362930414,9.25972324078405,0,0,0,0,0,0,0,0.283076530788832,0,0,0,3.21321316421807,0,0.178065603667255,0,0,7.96470830039777,0,0,0,0.590603785761546,0.307435147943927,0,0.727067458955011,1.42598951353889,1.58018378967908,1.05418608574999,2.06271086496374,0.340439605753788,0.36012218806262,0.258717367565509,0.214337035031592,0.709360934569094,1.24858172321449,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,7.97328798645192,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0,0,0,0,0,0.129614973291793,3.72803587852155,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,12.9892923801925,17.0320337507655,14.8952833494243,10.998603669996,9.59115527678899,3.7769694869485,7.42524750254986,4.05289082901798,5.43770890781046,7.24864436452548,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0.735374033800057,0.44449345560323,1.44224540067226,0.320919209591815,1.01078884705519,1.2673964994512,0.943131706930381,0.749132059759059,0.832326981263301,0.918967503289812,0.476293691283074,1.0429589335037,0.38581844092741,0.824171801606613,0.294397840268795,0.342869252385415,1.24233064311536,0.238436189947321,0.872078499793971,0.846984423737976,1.18460451048347,0.365855945745545,1.31534855718921,1.08643291076689,0.561142271657738,0.711810108745045,1.37906275325789,0.409231043169689,0.464810523557898,0.771626443924566,2.74791635731741,0.233931608445408,1.07435527024149,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p2@Syt3 | |||
}} |
Revision as of 06:16, 5 August 2015
Short description: | p2@Syt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Syt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -23bp_to_ENSMUST00000120262_5end |
EntrezGene: | 20981 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.35e-26 | 23 |
neuroblast (sensu Vertebrata) | 6.35e-26 | 23 |
neuron | 5.04e-16 | 33 |
neuronal stem cell | 5.04e-16 | 33 |
neuroblast | 5.04e-16 | 33 |
electrically signaling cell | 5.04e-16 | 33 |
electrically responsive cell | 1.44e-12 | 39 |
electrically active cell | 1.44e-12 | 39 |
neural cell | 8.12e-11 | 43 |
ectodermal cell | 1.97e-10 | 44 |
neurectodermal cell | 1.97e-10 | 44 |