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FFCP PHASE1:Mm9::chr9:43854810..43854849,-: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=848|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:43854810..43854849,-|id=chr9:43854810..43854849,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,3.45e-07,6;CL:0000187,3.45e-07,6;CL:0000056,3.45e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!3.49e-18!86;UBERON:0000153!7.40e-16!94;UBERON:0000955!5.18e-11!50;UBERON:0006238!5.18e-11!50;UBERON:0001049!6.81e-11!52;UBERON:0005068!6.81e-11!52;UBERON:0006241!6.81e-11!52;UBERON:0007135!6.81e-11!52;UBERON:0002616!1.30e-10!49;UBERON:0006562!1.81e-10!24;UBERON:0001557!1.81e-10!24;UBERON:0001042!1.81e-10!24;UBERON:0008814!1.81e-10!24;UBERON:0009145!1.81e-10!24;UBERON:0001017!2.81e-10!73;UBERON:0005743!2.81e-10!73;UBERON:0002370!3.53e-10!23;UBERON:0000974!3.53e-10!23;UBERON:0004807!3.53e-10!23;UBERON:0005058!3.53e-10!23;UBERON:0003351!3.53e-10!23;UBERON:0009113!3.53e-10!23;UBERON:0003295!3.53e-10!23;UBERON:0009722!3.53e-10!23;UBERON:0005562!3.53e-10!23;UBERON:0007690!3.53e-10!23;UBERON:0000073!5.64e-10!75;UBERON:0001016!5.64e-10!75;UBERON:0003408!2.07e-09!24;UBERON:0002021!3.94e-09!10;UBERON:0000411!3.94e-09!10;UBERON:0001950!3.94e-09!10;UBERON:0000033!4.29e-09!63;UBERON:0000063!4.48e-09!35;UBERON:0000064!6.87e-09!99;UBERON:0004121!1.48e-08!102;UBERON:0000924!1.48e-08!102;UBERON:0006601!1.48e-08!102;UBERON:0000072!2.26e-08!27;UBERON:0002020!2.63e-08!34;UBERON:0004177!3.01e-08!29;UBERON:0002346!9.04e-08!71;UBERON:0003075!9.04e-08!71;UBERON:0007284!9.04e-08!71;UBERON:0003080!4.70e-07!40;UBERON:0002619!5.89e-07!17;UBERON:0002791!8.62e-07!29;UBERON:0003528!8.62e-07!29;UBERON:0001893!8.62e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.28e-21,54;UBERON:0001049,9.95e-19,52;UBERON:0005068,9.95e-19,52;UBERON:0006241,9.95e-19,52;UBERON:0007135,9.95e-19,52;UBERON:0002020,4.92e-17,34;UBERON:0002021,1.98e-15,10;UBERON:0000411,1.98e-15,10;UBERON:0001950,1.98e-15,10;UBERON:0001017,2.15e-15,73;UBERON:0001016,1.00e-14,75;UBERON:0002346,1.30e-14,64;UBERON:0003075,1.30e-14,64;UBERON:0007284,1.30e-14,64;UBERON:0002616,1.37e-14,46;UBERON:0000955,3.99e-14,47;UBERON:0006238,3.99e-14,47;UBERON:0003528,9.31e-14,29;UBERON:0002791,9.31e-14,29;UBERON:0001893,9.31e-14,29;UBERON:0002370,2.18e-13,23;UBERON:0000974,2.18e-13,23;UBERON:0004807,2.18e-13,23;UBERON:0005058,2.18e-13,23;UBERON:0003351,2.18e-13,23;UBERON:0009113,2.18e-13,23;UBERON:0003295,2.18e-13,23;UBERON:0009722,2.18e-13,23;UBERON:0005562,2.18e-13,23;UBERON:0007690,2.18e-13,23;UBERON:0002619,2.49e-13,17;UBERON:0006562,1.21e-12,24;UBERON:0003408,1.21e-12,24;UBERON:0001557,1.21e-12,24;UBERON:0001042,1.21e-12,24;UBERON:0008814,1.21e-12,24;UBERON:0009145,1.21e-12,24;UBERON:0003080,5.08e-12,40;UBERON:0000956,5.38e-12,21;UBERON:0001869,5.38e-12,21;UBERON:0000203,5.38e-12,21;UBERON:0010371,9.56e-12,73;UBERON:0000483,1.25e-11,174;UBERON:0000119,2.42e-11,176;UBERON:0002780,3.90e-11,39;UBERON:0001890,3.90e-11,39;UBERON:0006240,3.90e-11,39;UBERON:0000072,9.58e-11,27;UBERON:0004121,2.17e-10,95;UBERON:0000924,2.17e-10,95;UBERON:0006601,2.17e-10,95;UBERON:0004177,1.05e-09,29;UBERON:0005057,1.05e-09,29;UBERON:0010314,1.11e-09,92;UBERON:0003056,1.25e-09,49;UBERON:0003076,6.39e-08,12;UBERON:0003057,6.39e-08,12;UBERON:0007811,6.53e-08,36;UBERON:0011216,1.50e-07,194;UBERON:0000025,1.55e-07,114;UBERON:0000077,2.51e-07,35;UBERON:0002950,5.10e-07,4;UBERON:0001891,5.10e-07,4;UBERON:0009616,5.10e-07,4;UBERON:0010286,5.10e-07,4|phase1_expression=0,0,0,0,0,0,0,1.93684985162364,2.39340827657833,0.234064526321993,1.36974374580404,0.398860794976682,2.39681021903688,2.71003247498892,0,0,0,0.473193248037357,0.548457734422955,0.84877930359606,0.935476191661768,1.39007331681239,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7697299954627,2.02753862439029,3.12029478674859,0,0.436050312760893,1.97717564461025,1.94429899074283,0.979904951377538,0,0,1.45072428402269,2.01656279485478,1.02903774414379,1.71920063963254,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,1.15265491596466,0,0,0,4.28476476605705,3.53389665522582,0,0,0,12.1127469099328,4.59674417106676,3.22573719838111,0,0,0,5.30447698102624,4.50210088025344,5.19514042441154,1.76777151284201,1.42371680799103,0,0.075726193333184,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,1.46390398505774,1.8850203613211,0,0,0,0,3.14560342750128,2.28750301409313,0.376963056338593,5.04090528557602,2.55715457330331,1.87009240103604,1.62241263067758,0.712875546952214,0,0,0,0,0,0,0,0.340182495756639,0.512454881139399,0.374806898238915,1.03481348295606,0,0,0,0,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0.393528463494808,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0.268412837520744,3.36463917702604,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=848
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr9:43854810..43854849,-
|description=CAGE_peak_at_chr9:43854810..43854849,-
|id=chr9:43854810..43854849,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000680,3.45e-07,6;CL:0000187,3.45e-07,6;CL:0000056,3.45e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!3.49e-18!86;UBERON:0000153!7.40e-16!94;UBERON:0000955!5.18e-11!50;UBERON:0006238!5.18e-11!50;UBERON:0001049!6.81e-11!52;UBERON:0005068!6.81e-11!52;UBERON:0006241!6.81e-11!52;UBERON:0007135!6.81e-11!52;UBERON:0002616!1.30e-10!49;UBERON:0006562!1.81e-10!24;UBERON:0001557!1.81e-10!24;UBERON:0001042!1.81e-10!24;UBERON:0008814!1.81e-10!24;UBERON:0009145!1.81e-10!24;UBERON:0001017!2.81e-10!73;UBERON:0005743!2.81e-10!73;UBERON:0002370!3.53e-10!23;UBERON:0000974!3.53e-10!23;UBERON:0004807!3.53e-10!23;UBERON:0005058!3.53e-10!23;UBERON:0003351!3.53e-10!23;UBERON:0009113!3.53e-10!23;UBERON:0003295!3.53e-10!23;UBERON:0009722!3.53e-10!23;UBERON:0005562!3.53e-10!23;UBERON:0007690!3.53e-10!23;UBERON:0000073!5.64e-10!75;UBERON:0001016!5.64e-10!75;UBERON:0003408!2.07e-09!24;UBERON:0002021!3.94e-09!10;UBERON:0000411!3.94e-09!10;UBERON:0001950!3.94e-09!10;UBERON:0000033!4.29e-09!63;UBERON:0000063!4.48e-09!35;UBERON:0000064!6.87e-09!99;UBERON:0004121!1.48e-08!102;UBERON:0000924!1.48e-08!102;UBERON:0006601!1.48e-08!102;UBERON:0000072!2.26e-08!27;UBERON:0002020!2.63e-08!34;UBERON:0004177!3.01e-08!29;UBERON:0002346!9.04e-08!71;UBERON:0003075!9.04e-08!71;UBERON:0007284!9.04e-08!71;UBERON:0003080!4.70e-07!40;UBERON:0002619!5.89e-07!17;UBERON:0002791!8.62e-07!29;UBERON:0003528!8.62e-07!29;UBERON:0001893!8.62e-07!29
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|phase1_expression=0,0,0,0,0,0,0,1.93684985162364,2.39340827657833,0.234064526321993,1.36974374580404,0.398860794976682,2.39681021903688,2.71003247498892,0,0,0,0.473193248037357,0.548457734422955,0.84877930359606,0.935476191661768,1.39007331681239,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7697299954627,2.02753862439029,3.12029478674859,0,0.436050312760893,1.97717564461025,1.94429899074283,0.979904951377538,0,0,1.45072428402269,2.01656279485478,1.02903774414379,1.71920063963254,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,1.15265491596466,0,0,0,4.28476476605705,3.53389665522582,0,0,0,12.1127469099328,4.59674417106676,3.22573719838111,0,0,0,5.30447698102624,4.50210088025344,5.19514042441154,1.76777151284201,1.42371680799103,0,0.075726193333184,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,1.46390398505774,1.8850203613211,0,0,0,0,3.14560342750128,2.28750301409313,0.376963056338593,5.04090528557602,2.55715457330331,1.87009240103604,1.62241263067758,0.712875546952214,0,0,0,0,0,0,0,0.340182495756639,0.512454881139399,0.374806898238915,1.03481348295606,0,0,0,0,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0.393528463494808,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0.268412837520744,3.36463917702604,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65596710964597,2.69586879162067,1.47541450839008,0.252470927204373,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0.963963949265421,0,1.06839362200353,0.81443479676788,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,1.06949213515416,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.322928853391811,0.241251699712623,0.596861720015682,0.656563598980245,0.291480836629851,2.59595422814714,0.170870880797853,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0.523511883968059,0,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,5.37218905067903,0.405450430580328,0.616265742988964,3.37794139742267,1.43221356533985,3.17890167650024,4.80781798079875,3.98761723371358,3.83672509802961,4.49620159264499,3.7305688500631,6.1398464866044,5.09922760693746,5.14258369598903,0.453460767230423,0,0,0,0,0,0.183151624267265,0,0,1.6942555278512,5.52390283808612,3.43737308063638,12.5452823110892,4.11049511862385,8.3093328712867,6.75022500231806,4.5032120322422,4.07828168085784,6.21312374102184,0,0,0,0,0,0.919217542250071,0,0,0,0,0,0,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0,0.263069711437843,0,0,0,0.394017929502254,0.409231043169689,0,0.192906610981141,0.749431733813838,0,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p@chr9:43854810..43854849,-
}}

Latest revision as of 03:29, 5 August 2015

Short description:p@chr9:43854810..43854849, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:43854810..43854849, -
Coexpression cluster:MCL_coexpression_mm9:848
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr9:43854810..43854849-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C73.99
thymus, neonate N06.CNhs11197.681-26C43.84
thymus, neonate N07.CNhs11211.713-19D34.50
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A26.14
thymus, neonate N25.CNhs11125.1362-25G75.10
thymus, neonate N30.CNhs11132.1393-42G25.14
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
muscle precursor cell3.45e-076
muscle cell3.45e-076
myoblast3.45e-076

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.28e-2154
neural tube9.95e-1952
neural rod9.95e-1952
future spinal cord9.95e-1952
neural keel9.95e-1952
gray matter4.92e-1734
occipital lobe1.98e-1510
visual cortex1.98e-1510
neocortex1.98e-1510
central nervous system2.15e-1573
nervous system1.00e-1475
neurectoderm1.30e-1464
neural plate1.30e-1464
presumptive neural plate1.30e-1464
regional part of brain1.37e-1446
brain3.99e-1447
future brain3.99e-1447
brain grey matter9.31e-1429
regional part of telencephalon9.31e-1429
telencephalon9.31e-1429
thymus2.18e-1323
neck2.18e-1323
respiratory system epithelium2.18e-1323
hemolymphoid system gland2.18e-1323
pharyngeal epithelium2.18e-1323
thymic region2.18e-1323
pharyngeal gland2.18e-1323
entire pharyngeal arch endoderm2.18e-1323
thymus primordium2.18e-1323
early pharyngeal endoderm2.18e-1323
regional part of cerebral cortex2.49e-1317
pharynx1.21e-1224
gland of gut1.21e-1224
upper respiratory tract1.21e-1224
chordate pharynx1.21e-1224
pharyngeal arch system1.21e-1224
pharyngeal region of foregut1.21e-1224
anterior neural tube5.08e-1240
cerebral cortex5.38e-1221
cerebral hemisphere5.38e-1221
pallium5.38e-1221
ecto-epithelium9.56e-1273
epithelium1.25e-11174
cell layer2.42e-11176
regional part of forebrain3.90e-1139
forebrain3.90e-1139
future forebrain3.90e-1139
segment of respiratory tract9.58e-1127
ectoderm-derived structure2.17e-1095
ectoderm2.17e-1095
presumptive ectoderm2.17e-1095
hemopoietic organ1.05e-0929
immune organ1.05e-0929
structure with developmental contribution from neural crest1.11e-0992
pre-chordal neural plate1.25e-0949
posterior neural tube6.39e-0812
chordal neural plate6.39e-0812
craniocervical region6.53e-0836
organ system subdivision1.50e-07194
tube1.55e-07114
mixed endoderm/mesoderm-derived structure2.51e-0735
regional part of midbrain5.10e-074
midbrain5.10e-074
presumptive midbrain5.10e-074
midbrain neural tube5.10e-074
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