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FFCP PHASE1:Mm9::chr9:48170117..48170139,+: Difference between revisions

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{{FFCP|EntrezGene=244853|HGNC=|MCL_coexpression_id=15|UniProt=Q52KP5|association_with_transcript=0bp_to_NM_172921_5end|description=CAGE_peak_2_at_Fam55d_5end|id=chr9:48170117..48170139,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,5.80e-07,3;CL:0002006,5.80e-07,3;CL:0002024,5.80e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!3.73e-07!6;UBERON:0004457!3.73e-07!6;UBERON:0000042!3.73e-07!6;UBERON:0004854!3.73e-07!6;UBERON:0009034!3.73e-07!6;UBERON:0002095!3.73e-07!6;UBERON:0004782!3.73e-07!6;UBERON:0003281!3.73e-07!6;UBERON:0009664!3.73e-07!6;UBERON:0002296!3.73e-07!6;UBERON:0005602!3.73e-07!6;UBERON:0001179!3.73e-07!6;UBERON:0006293!3.73e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.61e-12,6;UBERON:0004457,5.61e-12,6;UBERON:0000042,5.61e-12,6;UBERON:0004854,5.61e-12,6;UBERON:0009034,5.61e-12,6;UBERON:0002095,5.61e-12,6;UBERON:0004782,5.61e-12,6;UBERON:0003281,5.61e-12,6;UBERON:0009664,5.61e-12,6;UBERON:0002296,5.61e-12,6;UBERON:0005602,5.61e-12,6;UBERON:0001179,5.61e-12,6;UBERON:0006293,5.61e-12,6;UBERON:0003887,4.26e-09,10;UBERON:0005172,1.49e-08,49;UBERON:0005173,1.49e-08,49;UBERON:0002417,1.49e-08,49;UBERON:0000916,1.49e-08,49;UBERON:0002107,2.01e-08,22;UBERON:0007499,2.01e-08,22;UBERON:0006925,2.01e-08,22;UBERON:0009497,2.01e-08,22;UBERON:0000015,2.01e-08,22;UBERON:0002423,2.01e-08,22;UBERON:0006235,2.01e-08,22;UBERON:0008835,2.01e-08,22;UBERON:0003894,2.01e-08,22;UBERON:0004161,2.01e-08,22;UBERON:0008836,2.01e-08,22;UBERON:0000981,5.92e-08,4;UBERON:0003608,5.92e-08,4;UBERON:0003826,5.92e-08,4;UBERON:0008202,5.92e-08,4;UBERON:0004381,5.92e-08,4;UBERON:0007273,5.92e-08,4;UBERON:0010912,5.92e-08,4;UBERON:0002513,5.92e-08,4;UBERON:0004375,5.92e-08,4;UBERON:0010740,5.92e-08,4;UBERON:0010363,5.92e-08,4;UBERON:0003860,5.92e-08,4;UBERON:0002428,5.92e-08,4;UBERON:0010742,5.92e-08,4;UBERON:0002495,5.92e-08,4;UBERON:0003464,5.92e-08,4;UBERON:0003606,5.92e-08,4;UBERON:0005893,5.92e-08,4;UBERON:0009749,5.92e-08,4;UBERON:0010712,5.92e-08,4;UBERON:0010886,5.92e-08,4;UBERON:0005254,5.92e-08,4;UBERON:0010885,5.92e-08,4;UBERON:0010881,5.92e-08,4;UBERON:0010882,5.92e-08,4;UBERON:0007844,5.92e-08,4;UBERON:0001441,5.92e-08,4;UBERON:0011249,5.92e-08,4;UBERON:0002091,5.92e-08,4;UBERON:0003285,5.92e-08,4;UBERON:0004288,5.92e-08,4;UBERON:0010129,5.92e-08,4;UBERON:0006234,5.92e-08,4;UBERON:0009854,6.06e-08,23;UBERON:0009856,6.06e-08,23;UBERON:0002365,4.19e-07,25;UBERON:0002330,4.19e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3243904726265,31.383666445423,28.682037003254,0.473193248037357,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,4.44521471421742,3.07532393792285,0,0,0,0,1.25559489221072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.913396434936424,0.230615497256059,0.452167921657868,0.352766121407114,0,0,0.144599356919912,11.4999371753484,3.39710384889559,9.49618529379692,10.6672555689749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0769646194175,0,0,0.130120442962704,0,0,0.60281927134286,0,0,0,0,0,0,0.351902248327898,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,15.3497497258807,17.6903095601883,33.0547305205735,23.1260538382893,19.7765270996982,12.2220408855082,9.49397253587675,5.67473293712624,9.33508804839477,2.87536413054709,1.48856379067401,0.936113019343682,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,1.45668381692989,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,17.428829841381,2.47664241555867,13.519200497989,36.3551122019054,39.2312433559342,21.2763701082066,0,0,0.138199973804424,0,0.474503990371703,0.203319467126849,0.324016022465404,0,0,0.539457385539283,0.247960367176008,0,0,0,0,0.448549638131936,0.330916980914195,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0.120195449519969,0,0,0,0.201652370273681,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,2.21953687480374,4.86213434136588,3.14419743941973,1.10306105070008,0.666740183404846,1.64828045791115,0.64183841918363,1.01078884705519,1.01391719956096,0.754505365544305,1.591905626988,1.02440243847791,1.03383844120104,0.952587382566147,1.39061191133827,0.578727661391115,0,0.883193520806384,0.342869252385415,0.887379030796687,1.1921809497366,1.74415699958794,1.69396884747595,0.930760686808441,1.46342378298218,0.526139422875686,1.35804113845862,2.24456908663095,0.593175090620871,0.886540341380071,0.818462086339379,1.39443157067369,2.70069255373598,0,0.233931608445408,1.28922632428979,0,2.8676884485537,2.55054619182464|short_description=p2@Fam55d}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:244853
|HGNC=
|MCL_coexpression_id=15
|TSSclassifier=NA
|UniProt=uniprot:Q52KP5
|association_with_transcript=0bp_to_NM_172921_5end
|cluster_id=chr9:48170117..48170139,+
|description=CAGE_peak_2_at_Fam55d_5end
|id=chr9:48170117..48170139,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002027,5.80e-07,3;CL:0002006,5.80e-07,3;CL:0002024,5.80e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002106!3.73e-07!6;UBERON:0004457!3.73e-07!6;UBERON:0000042!3.73e-07!6;UBERON:0004854!3.73e-07!6;UBERON:0009034!3.73e-07!6;UBERON:0002095!3.73e-07!6;UBERON:0004782!3.73e-07!6;UBERON:0003281!3.73e-07!6;UBERON:0009664!3.73e-07!6;UBERON:0002296!3.73e-07!6;UBERON:0005602!3.73e-07!6;UBERON:0001179!3.73e-07!6;UBERON:0006293!3.73e-07!6
|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.61e-12,6;UBERON:0004457,5.61e-12,6;UBERON:0000042,5.61e-12,6;UBERON:0004854,5.61e-12,6;UBERON:0009034,5.61e-12,6;UBERON:0002095,5.61e-12,6;UBERON:0004782,5.61e-12,6;UBERON:0003281,5.61e-12,6;UBERON:0009664,5.61e-12,6;UBERON:0002296,5.61e-12,6;UBERON:0005602,5.61e-12,6;UBERON:0001179,5.61e-12,6;UBERON:0006293,5.61e-12,6;UBERON:0003887,4.26e-09,10;UBERON:0005172,1.49e-08,49;UBERON:0005173,1.49e-08,49;UBERON:0002417,1.49e-08,49;UBERON:0000916,1.49e-08,49;UBERON:0002107,2.01e-08,22;UBERON:0007499,2.01e-08,22;UBERON:0006925,2.01e-08,22;UBERON:0009497,2.01e-08,22;UBERON:0000015,2.01e-08,22;UBERON:0002423,2.01e-08,22;UBERON:0006235,2.01e-08,22;UBERON:0008835,2.01e-08,22;UBERON:0003894,2.01e-08,22;UBERON:0004161,2.01e-08,22;UBERON:0008836,2.01e-08,22;UBERON:0000981,5.92e-08,4;UBERON:0003608,5.92e-08,4;UBERON:0003826,5.92e-08,4;UBERON:0008202,5.92e-08,4;UBERON:0004381,5.92e-08,4;UBERON:0007273,5.92e-08,4;UBERON:0010912,5.92e-08,4;UBERON:0002513,5.92e-08,4;UBERON:0004375,5.92e-08,4;UBERON:0010740,5.92e-08,4;UBERON:0010363,5.92e-08,4;UBERON:0003860,5.92e-08,4;UBERON:0002428,5.92e-08,4;UBERON:0010742,5.92e-08,4;UBERON:0002495,5.92e-08,4;UBERON:0003464,5.92e-08,4;UBERON:0003606,5.92e-08,4;UBERON:0005893,5.92e-08,4;UBERON:0009749,5.92e-08,4;UBERON:0010712,5.92e-08,4;UBERON:0010886,5.92e-08,4;UBERON:0005254,5.92e-08,4;UBERON:0010885,5.92e-08,4;UBERON:0010881,5.92e-08,4;UBERON:0010882,5.92e-08,4;UBERON:0007844,5.92e-08,4;UBERON:0001441,5.92e-08,4;UBERON:0011249,5.92e-08,4;UBERON:0002091,5.92e-08,4;UBERON:0003285,5.92e-08,4;UBERON:0004288,5.92e-08,4;UBERON:0010129,5.92e-08,4;UBERON:0006234,5.92e-08,4;UBERON:0009854,6.06e-08,23;UBERON:0009856,6.06e-08,23;UBERON:0002365,4.19e-07,25;UBERON:0002330,4.19e-07,25
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3243904726265,31.383666445423,28.682037003254,0.473193248037357,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,4.44521471421742,3.07532393792285,0,0,0,0,1.25559489221072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.913396434936424,0.230615497256059,0.452167921657868,0.352766121407114,0,0,0.144599356919912,11.4999371753484,3.39710384889559,9.49618529379692,10.6672555689749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0769646194175,0,0,0.130120442962704,0,0,0.60281927134286,0,0,0,0,0,0,0.351902248327898,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,15.3497497258807,17.6903095601883,33.0547305205735,23.1260538382893,19.7765270996982,12.2220408855082,9.49397253587675,5.67473293712624,9.33508804839477,2.87536413054709,1.48856379067401,0.936113019343682,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,1.45668381692989,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,17.428829841381,2.47664241555867,13.519200497989,36.3551122019054,39.2312433559342,21.2763701082066,0,0,0.138199973804424,0,0.474503990371703,0.203319467126849,0.324016022465404,0,0,0.539457385539283,0.247960367176008,0,0,0,0,0.448549638131936,0.330916980914195,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0.120195449519969,0,0,0,0.201652370273681,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,2.21953687480374,4.86213434136588,3.14419743941973,1.10306105070008,0.666740183404846,1.64828045791115,0.64183841918363,1.01078884705519,1.01391719956096,0.754505365544305,1.591905626988,1.02440243847791,1.03383844120104,0.952587382566147,1.39061191133827,0.578727661391115,0,0.883193520806384,0.342869252385415,0.887379030796687,1.1921809497366,1.74415699958794,1.69396884747595,0.930760686808441,1.46342378298218,0.526139422875686,1.35804113845862,2.24456908663095,0.593175090620871,0.886540341380071,0.818462086339379,1.39443157067369,2.70069255373598,0,0.233931608445408,1.28922632428979,0,2.8676884485537,2.55054619182464
|short_description=p2@Fam55d
}}

Revision as of 06:09, 5 August 2015

Short description:p2@Fam55d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Fam55d_5end
Coexpression cluster:MCL_coexpression_mm9:15
Association with transcript: 0bp_to_NM_172921_5end
EntrezGene:244853
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Fam55d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A331.38
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A528.68
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A69.50
bone (os femoris), neonate N20.CNhs11195.1350-25C310.67
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.08
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F815.35
liver, embryo E13.CNhs10524.378-3H617.69
liver, embryo E14.CNhs10594.409-16E133.05
liver, embryo E15.CNhs10520.433-16D723.13
liver, embryo E16.CNhs10523.462-17F519.78
liver, embryo E17.CNhs10510.481-18A312.22
liver, embryo E18.CNhs10579.499-43G49.49
liver, neonate N00.CNhs11117.641-24F45.67
liver, neonate N03.CNhs11123.1345-25G29.34
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G217.43
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F213.52
spleen, neonate N10.CNhs11116.752-24D136.36
spleen, neonate N20.CNhs11112.824-19H139.23
spleen, neonate N25.CNhs11099.1354-25G321.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B42.55





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
spleen5.61e-126
cavity lining5.61e-126
serous membrane5.61e-126
gastrointestinal system mesentery5.61e-126
stomach region5.61e-126
mesentery5.61e-126
gastrointestinal system serosa5.61e-126
mesentery of stomach5.61e-126
gut mesentery5.61e-126
dorsal mesentery5.61e-126
dorsal mesogastrium5.61e-126
peritoneal cavity5.61e-126
spleen primordium5.61e-126
intraembryonic coelom4.26e-0910
abdomen element1.49e-0849
abdominal segment element1.49e-0849
abdominal segment of trunk1.49e-0849
abdomen1.49e-0849
liver2.01e-0822
epithelial sac2.01e-0822
digestive gland2.01e-0822
epithelium of foregut-midgut junction2.01e-0822
anatomical boundary2.01e-0822
hepatobiliary system2.01e-0822
foregut-midgut junction2.01e-0822
hepatic diverticulum2.01e-0822
liver primordium2.01e-0822
septum transversum2.01e-0822
liver bud2.01e-0822
femur5.92e-084
hindlimb long bone5.92e-084
upper leg bone5.92e-084
bone of hip region5.92e-084
skeleton of limb5.92e-084
pelvic appendage skeleton5.92e-084
subdivision of skeleton5.92e-084
endochondral bone5.92e-084
bone of free limb or fin5.92e-084
bone of appendage girdle complex5.92e-084
endochondral element5.92e-084
hindlimb mesenchyme5.92e-084
limb bone5.92e-084
bone of pelvic complex5.92e-084
long bone5.92e-084
hindlimb bone5.92e-084
limb long bone5.92e-084
leg bone5.92e-084
limb mesenchyme5.92e-084
limb skeleton subdivision5.92e-084
hindlimb bone pre-cartilage condensation5.92e-084
upper leg mesenchyme5.92e-084
hindlimb cartilage element5.92e-084
limb cartilage element5.92e-084
limb bone pre-cartilage condensation5.92e-084
cartilage element5.92e-084
hindlimb skeleton5.92e-084
appendicular skeletal system5.92e-084
appendicular skeleton5.92e-084
limb of embryo5.92e-084
skeleton5.92e-084
femur cartilage element5.92e-084
femur pre-cartilage condensation5.92e-084
digestive tract diverticulum6.06e-0823
sac6.06e-0823
exocrine gland4.19e-0725
exocrine system4.19e-0725
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