FFCP PHASE1:Mm9::chr9:46050350..46050364,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=191|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46050350..46050364,+|id=chr9:46050350..46050364,+|ontology_enrichment_celltype=CL:0000239!5.86e-10!6;CL:0000677!5.86e-10!6;CL:0000212!5.86e-10!6;CL:0000584!5.86e-10!6;CL:0000075!2.20e-08!7;CL:0000066!5.98e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,1.88e-13,6;CL:0000677,1.88e-13,6;CL:0000584,1.88e-13,6;CL:0000075,1.70e-11,7;CL:0000682,3.13e-10,3;CL:0000066,4.53e-09,25;CL:0002563,7.00e-09,9;CL:0002251,7.00e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.87e-18!43;UBERON:0000344!6.40e-14!15;UBERON:0005409!2.61e-13!59;UBERON:0001242!6.69e-11!13;UBERON:0000060!6.69e-11!13;UBERON:0001262!6.69e-11!13;UBERON:0004786!6.69e-11!13;UBERON:0004923!2.69e-10!24;UBERON:0004119!7.83e-07!130;UBERON:0000925!7.83e-07!130;UBERON:0006595!7.83e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.14e-38,31;UBERON:0005409,1.11e-23,47;UBERON:0000344,1.52e-16,15;UBERON:0004923,5.75e-12,24;UBERON:0001007,8.84e-12,116;UBERON:0001555,8.84e-12,116;UBERON:0007026,8.84e-12,116;UBERON:0004119,1.68e-11,118;UBERON:0000925,1.68e-11,118;UBERON:0006595,1.68e-11,118;UBERON:0001242,2.23e-11,13;UBERON:0001262,2.23e-11,13;UBERON:0004786,2.23e-11,13;UBERON:0004921,1.79e-09,114;UBERON:0003350,7.00e-09,9;UBERON:0004808,7.00e-09,9;UBERON:0001277,7.00e-09,9;UBERON:0001962,2.68e-08,2;UBERON:0001961,2.68e-08,2;UBERON:0001744,2.68e-08,2;UBERON:0000485,3.26e-07,11|phase1_expression=0,11.8651638597383,9.55498402718026,3.62957053568196,5.50985302940982,0.671517087647559,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8386815660528,21.3350631392468,5.16808767703518,4.73838195774982,8.61884930743556,0.950117097281869,0.252030129759931,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.47968467078526,0.539703191637817,0,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,3.21353458054686,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9038198384653,7.93351699990633,0,0,0,0.403367049246685,2.66853652613844,3.23383564391351,7.11793592316767,9.71723832871664,10.304743560811,9.15199771389294,6.82374304916921,7.19055526923377,6.05186539649144,4.58024928485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,11.659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.87345025498471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.618105171716683,0,0,0.760437899670719,0.188626341386076,0.37456602987953,0.320125762024346,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.644613162144895,0,0,0|short_description=p@chr9:46050350..46050364,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:46050350..46050364,+ | |||
|description=CAGE_peak_at_chr9:46050350..46050364,+ | |||
|id=chr9:46050350..46050364,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.86e-10!6;CL:0000677!5.86e-10!6;CL:0000212!5.86e-10!6;CL:0000584!5.86e-10!6;CL:0000075!2.20e-08!7;CL:0000066!5.98e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.88e-13,6;CL:0000677,1.88e-13,6;CL:0000584,1.88e-13,6;CL:0000075,1.70e-11,7;CL:0000682,3.13e-10,3;CL:0000066,4.53e-09,25;CL:0002563,7.00e-09,9;CL:0002251,7.00e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.87e-18!43;UBERON:0000344!6.40e-14!15;UBERON:0005409!2.61e-13!59;UBERON:0001242!6.69e-11!13;UBERON:0000060!6.69e-11!13;UBERON:0001262!6.69e-11!13;UBERON:0004786!6.69e-11!13;UBERON:0004923!2.69e-10!24;UBERON:0004119!7.83e-07!130;UBERON:0000925!7.83e-07!130;UBERON:0006595!7.83e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.14e-38,31;UBERON:0005409,1.11e-23,47;UBERON:0000344,1.52e-16,15;UBERON:0004923,5.75e-12,24;UBERON:0001007,8.84e-12,116;UBERON:0001555,8.84e-12,116;UBERON:0007026,8.84e-12,116;UBERON:0004119,1.68e-11,118;UBERON:0000925,1.68e-11,118;UBERON:0006595,1.68e-11,118;UBERON:0001242,2.23e-11,13;UBERON:0001262,2.23e-11,13;UBERON:0004786,2.23e-11,13;UBERON:0004921,1.79e-09,114;UBERON:0003350,7.00e-09,9;UBERON:0004808,7.00e-09,9;UBERON:0001277,7.00e-09,9;UBERON:0001962,2.68e-08,2;UBERON:0001961,2.68e-08,2;UBERON:0001744,2.68e-08,2;UBERON:0000485,3.26e-07,11 | |||
|phase1_expression=0,11.8651638597383,9.55498402718026,3.62957053568196,5.50985302940982,0.671517087647559,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8386815660528,21.3350631392468,5.16808767703518,4.73838195774982,8.61884930743556,0.950117097281869,0.252030129759931,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.47968467078526,0.539703191637817,0,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,3.21353458054686,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9038198384653,7.93351699990633,0,0,0,0.403367049246685,2.66853652613844,3.23383564391351,7.11793592316767,9.71723832871664,10.304743560811,9.15199771389294,6.82374304916921,7.19055526923377,6.05186539649144,4.58024928485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,11.659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.87345025498471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.618105171716683,0,0,0.760437899670719,0.188626341386076,0.37456602987953,0.320125762024346,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.644613162144895,0,0,0 | |||
|short_description=p@chr9:46050350..46050364,+ | |||
}} |
Latest revision as of 05:35, 5 August 2015
Short description: | p@chr9:46050350..46050364, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46050350..46050364, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.88e-13 | 6 |
gut absorptive cell | 1.88e-13 | 6 |
enterocyte | 1.88e-13 | 6 |
columnar/cuboidal epithelial cell | 1.70e-11 | 7 |
M cell of gut | 3.13e-10 | 3 |
epithelial cell | 4.53e-09 | 25 |
intestinal epithelial cell | 7.00e-09 | 9 |
epithelial cell of alimentary canal | 7.00e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.14e-38 | 31 |
gastrointestinal system | 1.11e-23 | 47 |
mucosa | 1.52e-16 | 15 |
organ component layer | 5.75e-12 | 24 |
digestive system | 8.84e-12 | 116 |
digestive tract | 8.84e-12 | 116 |
primitive gut | 8.84e-12 | 116 |
endoderm-derived structure | 1.68e-11 | 118 |
endoderm | 1.68e-11 | 118 |
presumptive endoderm | 1.68e-11 | 118 |
intestinal mucosa | 2.23e-11 | 13 |
wall of intestine | 2.23e-11 | 13 |
gastrointestinal system mucosa | 2.23e-11 | 13 |
subdivision of digestive tract | 1.79e-09 | 114 |
epithelium of mucosa | 7.00e-09 | 9 |
gastrointestinal system epithelium | 7.00e-09 | 9 |
intestinal epithelium | 7.00e-09 | 9 |
gut-associated lymphoid tissue | 2.68e-08 | 2 |
mucosa-associated lymphoid tissue | 2.68e-08 | 2 |
lymphoid tissue | 2.68e-08 | 2 |
simple columnar epithelium | 3.26e-07 | 11 |