FFCP PHASE1:Mm9::chr10:94013659..94013679,+: Difference between revisions
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{{FFCP|EntrezGene=319880|HGNC=|MCL_coexpression_id=12|UniProt=Q8R310|association_with_transcript=42bp_to_ENSMUST00000117460_5end|description=CAGE_peak_6_at_Tmcc3_5end|id=chr10:94013659..94013679,+|ontology_enrichment_celltype=CL:0002563!1.75e-07!9;CL:0002251!1.75e-07!9;CL:0000075!5.84e-07!7;CL:0000239!9.08e-07!6;CL:0000677!9.08e-07!6;CL:0000212!9.08e-07!6;CL:0000584!9.08e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,1.13e-12,6;CL:0000677,1.13e-12,6;CL:0000584,1.13e-12,6;CL:0000075,1.00e-10,7;CL:0002563,3.94e-08,9;CL:0002251,3.94e-08,9;CL:0000682,2.57e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.99e-15!43;UBERON:0005409!2.75e-13!59;UBERON:0000344!2.43e-12!15;UBERON:0001242!8.80e-11!13;UBERON:0000060!8.80e-11!13;UBERON:0001262!8.80e-11!13;UBERON:0004786!8.80e-11!13;UBERON:0004923!3.07e-08!24;UBERON:0003350!1.75e-07!9;UBERON:0004808!1.75e-07!9;UBERON:0001277!1.75e-07!9;UBERON:0000485!9.92e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-32,31;UBERON:0005409,9.06e-23,47;UBERON:0000344,9.22e-18,15;UBERON:0001242,1.39e-14,13;UBERON:0001262,1.39e-14,13;UBERON:0004786,1.39e-14,13;UBERON:0004923,8.29e-12,24;UBERON:0002108,2.56e-08,4;UBERON:0003350,3.94e-08,9;UBERON:0004808,3.94e-08,9;UBERON:0001277,3.94e-08,9;UBERON:0001007,4.89e-08,116;UBERON:0001555,4.89e-08,116;UBERON:0007026,4.89e-08,116;UBERON:0004119,8.87e-08,118;UBERON:0000925,8.87e-08,118;UBERON:0006595,8.87e-08,118;UBERON:0004921,9.45e-07,114|phase1_expression=0,10.8182376368202,8.18998630901165,9.37639055051173,13.5241847085514,6.5472916045637,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,6.07971206614945,4.5881856213434,6.89078356938024,11.1998119001359,12.7128027284675,5.51067916423484,6.5527833737582,5.54326276638262,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,2.20231761998777,1.0214987046815,1.38245879930619,0.131886287730194,0,0,0.837548997004143,0.56276261003168,2.59757021220577,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0.865964164044856,0,1.01104889002957,0.79928715803342,0,0,0,0,0.230615497256059,0,0,0,5.93267922562497,0.289198713839823,0,0,0,0,9.31958806090611,0.585561594023094,0.628340120440365,9.96282515313506,0,0,0,2.84602214869163,0.915001205637253,0,0.695297280769106,0.511430914660661,2.28566849015516,1.94689515681309,0,0.124406970610093,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.136072998302656,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,1.05144974282064,0,12.8863325363681,8.19796756656987,0,0,0.515469845288373,0.201683524623343,1.11189021922435,1.71203063501303,7.11793592316767,4.28217282282428,5.02670417600539,2.38747766449381,3.50935356814416,9.88701349519644,8.86166004486246,7.56736838366595,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,4.65596710964597,2.93029216480508,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,1.55056975900933,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.322928853391811,0,0,0.164140899745061,6.99554007911642,3.52308073819968,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0.954670618015114,0,0,0,0,0.87345025498471,0.269728692769641,0.826534557253359,1.04702376793612,1.42576470620972,0,0,0.149516546043979,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.618105171716683,0.64183841918363,0.252697211763798,0,0.188626341386076,0.37456602987953,0.256100609619477,0.0574354689556133,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0.429742108096597,0,0.220591419119515,0.463735671240843|short_description=p6@Tmcc3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319880 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R310 | |||
|association_with_transcript=42bp_to_ENSMUST00000117460_5end | |||
|cluster_id=chr10:94013659..94013679,+ | |||
|description=CAGE_peak_6_at_Tmcc3_5end | |||
|id=chr10:94013659..94013679,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.75e-07!9;CL:0002251!1.75e-07!9;CL:0000075!5.84e-07!7;CL:0000239!9.08e-07!6;CL:0000677!9.08e-07!6;CL:0000212!9.08e-07!6;CL:0000584!9.08e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.13e-12,6;CL:0000677,1.13e-12,6;CL:0000584,1.13e-12,6;CL:0000075,1.00e-10,7;CL:0002563,3.94e-08,9;CL:0002251,3.94e-08,9;CL:0000682,2.57e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.99e-15!43;UBERON:0005409!2.75e-13!59;UBERON:0000344!2.43e-12!15;UBERON:0001242!8.80e-11!13;UBERON:0000060!8.80e-11!13;UBERON:0001262!8.80e-11!13;UBERON:0004786!8.80e-11!13;UBERON:0004923!3.07e-08!24;UBERON:0003350!1.75e-07!9;UBERON:0004808!1.75e-07!9;UBERON:0001277!1.75e-07!9;UBERON:0000485!9.92e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-32,31;UBERON:0005409,9.06e-23,47;UBERON:0000344,9.22e-18,15;UBERON:0001242,1.39e-14,13;UBERON:0001262,1.39e-14,13;UBERON:0004786,1.39e-14,13;UBERON:0004923,8.29e-12,24;UBERON:0002108,2.56e-08,4;UBERON:0003350,3.94e-08,9;UBERON:0004808,3.94e-08,9;UBERON:0001277,3.94e-08,9;UBERON:0001007,4.89e-08,116;UBERON:0001555,4.89e-08,116;UBERON:0007026,4.89e-08,116;UBERON:0004119,8.87e-08,118;UBERON:0000925,8.87e-08,118;UBERON:0006595,8.87e-08,118;UBERON:0004921,9.45e-07,114 | |||
|phase1_expression=0,10.8182376368202,8.18998630901165,9.37639055051173,13.5241847085514,6.5472916045637,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,6.07971206614945,4.5881856213434,6.89078356938024,11.1998119001359,12.7128027284675,5.51067916423484,6.5527833737582,5.54326276638262,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,2.20231761998777,1.0214987046815,1.38245879930619,0.131886287730194,0,0,0.837548997004143,0.56276261003168,2.59757021220577,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0.865964164044856,0,1.01104889002957,0.79928715803342,0,0,0,0,0.230615497256059,0,0,0,5.93267922562497,0.289198713839823,0,0,0,0,9.31958806090611,0.585561594023094,0.628340120440365,9.96282515313506,0,0,0,2.84602214869163,0.915001205637253,0,0.695297280769106,0.511430914660661,2.28566849015516,1.94689515681309,0,0.124406970610093,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.136072998302656,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,1.05144974282064,0,12.8863325363681,8.19796756656987,0,0,0.515469845288373,0.201683524623343,1.11189021922435,1.71203063501303,7.11793592316767,4.28217282282428,5.02670417600539,2.38747766449381,3.50935356814416,9.88701349519644,8.86166004486246,7.56736838366595,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,4.65596710964597,2.93029216480508,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,1.55056975900933,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.322928853391811,0,0,0.164140899745061,6.99554007911642,3.52308073819968,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0.954670618015114,0,0,0,0,0.87345025498471,0.269728692769641,0.826534557253359,1.04702376793612,1.42576470620972,0,0,0.149516546043979,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.618105171716683,0.64183841918363,0.252697211763798,0,0.188626341386076,0.37456602987953,0.256100609619477,0.0574354689556133,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0.429742108096597,0,0.220591419119515,0.463735671240843 | |||
|short_description=p6@Tmcc3 | |||
}} |
Revision as of 01:25, 5 August 2015
Short description: | p6@Tmcc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tmcc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 42bp_to_ENSMUST00000117460_5end |
EntrezGene: | 319880 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.13e-12 | 6 |
gut absorptive cell | 1.13e-12 | 6 |
enterocyte | 1.13e-12 | 6 |
columnar/cuboidal epithelial cell | 1.00e-10 | 7 |
intestinal epithelial cell | 3.94e-08 | 9 |
epithelial cell of alimentary canal | 3.94e-08 | 9 |
M cell of gut | 2.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.09e-32 | 31 |
gastrointestinal system | 9.06e-23 | 47 |
mucosa | 9.22e-18 | 15 |
intestinal mucosa | 1.39e-14 | 13 |
wall of intestine | 1.39e-14 | 13 |
gastrointestinal system mucosa | 1.39e-14 | 13 |
organ component layer | 8.29e-12 | 24 |
small intestine | 2.56e-08 | 4 |
epithelium of mucosa | 3.94e-08 | 9 |
gastrointestinal system epithelium | 3.94e-08 | 9 |
intestinal epithelium | 3.94e-08 | 9 |
digestive system | 4.89e-08 | 116 |
digestive tract | 4.89e-08 | 116 |
primitive gut | 4.89e-08 | 116 |
endoderm-derived structure | 8.87e-08 | 118 |
endoderm | 8.87e-08 | 118 |
presumptive endoderm | 8.87e-08 | 118 |
subdivision of digestive tract | 9.45e-07 | 114 |