FFCP PHASE1:Mm9::chr2:4221954..4221977,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=209630|HGNC=|MCL_coexpression_id=1442|UniProt=B1AXJ9|association_with_transcript=19bp_to_ENSMUST00000115037_5end|description=CAGE_peak_29_at_Frmd4a_5end|id=chr2:4221954..4221977,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002102!2.92e-07!8;UBERON:0004710!2.92e-07!8;UBERON:0005419!2.92e-07!8;UBERON:0005417!2.92e-07!8;UBERON:0005729!2.92e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0010708,2.40e-18,8;UBERON:0002102,4.74e-16,7;UBERON:0004710,4.74e-16,7;UBERON:0005419,4.74e-16,7;UBERON:0005417,4.74e-16,7;UBERON:0005729,4.74e-16,7;UBERON:0000970,2.03e-12,9;UBERON:0000019,2.03e-12,9;UBERON:0000047,2.03e-12,9;UBERON:0010312,2.03e-12,9;UBERON:0004088,2.03e-12,9;UBERON:0002104,2.03e-12,9;UBERON:0001456,2.03e-12,9;UBERON:0003072,2.03e-12,9;UBERON:0004128,2.03e-12,9;UBERON:0003071,2.03e-12,9;UBERON:0000020,4.77e-12,12;UBERON:0001032,4.77e-12,12;UBERON:0004456,4.77e-12,12;UBERON:0000033,4.79e-11,13;UBERON:0005085,4.79e-11,13;UBERON:0010707,6.38e-11,13;UBERON:0001444,4.89e-10,11;UBERON:0000153,7.46e-10,43;UBERON:0000026,4.37e-09,12;UBERON:0004708,4.37e-09,12;UBERON:0002101,4.37e-09,12;UBERON:0004357,4.37e-09,12;UBERON:0004347,4.37e-09,12;UBERON:0005732,4.37e-09,12;UBERON:0005733,4.37e-09,12|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.31790010585369,0.183546752161682,0,0,0,0,0,0,0,0,0,0.514518872071894,0.573066879877513,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0.226714680320357,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0,1.03575153458869,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0.470354828542819,0,0,0,0,0.485300549842228,0.441683036920787,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0,0.203678727700633,0.248813941220186,0,0,1.56144531555244,0.919608417733892,1.80062129805349,1.80845781402858,2.65342346690179,1.66547836370305,2.52994656311268,0.258703370739016,1.72454394346274,3.59301552318857,3.69497360744293,1.97276159184817,1.39023624612799,1.39300866608867,0.823128545631774,0.796137067273973,0,0,0,0.621377317606506,0.938104239924385,1.08037236876609,1.18372367792605,0.787056926989615,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.486412857275134,0.438599962275997,0,0.671032093801859,0,0,0,0,0.853153002140936,0.464473343720877,0.644337306610467,0.201683524623343,0.22237804384487,0,0,0.658795818896044,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0,0.126473074248515,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,1.51593129416388,0.488894929326078,0.169745085775188,0.938760993154008,0,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.655453258862952,0.172684981865896,0,0,0,0.491764273019036,0,0.160550589987792,0.234423373184406,0.491804836130026,0.252470927204373,2.2085575359138,0.390438744296638,1.07711698866399,0.238968797952552,0,0,0.404810701674894,0.876767573733936,1.97643888973262,1.28528526568723,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0.604647113929502,0.565815239267694,0.885905678642318,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.540183282093931,0.517434735131018,0.643011105094777,1.24138163549592,0.535106452806212,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0.180938774784468,0.119372344003136,0,0,0.370850604021019,0.170870880797853,0.619160603889667,0.925972636848558,0,0.136694227721025,0.228778173206523,0,0,0,0,0.790839983952838,1.42323626988794,0.324016022465404,0,0.87345025498471,0.674321731924103,0.165306911450672,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0.234714477291508,0.2604087696879,0,0,0,0,0,0.205421914329655,0,0.358053391334963,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0.93841237725591,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,1.03787347584177,1.99512436700516,2.04880326904961,1.21553358534147,0,0,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.842773567228942,0.128050304809739,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0,0.685738504770831,0.177475806159338,0.715308569841963,0.290692833264657,0.470546902076653,0.676916863133412,0,0.526139422875686,0,0.561142271657738,0.355905054372522,0.29551344712669,0,0.464810523557898,0.385813221962283,0,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0.463735671240843|short_description=p29@Frmd4a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:209630 | |||
|HGNC= | |||
|MCL_coexpression_id=1442 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B1AXJ9 | |||
|association_with_transcript=19bp_to_ENSMUST00000115037_5end | |||
|cluster_id=chr2:4221954..4221977,+ | |||
|description=CAGE_peak_29_at_Frmd4a_5end | |||
|id=chr2:4221954..4221977,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002102!2.92e-07!8;UBERON:0004710!2.92e-07!8;UBERON:0005419!2.92e-07!8;UBERON:0005417!2.92e-07!8;UBERON:0005729!2.92e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010708,2.40e-18,8;UBERON:0002102,4.74e-16,7;UBERON:0004710,4.74e-16,7;UBERON:0005419,4.74e-16,7;UBERON:0005417,4.74e-16,7;UBERON:0005729,4.74e-16,7;UBERON:0000970,2.03e-12,9;UBERON:0000019,2.03e-12,9;UBERON:0000047,2.03e-12,9;UBERON:0010312,2.03e-12,9;UBERON:0004088,2.03e-12,9;UBERON:0002104,2.03e-12,9;UBERON:0001456,2.03e-12,9;UBERON:0003072,2.03e-12,9;UBERON:0004128,2.03e-12,9;UBERON:0003071,2.03e-12,9;UBERON:0000020,4.77e-12,12;UBERON:0001032,4.77e-12,12;UBERON:0004456,4.77e-12,12;UBERON:0000033,4.79e-11,13;UBERON:0005085,4.79e-11,13;UBERON:0010707,6.38e-11,13;UBERON:0001444,4.89e-10,11;UBERON:0000153,7.46e-10,43;UBERON:0000026,4.37e-09,12;UBERON:0004708,4.37e-09,12;UBERON:0002101,4.37e-09,12;UBERON:0004357,4.37e-09,12;UBERON:0004347,4.37e-09,12;UBERON:0005732,4.37e-09,12;UBERON:0005733,4.37e-09,12 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.31790010585369,0.183546752161682,0,0,0,0,0,0,0,0,0,0.514518872071894,0.573066879877513,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0.226714680320357,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0,1.03575153458869,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0.470354828542819,0,0,0,0,0.485300549842228,0.441683036920787,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0,0.203678727700633,0.248813941220186,0,0,1.56144531555244,0.919608417733892,1.80062129805349,1.80845781402858,2.65342346690179,1.66547836370305,2.52994656311268,0.258703370739016,1.72454394346274,3.59301552318857,3.69497360744293,1.97276159184817,1.39023624612799,1.39300866608867,0.823128545631774,0.796137067273973,0,0,0,0.621377317606506,0.938104239924385,1.08037236876609,1.18372367792605,0.787056926989615,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.486412857275134,0.438599962275997,0,0.671032093801859,0,0,0,0,0.853153002140936,0.464473343720877,0.644337306610467,0.201683524623343,0.22237804384487,0,0,0.658795818896044,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0,0.126473074248515,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,1.51593129416388,0.488894929326078,0.169745085775188,0.938760993154008,0,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.655453258862952,0.172684981865896,0,0,0,0.491764273019036,0,0.160550589987792,0.234423373184406,0.491804836130026,0.252470927204373,2.2085575359138,0.390438744296638,1.07711698866399,0.238968797952552,0,0,0.404810701674894,0.876767573733936,1.97643888973262,1.28528526568723,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0.604647113929502,0.565815239267694,0.885905678642318,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.540183282093931,0.517434735131018,0.643011105094777,1.24138163549592,0.535106452806212,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0.180938774784468,0.119372344003136,0,0,0.370850604021019,0.170870880797853,0.619160603889667,0.925972636848558,0,0.136694227721025,0.228778173206523,0,0,0,0,0.790839983952838,1.42323626988794,0.324016022465404,0,0.87345025498471,0.674321731924103,0.165306911450672,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0.234714477291508,0.2604087696879,0,0,0,0,0,0.205421914329655,0,0.358053391334963,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0.93841237725591,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,1.03787347584177,1.99512436700516,2.04880326904961,1.21553358534147,0,0,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.842773567228942,0.128050304809739,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0,0.685738504770831,0.177475806159338,0.715308569841963,0.290692833264657,0.470546902076653,0.676916863133412,0,0.526139422875686,0,0.561142271657738,0.355905054372522,0.29551344712669,0,0.464810523557898,0.385813221962283,0,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0.463735671240843 | |||
|short_description=p29@Frmd4a | |||
}} |
Revision as of 04:18, 5 August 2015
Short description: | p29@Frmd4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_Frmd4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1442 |
Association with transcript: | 19bp_to_ENSMUST00000115037_5end |
EntrezGene: | 209630 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pectoral complex | 2.40e-18 | 8 |
forelimb | 4.74e-16 | 7 |
pectoral appendage | 4.74e-16 | 7 |
pectoral appendage bud | 4.74e-16 | 7 |
forelimb bud | 4.74e-16 | 7 |
forelimb/pectoral fin field | 4.74e-16 | 7 |
eye | 2.03e-12 | 9 |
camera-type eye | 2.03e-12 | 9 |
simple eye | 2.03e-12 | 9 |
immature eye | 2.03e-12 | 9 |
ocular region | 2.03e-12 | 9 |
visual system | 2.03e-12 | 9 |
face | 2.03e-12 | 9 |
optic cup | 2.03e-12 | 9 |
optic vesicle | 2.03e-12 | 9 |
eye primordium | 2.03e-12 | 9 |
sense organ | 4.77e-12 | 12 |
sensory system | 4.77e-12 | 12 |
entire sense organ system | 4.77e-12 | 12 |
head | 4.79e-11 | 13 |
ectodermal placode | 4.79e-11 | 13 |
appendage girdle complex | 6.38e-11 | 13 |
subdivision of head | 4.89e-10 | 11 |
anterior region of body | 7.46e-10 | 43 |
appendage | 4.37e-09 | 12 |
paired limb/fin | 4.37e-09 | 12 |
limb | 4.37e-09 | 12 |
paired limb/fin bud | 4.37e-09 | 12 |
limb bud | 4.37e-09 | 12 |
limb/fin field | 4.37e-09 | 12 |
limb field | 4.37e-09 | 12 |