FFCP PHASE1:Mm9::chr15:30564498..30564511,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=133|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:30564498..30564511,+|id=chr15:30564498..30564511,+|ontology_enrichment_celltype=CL:0000117!9.97e-16!23;CL:0000337!9.97e-16!23;CL:0000540!1.17e-10!33;CL:0000047!1.17e-10!33;CL:0000031!1.17e-10!33;CL:0000404!1.17e-10!33;CL:0000393!3.26e-08!39;CL:0000211!3.26e-08!39;CL:0002319!5.55e-08!43;CL:0000221!1.11e-07!44;CL:0000133!1.11e-07!44|ontology_enrichment_celltype_v019_2=CL:0000120,6.33e-13,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.73e-18!71;UBERON:0003075!1.73e-18!71;UBERON:0007284!1.73e-18!71;UBERON:0000033!5.14e-18!63;UBERON:0003056!8.55e-17!49;UBERON:0001049!1.52e-16!52;UBERON:0005068!1.52e-16!52;UBERON:0006241!1.52e-16!52;UBERON:0007135!1.52e-16!52;UBERON:0001017!9.60e-16!73;UBERON:0005743!9.60e-16!73;UBERON:0004121!2.49e-15!102;UBERON:0000924!2.49e-15!102;UBERON:0006601!2.49e-15!102;UBERON:0000073!4.81e-15!75;UBERON:0001016!4.81e-15!75;UBERON:0002616!6.00e-14!49;UBERON:0000955!1.64e-13!50;UBERON:0006238!1.64e-13!50;UBERON:0002020!1.30e-12!34;UBERON:0002780!4.95e-11!39;UBERON:0001890!4.95e-11!39;UBERON:0006240!4.95e-11!39;UBERON:0003080!1.32e-10!40;UBERON:0007811!1.57e-10!86;UBERON:0000153!1.94e-10!94;UBERON:0002791!8.51e-10!29;UBERON:0003528!8.51e-10!29;UBERON:0001893!8.51e-10!29;UBERON:0000970!2.95e-08!9;UBERON:0000019!2.95e-08!9;UBERON:0000047!2.95e-08!9;UBERON:0004088!2.95e-08!9;UBERON:0002104!2.95e-08!9;UBERON:0001456!2.95e-08!9;UBERON:0003072!2.95e-08!9;UBERON:0003071!2.95e-08!9;UBERON:0004128!2.95e-08!9;UBERON:0000369!6.44e-08!5;UBERON:0002435!6.44e-08!5;UBERON:0000204!6.44e-08!5;UBERON:0010082!6.44e-08!5;UBERON:0003076!3.13e-07!12;UBERON:0003057!3.13e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.96e-16,9;UBERON:0000019,2.96e-16,9;UBERON:0000047,2.96e-16,9;UBERON:0010312,2.96e-16,9;UBERON:0004088,2.96e-16,9;UBERON:0002104,2.96e-16,9;UBERON:0001456,2.96e-16,9;UBERON:0003072,2.96e-16,9;UBERON:0004128,2.96e-16,9;UBERON:0003071,2.96e-16,9;UBERON:0001444,2.26e-13,11;UBERON:0000020,2.75e-12,12;UBERON:0001032,2.75e-12,12;UBERON:0004456,2.75e-12,12;UBERON:0000033,2.28e-11,13;UBERON:0005085,2.28e-11,13;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0003056,1.60e-08,49;UBERON:0002346,2.33e-08,64;UBERON:0003075,2.33e-08,64;UBERON:0007284,2.33e-08,64;UBERON:0010371,2.89e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.571301968807607,0.220868540951614,0.61245399607477,0.191690942036473,1.83843757322004,0,0.127687338085188,0.307213066512487,0.923204014111357,0.731901148819277,1.04182674111352,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25668024088073,0,0,0,0,0,0.457500602818626,0.502617408451458,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0.650602214813519,3.21862946206862,3.96136685571768,1.9591626318643,1.7009124787832,0.640568601424249,0.374806898238915,0,0.431135985865684,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0.469380496577004,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,1.37016503954128,0,0,0,0,0,0.518936737920883,0.798049746802062,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.952587382566147,0.347652977834566,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0|short_description=p@chr15:30564498..30564511,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=133 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:30564498..30564511,+ | |||
|description=CAGE_peak_at_chr15:30564498..30564511,+ | |||
|id=chr15:30564498..30564511,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.97e-16!23;CL:0000337!9.97e-16!23;CL:0000540!1.17e-10!33;CL:0000047!1.17e-10!33;CL:0000031!1.17e-10!33;CL:0000404!1.17e-10!33;CL:0000393!3.26e-08!39;CL:0000211!3.26e-08!39;CL:0002319!5.55e-08!43;CL:0000221!1.11e-07!44;CL:0000133!1.11e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,6.33e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.73e-18!71;UBERON:0003075!1.73e-18!71;UBERON:0007284!1.73e-18!71;UBERON:0000033!5.14e-18!63;UBERON:0003056!8.55e-17!49;UBERON:0001049!1.52e-16!52;UBERON:0005068!1.52e-16!52;UBERON:0006241!1.52e-16!52;UBERON:0007135!1.52e-16!52;UBERON:0001017!9.60e-16!73;UBERON:0005743!9.60e-16!73;UBERON:0004121!2.49e-15!102;UBERON:0000924!2.49e-15!102;UBERON:0006601!2.49e-15!102;UBERON:0000073!4.81e-15!75;UBERON:0001016!4.81e-15!75;UBERON:0002616!6.00e-14!49;UBERON:0000955!1.64e-13!50;UBERON:0006238!1.64e-13!50;UBERON:0002020!1.30e-12!34;UBERON:0002780!4.95e-11!39;UBERON:0001890!4.95e-11!39;UBERON:0006240!4.95e-11!39;UBERON:0003080!1.32e-10!40;UBERON:0007811!1.57e-10!86;UBERON:0000153!1.94e-10!94;UBERON:0002791!8.51e-10!29;UBERON:0003528!8.51e-10!29;UBERON:0001893!8.51e-10!29;UBERON:0000970!2.95e-08!9;UBERON:0000019!2.95e-08!9;UBERON:0000047!2.95e-08!9;UBERON:0004088!2.95e-08!9;UBERON:0002104!2.95e-08!9;UBERON:0001456!2.95e-08!9;UBERON:0003072!2.95e-08!9;UBERON:0003071!2.95e-08!9;UBERON:0004128!2.95e-08!9;UBERON:0000369!6.44e-08!5;UBERON:0002435!6.44e-08!5;UBERON:0000204!6.44e-08!5;UBERON:0010082!6.44e-08!5;UBERON:0003076!3.13e-07!12;UBERON:0003057!3.13e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.96e-16,9;UBERON:0000019,2.96e-16,9;UBERON:0000047,2.96e-16,9;UBERON:0010312,2.96e-16,9;UBERON:0004088,2.96e-16,9;UBERON:0002104,2.96e-16,9;UBERON:0001456,2.96e-16,9;UBERON:0003072,2.96e-16,9;UBERON:0004128,2.96e-16,9;UBERON:0003071,2.96e-16,9;UBERON:0001444,2.26e-13,11;UBERON:0000020,2.75e-12,12;UBERON:0001032,2.75e-12,12;UBERON:0004456,2.75e-12,12;UBERON:0000033,2.28e-11,13;UBERON:0005085,2.28e-11,13;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0003056,1.60e-08,49;UBERON:0002346,2.33e-08,64;UBERON:0003075,2.33e-08,64;UBERON:0007284,2.33e-08,64;UBERON:0010371,2.89e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.571301968807607,0.220868540951614,0.61245399607477,0.191690942036473,1.83843757322004,0,0.127687338085188,0.307213066512487,0.923204014111357,0.731901148819277,1.04182674111352,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25668024088073,0,0,0,0,0,0.457500602818626,0.502617408451458,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0.650602214813519,3.21862946206862,3.96136685571768,1.9591626318643,1.7009124787832,0.640568601424249,0.374806898238915,0,0.431135985865684,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0.469380496577004,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,1.37016503954128,0,0,0,0,0,0.518936737920883,0.798049746802062,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.952587382566147,0.347652977834566,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr15:30564498..30564511,+ | |||
}} |
Latest revision as of 03:56, 5 August 2015
Short description: | p@chr15:30564498..30564511, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:30564498..30564511, + |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 6.33e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 2.96e-16 | 9 |
camera-type eye | 2.96e-16 | 9 |
simple eye | 2.96e-16 | 9 |
immature eye | 2.96e-16 | 9 |
ocular region | 2.96e-16 | 9 |
visual system | 2.96e-16 | 9 |
face | 2.96e-16 | 9 |
optic cup | 2.96e-16 | 9 |
optic vesicle | 2.96e-16 | 9 |
eye primordium | 2.96e-16 | 9 |
subdivision of head | 2.26e-13 | 11 |
sense organ | 2.75e-12 | 12 |
sensory system | 2.75e-12 | 12 |
entire sense organ system | 2.75e-12 | 12 |
head | 2.28e-11 | 13 |
ectodermal placode | 2.28e-11 | 13 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
pre-chordal neural plate | 1.60e-08 | 49 |
neurectoderm | 2.33e-08 | 64 |
neural plate | 2.33e-08 | 64 |
presumptive neural plate | 2.33e-08 | 64 |
ecto-epithelium | 2.89e-07 | 73 |