FFCP PHASE1:Mm9::chr17:56092167..56092181,+: Difference between revisions
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{{FFCP|EntrezGene=50498|HGNC=|MCL_coexpression_id=193|UniProt=O35228,Q3U1K3|association_with_transcript=121bp_to_ENSMUST00000003274,NM_015766,uc008daj.1_5end|description=CAGE_peak_2_at_Ebi3_5end|id=chr17:56092167..56092181,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,1.30e-17,4;CL:0000766,1.30e-17,4;CL:0000234,1.30e-17,4;CL:0000576,1.30e-17,4;CL:0000235,1.30e-17,4;CL:0000864,1.30e-17,4;CL:0002009,1.30e-17,4;CL:0000040,1.30e-17,4;CL:0000559,1.30e-17,4;CL:0000557,4.36e-15,7;CL:0002092,6.61e-14,3;CL:0002540,6.61e-14,3;CL:0000473,3.88e-10,7;CL:0000049,4.70e-10,19;CL:0002476,5.51e-10,2;CL:0000878,2.67e-09,2;CL:0000129,2.67e-09,2;CL:0000034,1.35e-08,97;CL:0002320,1.03e-07,46;CL:0000134,1.03e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.29e-14,3;DOID:4045,3.29e-14,3;DOID:0050686,2.49e-07,6|ontology_enrichment_uberon=UBERON:0001474!2.92e-07!22;UBERON:0004765!2.92e-07!22;UBERON:0001434!2.92e-07!22;UBERON:0002390!3.01e-07!45;UBERON:0003061!3.01e-07!45;UBERON:0002405!3.59e-07!70;UBERON:0002193!5.29e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.96e-16,16;UBERON:0002204,8.96e-15,32;UBERON:0001474,1.55e-11,22;UBERON:0004765,1.55e-11,22;UBERON:0001434,1.55e-11,22;UBERON:0002384,1.03e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0.157731082679119,0.411343300817216,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,14.2300754450549,12.5013655123808,7.32933241563318,19.9998705930545,10.9287277593351,4.36959317728038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.54904731417329,10.8775299882367,5.6838409195688,1.79760066311043,2.68952813725088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0.23517741427141,0.251333182659351,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,1.1981512450592,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0.696504333044333,0,0.199034266818493,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.439100230582101,0,0,0,0,0.528901133327089,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.280543279561274,0,0,0.31399745568275,0.246794327843601,0,0.166845105716094,0.393117990226406,0.449724224769707,0,0.241177159752417,0.25462585178142,1.15078454980324,0.810676133875177,0,0,0,0,0.757736633841335,0.179397413521912,0,0,0,0.488894929326078,0,0,0,0,0.585400943573396,0,0,0,0,0.518054945597687,0.144649058581512,4.52373851817817,28.2830955585729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0.656563598980245,0.291480836629851,0,0.341741761595705,0.619160603889667,1.85194527369712,0.565105371014073,0.136694227721025,0.457556346413045,1.01987057996313,2.09927178485487,1.24379976423981,0,0,0,0,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0.15241361331,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0,0,0.192075457214608,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p2@Ebi3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50498 | |||
|HGNC= | |||
|MCL_coexpression_id=193 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35228,uniprot:Q3U1K3 | |||
|association_with_transcript=121bp_to_ENSMUST00000003274,NM_015766,uc008daj.1_5end | |||
|cluster_id=chr17:56092167..56092181,+ | |||
|description=CAGE_peak_2_at_Ebi3_5end | |||
|id=chr17:56092167..56092181,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.30e-17,4;CL:0000766,1.30e-17,4;CL:0000234,1.30e-17,4;CL:0000576,1.30e-17,4;CL:0000235,1.30e-17,4;CL:0000864,1.30e-17,4;CL:0002009,1.30e-17,4;CL:0000040,1.30e-17,4;CL:0000559,1.30e-17,4;CL:0000557,4.36e-15,7;CL:0002092,6.61e-14,3;CL:0002540,6.61e-14,3;CL:0000473,3.88e-10,7;CL:0000049,4.70e-10,19;CL:0002476,5.51e-10,2;CL:0000878,2.67e-09,2;CL:0000129,2.67e-09,2;CL:0000034,1.35e-08,97;CL:0002320,1.03e-07,46;CL:0000134,1.03e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.29e-14,3;DOID:4045,3.29e-14,3;DOID:0050686,2.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001474!2.92e-07!22;UBERON:0004765!2.92e-07!22;UBERON:0001434!2.92e-07!22;UBERON:0002390!3.01e-07!45;UBERON:0003061!3.01e-07!45;UBERON:0002405!3.59e-07!70;UBERON:0002193!5.29e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.96e-16,16;UBERON:0002204,8.96e-15,32;UBERON:0001474,1.55e-11,22;UBERON:0004765,1.55e-11,22;UBERON:0001434,1.55e-11,22;UBERON:0002384,1.03e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0.157731082679119,0.411343300817216,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,14.2300754450549,12.5013655123808,7.32933241563318,19.9998705930545,10.9287277593351,4.36959317728038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.54904731417329,10.8775299882367,5.6838409195688,1.79760066311043,2.68952813725088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0.23517741427141,0.251333182659351,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,1.1981512450592,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0.696504333044333,0,0.199034266818493,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.439100230582101,0,0,0,0,0.528901133327089,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.280543279561274,0,0,0.31399745568275,0.246794327843601,0,0.166845105716094,0.393117990226406,0.449724224769707,0,0.241177159752417,0.25462585178142,1.15078454980324,0.810676133875177,0,0,0,0,0.757736633841335,0.179397413521912,0,0,0,0.488894929326078,0,0,0,0,0.585400943573396,0,0,0,0,0.518054945597687,0.144649058581512,4.52373851817817,28.2830955585729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0.656563598980245,0.291480836629851,0,0.341741761595705,0.619160603889667,1.85194527369712,0.565105371014073,0.136694227721025,0.457556346413045,1.01987057996313,2.09927178485487,1.24379976423981,0,0,0,0,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0.15241361331,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0,0,0.192075457214608,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p2@Ebi3 | |||
}} |
Revision as of 02:55, 5 August 2015
Short description: | p2@Ebi3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ebi3_5end |
Coexpression cluster: | MCL_coexpression_mm9:193 |
Association with transcript: | 121bp_to_ENSMUST00000003274, NM_015766, uc008daj.1_5end |
EntrezGene: | 50498 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.30e-17 | 4 |
myeloid leukocyte | 1.30e-17 | 4 |
phagocyte | 1.30e-17 | 4 |
monocyte | 1.30e-17 | 4 |
macrophage | 1.30e-17 | 4 |
tissue-resident macrophage | 1.30e-17 | 4 |
macrophage dendritic cell progenitor | 1.30e-17 | 4 |
monoblast | 1.30e-17 | 4 |
promonocyte | 1.30e-17 | 4 |
granulocyte monocyte progenitor cell | 4.36e-15 | 7 |
bone marrow cell | 6.61e-14 | 3 |
mesenchymal stem cell of the bone marrow | 6.61e-14 | 3 |
defensive cell | 3.88e-10 | 7 |
common myeloid progenitor | 4.70e-10 | 19 |
bone marrow macrophage | 5.51e-10 | 2 |
central nervous system macrophage | 2.67e-09 | 2 |
microglial cell | 2.67e-09 | 2 |
stem cell | 1.35e-08 | 97 |
connective tissue cell | 1.03e-07 | 46 |
mesenchymal cell | 1.03e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.96e-16 | 16 |
musculoskeletal system | 8.96e-15 | 32 |
bone element | 1.55e-11 | 22 |
skeletal element | 1.55e-11 | 22 |
skeletal system | 1.55e-11 | 22 |
connective tissue | 1.03e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.29e-14 | 3 |
muscle cancer | 3.29e-14 | 3 |
organ system cancer | 2.49e-07 | 6 |