FFCP PHASE1:Mm9::chr4:141157583..141157590,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=410|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:141157583..141157590,-|id=chr4:141157583..141157590,-|ontology_enrichment_celltype=CL:0002563!3.73e-14!9;CL:0002251!3.73e-14!9;CL:0002076!3.14e-13!15;CL:0000066!1.64e-12!25;CL:0000075!7.45e-11!7;CL:0000239!3.28e-10!6;CL:0000677!3.28e-10!6;CL:0000212!3.28e-10!6;CL:0000584!3.28e-10!6;CL:0000223!4.39e-09!20|ontology_enrichment_celltype_v019_2=CL:0002563,5.44e-26,9;CL:0002251,5.44e-26,9;CL:0000239,2.51e-18,6;CL:0000677,2.51e-18,6;CL:0000584,2.51e-18,6;CL:0002076,3.57e-18,15;CL:0000075,1.29e-15,7;CL:0000066,3.73e-15,25;CL:0000223,3.69e-13,20;CL:0002250,3.08e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.20e-22!15;UBERON:0001242!8.99e-20!13;UBERON:0000060!8.99e-20!13;UBERON:0001262!8.99e-20!13;UBERON:0004786!8.99e-20!13;UBERON:0000160!4.23e-16!43;UBERON:0005409!1.61e-15!59;UBERON:0003350!3.73e-14!9;UBERON:0004808!3.73e-14!9;UBERON:0001277!3.73e-14!9;UBERON:0000485!3.23e-13!11;UBERON:0004923!2.22e-12!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.48e-42,15;UBERON:0001242,6.08e-37,13;UBERON:0001262,6.08e-37,13;UBERON:0004786,6.08e-37,13;UBERON:0003350,5.44e-26,9;UBERON:0004808,5.44e-26,9;UBERON:0001277,5.44e-26,9;UBERON:0004923,2.22e-25,24;UBERON:0000160,2.67e-24,31;UBERON:0000485,5.63e-21,11;UBERON:0005409,6.07e-17,47;UBERON:0000331,2.53e-09,3;UBERON:0002116,2.53e-09,3;UBERON:0001204,2.53e-09,3;UBERON:0001168,2.53e-09,3;UBERON:0001007,6.76e-08,116;UBERON:0001555,6.76e-08,116;UBERON:0007026,6.76e-08,116;UBERON:0004119,1.10e-07,118;UBERON:0000925,1.10e-07,118;UBERON:0006595,1.10e-07,118;UBERON:0002108,4.30e-07,4;UBERON:0001962,4.94e-07,2;UBERON:0001961,4.94e-07,2;UBERON:0001744,4.94e-07,2|phase1_expression=0,2.44282785347553,2.72999543633722,1.81478526784098,3.00537437967808,2.68606835059024,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,3.44113921600755,0.57423196411502,3.4460959692726,3.878482188346,2.66032787238923,1.76421090831952,1.55211357458713,0,0,0,1.44425809875637,2.1610503896604,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0.22836775943812,0,0,0,0,0,0,0,0,0,1.3013942122792,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,1.97000956894914,1.62137619091711,1.75439984910399,1.53685080703735,1.20785776884335,0.210289948564127,0,3.96502539580558,0.528901133327089,0,0,0,0,0,0.190225626112559,1.42358718463353,0.494096864172033,1.25667604400135,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,5.72802370809068,0,0,0,0,0.436725127492355,0.269728692769641,0.826534557253359,0,0.648074866458964,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr4:141157583..141157590,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=410 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:141157583..141157590,- | |||
|description=CAGE_peak_at_chr4:141157583..141157590,- | |||
|id=chr4:141157583..141157590,- | |||
|ontology_enrichment_celltype=CL:0002563!3.73e-14!9;CL:0002251!3.73e-14!9;CL:0002076!3.14e-13!15;CL:0000066!1.64e-12!25;CL:0000075!7.45e-11!7;CL:0000239!3.28e-10!6;CL:0000677!3.28e-10!6;CL:0000212!3.28e-10!6;CL:0000584!3.28e-10!6;CL:0000223!4.39e-09!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.44e-26,9;CL:0002251,5.44e-26,9;CL:0000239,2.51e-18,6;CL:0000677,2.51e-18,6;CL:0000584,2.51e-18,6;CL:0002076,3.57e-18,15;CL:0000075,1.29e-15,7;CL:0000066,3.73e-15,25;CL:0000223,3.69e-13,20;CL:0002250,3.08e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.20e-22!15;UBERON:0001242!8.99e-20!13;UBERON:0000060!8.99e-20!13;UBERON:0001262!8.99e-20!13;UBERON:0004786!8.99e-20!13;UBERON:0000160!4.23e-16!43;UBERON:0005409!1.61e-15!59;UBERON:0003350!3.73e-14!9;UBERON:0004808!3.73e-14!9;UBERON:0001277!3.73e-14!9;UBERON:0000485!3.23e-13!11;UBERON:0004923!2.22e-12!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.48e-42,15;UBERON:0001242,6.08e-37,13;UBERON:0001262,6.08e-37,13;UBERON:0004786,6.08e-37,13;UBERON:0003350,5.44e-26,9;UBERON:0004808,5.44e-26,9;UBERON:0001277,5.44e-26,9;UBERON:0004923,2.22e-25,24;UBERON:0000160,2.67e-24,31;UBERON:0000485,5.63e-21,11;UBERON:0005409,6.07e-17,47;UBERON:0000331,2.53e-09,3;UBERON:0002116,2.53e-09,3;UBERON:0001204,2.53e-09,3;UBERON:0001168,2.53e-09,3;UBERON:0001007,6.76e-08,116;UBERON:0001555,6.76e-08,116;UBERON:0007026,6.76e-08,116;UBERON:0004119,1.10e-07,118;UBERON:0000925,1.10e-07,118;UBERON:0006595,1.10e-07,118;UBERON:0002108,4.30e-07,4;UBERON:0001962,4.94e-07,2;UBERON:0001961,4.94e-07,2;UBERON:0001744,4.94e-07,2 | |||
|phase1_expression=0,2.44282785347553,2.72999543633722,1.81478526784098,3.00537437967808,2.68606835059024,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,3.44113921600755,0.57423196411502,3.4460959692726,3.878482188346,2.66032787238923,1.76421090831952,1.55211357458713,0,0,0,1.44425809875637,2.1610503896604,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0.22836775943812,0,0,0,0,0,0,0,0,0,1.3013942122792,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,1.97000956894914,1.62137619091711,1.75439984910399,1.53685080703735,1.20785776884335,0.210289948564127,0,3.96502539580558,0.528901133327089,0,0,0,0,0,0.190225626112559,1.42358718463353,0.494096864172033,1.25667604400135,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,5.72802370809068,0,0,0,0,0.436725127492355,0.269728692769641,0.826534557253359,0,0.648074866458964,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr4:141157583..141157590,- | |||
}} |
Latest revision as of 02:29, 5 August 2015
Short description: | p@chr4:141157583..141157590, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:141157583..141157590, - |
Coexpression cluster: | MCL_coexpression_mm9:410 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.44e-26 | 9 |
epithelial cell of alimentary canal | 5.44e-26 | 9 |
brush border epithelial cell | 2.51e-18 | 6 |
gut absorptive cell | 2.51e-18 | 6 |
enterocyte | 2.51e-18 | 6 |
endo-epithelial cell | 3.57e-18 | 15 |
columnar/cuboidal epithelial cell | 1.29e-15 | 7 |
epithelial cell | 3.73e-15 | 25 |
endodermal cell | 3.69e-13 | 20 |
intestinal crypt stem cell | 3.08e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.48e-42 | 15 |
intestinal mucosa | 6.08e-37 | 13 |
wall of intestine | 6.08e-37 | 13 |
gastrointestinal system mucosa | 6.08e-37 | 13 |
epithelium of mucosa | 5.44e-26 | 9 |
gastrointestinal system epithelium | 5.44e-26 | 9 |
intestinal epithelium | 5.44e-26 | 9 |
organ component layer | 2.22e-25 | 24 |
intestine | 2.67e-24 | 31 |
simple columnar epithelium | 5.63e-21 | 11 |
gastrointestinal system | 6.07e-17 | 47 |
ileal mucosa | 2.53e-09 | 3 |
ileum | 2.53e-09 | 3 |
mucosa of small intestine | 2.53e-09 | 3 |
wall of small intestine | 2.53e-09 | 3 |
digestive system | 6.76e-08 | 116 |
digestive tract | 6.76e-08 | 116 |
primitive gut | 6.76e-08 | 116 |
endoderm-derived structure | 1.10e-07 | 118 |
endoderm | 1.10e-07 | 118 |
presumptive endoderm | 1.10e-07 | 118 |
small intestine | 4.30e-07 | 4 |
gut-associated lymphoid tissue | 4.94e-07 | 2 |
mucosa-associated lymphoid tissue | 4.94e-07 | 2 |
lymphoid tissue | 4.94e-07 | 2 |