FFCP PHASE1:Mm9::chr9:28210880..28210924,+: Difference between revisions
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{{FFCP|EntrezGene=330908|HGNC=|MCL_coexpression_id=2|UniProt=Q8BMT5|association_with_transcript=146bp_to_ENSMUST00000133142,uc009oqs.1_5end|description=CAGE_peak_3_at_Opcml_5end|id=chr9:28210880..28210924,+|ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0000540!5.69e-08!33;CL:0000047!5.69e-08!33;CL:0000031!5.69e-08!33;CL:0000404!5.69e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.79e-15,23;CL:0000337,3.79e-15,23;CL:0000540,3.30e-09,33;CL:0000047,3.30e-09,33;CL:0000031,3.30e-09,33;CL:0000404,3.30e-09,33;CL:0000393,3.76e-07,39;CL:0000211,3.76e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.20e-19!34;UBERON:0001049!6.45e-19!52;UBERON:0005068!6.45e-19!52;UBERON:0006241!6.45e-19!52;UBERON:0007135!6.45e-19!52;UBERON:0000955!2.35e-17!50;UBERON:0006238!2.35e-17!50;UBERON:0002616!1.23e-16!49;UBERON:0002346!3.59e-16!71;UBERON:0003075!3.59e-16!71;UBERON:0007284!3.59e-16!71;UBERON:0000033!4.80e-16!63;UBERON:0000073!7.18e-16!75;UBERON:0001016!7.18e-16!75;UBERON:0001017!8.05e-16!73;UBERON:0005743!8.05e-16!73;UBERON:0002791!8.77e-16!29;UBERON:0003528!8.77e-16!29;UBERON:0001893!8.77e-16!29;UBERON:0003056!4.69e-14!49;UBERON:0003080!9.72e-14!40;UBERON:0002780!4.46e-13!39;UBERON:0001890!4.46e-13!39;UBERON:0006240!4.46e-13!39;UBERON:0004121!4.82e-13!102;UBERON:0000924!4.82e-13!102;UBERON:0006601!4.82e-13!102;UBERON:0000956!2.30e-11!21;UBERON:0001869!2.30e-11!21;UBERON:0000203!2.30e-11!21;UBERON:0002021!9.34e-10!10;UBERON:0000411!9.34e-10!10;UBERON:0001950!9.34e-10!10;UBERON:0002619!1.81e-09!17;UBERON:0007811!7.66e-09!86;UBERON:0000153!2.23e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.35e-30,54;UBERON:0002020,4.53e-27,34;UBERON:0001049,1.98e-26,52;UBERON:0005068,1.98e-26,52;UBERON:0006241,1.98e-26,52;UBERON:0007135,1.98e-26,52;UBERON:0001017,1.52e-24,73;UBERON:0001016,1.34e-23,75;UBERON:0000955,6.61e-22,47;UBERON:0006238,6.61e-22,47;UBERON:0002346,5.32e-21,64;UBERON:0003075,5.32e-21,64;UBERON:0007284,5.32e-21,64;UBERON:0002616,1.16e-20,46;UBERON:0003528,4.42e-20,29;UBERON:0002791,4.42e-20,29;UBERON:0001893,4.42e-20,29;UBERON:0002021,1.22e-17,10;UBERON:0000411,1.22e-17,10;UBERON:0001950,1.22e-17,10;UBERON:0003080,1.57e-17,40;UBERON:0004121,2.20e-17,95;UBERON:0000924,2.20e-17,95;UBERON:0006601,2.20e-17,95;UBERON:0010371,3.19e-17,73;UBERON:0002780,2.17e-16,39;UBERON:0001890,2.17e-16,39;UBERON:0006240,2.17e-16,39;UBERON:0003056,3.10e-14,49;UBERON:0000025,1.24e-13,114;UBERON:0000956,1.42e-13,21;UBERON:0001869,1.42e-13,21;UBERON:0000203,1.42e-13,21;UBERON:0002619,5.37e-13,17;UBERON:0004111,5.01e-12,122;UBERON:0010314,9.87e-12,92;UBERON:0003076,1.12e-09,12;UBERON:0003057,1.12e-09,12;UBERON:0001948,9.19e-09,5;UBERON:0002315,9.19e-09,5;UBERON:0002420,9.13e-08,8;UBERON:0007245,9.13e-08,8;UBERON:0010009,9.13e-08,8;UBERON:0010011,9.13e-08,8;UBERON:0000454,9.13e-08,8;UBERON:0011216,1.59e-07,194;UBERON:0002240,3.41e-07,6;UBERON:0005174,3.41e-07,6;UBERON:0001137,3.41e-07,6;UBERON:0000369,6.22e-07,5;UBERON:0002435,6.22e-07,5;UBERON:0000204,6.22e-07,5;UBERON:0010082,6.22e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,2.64495489636016,0,0,0,0,0,0,0,0,0.829516898467821,1.4850653216486,0.630974884054146,3.42781181284564,3.09215957332259,2.32732518508413,0.862609239164127,0.919218786610021,3.30347642998166,1.65993539510744,1.0752457327937,1.71452174049252,1.09785172322892,1.56274011167028,0.837548997004143,1.12552522006336,1.98637722109853,5.89257170947335,3.41692033917847,2.23679334990361,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,1.86391761218122,3.22058876712702,3.14170060220183,0,0,0,0,2.54644086988199,1.83000241127451,1.63350657746724,5.38855392596057,4.34716277461562,1.24672826735736,2.27137768294861,0,0,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.60281927134286,1.15662048557257,0.640568601424249,0.374806898238915,0,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,0.630869845692382,1.23485534855141,0,0,0.213288250535234,0.464473343720877,0.644337306610467,0.403367049246685,0.22237804384487,0.190225626112559,0,0.658795818896044,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0,0.199141273254367,0,0.342745537829186,1.1270773567308,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,1.14075483509418,1.52770577197669,1.17345124144251,3.68513766371995,1.6663054862021,0,1.7339865851681,2.21464689648775,2.39182152986231,0,0,0,0,0,0,0,1.60550589987792,1.28932855251423,0,0,0.315508219416257,0,0,0,0.222798674082394,0.283076530788832,0,0,0,3.21321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:330908 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BMT5 | |||
|association_with_transcript=146bp_to_ENSMUST00000133142,uc009oqs.1_5end | |||
|cluster_id=chr9:28210880..28210924,+ | |||
|description=CAGE_peak_3_at_Opcml_5end | |||
|id=chr9:28210880..28210924,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0000540!5.69e-08!33;CL:0000047!5.69e-08!33;CL:0000031!5.69e-08!33;CL:0000404!5.69e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.79e-15,23;CL:0000337,3.79e-15,23;CL:0000540,3.30e-09,33;CL:0000047,3.30e-09,33;CL:0000031,3.30e-09,33;CL:0000404,3.30e-09,33;CL:0000393,3.76e-07,39;CL:0000211,3.76e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.20e-19!34;UBERON:0001049!6.45e-19!52;UBERON:0005068!6.45e-19!52;UBERON:0006241!6.45e-19!52;UBERON:0007135!6.45e-19!52;UBERON:0000955!2.35e-17!50;UBERON:0006238!2.35e-17!50;UBERON:0002616!1.23e-16!49;UBERON:0002346!3.59e-16!71;UBERON:0003075!3.59e-16!71;UBERON:0007284!3.59e-16!71;UBERON:0000033!4.80e-16!63;UBERON:0000073!7.18e-16!75;UBERON:0001016!7.18e-16!75;UBERON:0001017!8.05e-16!73;UBERON:0005743!8.05e-16!73;UBERON:0002791!8.77e-16!29;UBERON:0003528!8.77e-16!29;UBERON:0001893!8.77e-16!29;UBERON:0003056!4.69e-14!49;UBERON:0003080!9.72e-14!40;UBERON:0002780!4.46e-13!39;UBERON:0001890!4.46e-13!39;UBERON:0006240!4.46e-13!39;UBERON:0004121!4.82e-13!102;UBERON:0000924!4.82e-13!102;UBERON:0006601!4.82e-13!102;UBERON:0000956!2.30e-11!21;UBERON:0001869!2.30e-11!21;UBERON:0000203!2.30e-11!21;UBERON:0002021!9.34e-10!10;UBERON:0000411!9.34e-10!10;UBERON:0001950!9.34e-10!10;UBERON:0002619!1.81e-09!17;UBERON:0007811!7.66e-09!86;UBERON:0000153!2.23e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.35e-30,54;UBERON:0002020,4.53e-27,34;UBERON:0001049,1.98e-26,52;UBERON:0005068,1.98e-26,52;UBERON:0006241,1.98e-26,52;UBERON:0007135,1.98e-26,52;UBERON:0001017,1.52e-24,73;UBERON:0001016,1.34e-23,75;UBERON:0000955,6.61e-22,47;UBERON:0006238,6.61e-22,47;UBERON:0002346,5.32e-21,64;UBERON:0003075,5.32e-21,64;UBERON:0007284,5.32e-21,64;UBERON:0002616,1.16e-20,46;UBERON:0003528,4.42e-20,29;UBERON:0002791,4.42e-20,29;UBERON:0001893,4.42e-20,29;UBERON:0002021,1.22e-17,10;UBERON:0000411,1.22e-17,10;UBERON:0001950,1.22e-17,10;UBERON:0003080,1.57e-17,40;UBERON:0004121,2.20e-17,95;UBERON:0000924,2.20e-17,95;UBERON:0006601,2.20e-17,95;UBERON:0010371,3.19e-17,73;UBERON:0002780,2.17e-16,39;UBERON:0001890,2.17e-16,39;UBERON:0006240,2.17e-16,39;UBERON:0003056,3.10e-14,49;UBERON:0000025,1.24e-13,114;UBERON:0000956,1.42e-13,21;UBERON:0001869,1.42e-13,21;UBERON:0000203,1.42e-13,21;UBERON:0002619,5.37e-13,17;UBERON:0004111,5.01e-12,122;UBERON:0010314,9.87e-12,92;UBERON:0003076,1.12e-09,12;UBERON:0003057,1.12e-09,12;UBERON:0001948,9.19e-09,5;UBERON:0002315,9.19e-09,5;UBERON:0002420,9.13e-08,8;UBERON:0007245,9.13e-08,8;UBERON:0010009,9.13e-08,8;UBERON:0010011,9.13e-08,8;UBERON:0000454,9.13e-08,8;UBERON:0011216,1.59e-07,194;UBERON:0002240,3.41e-07,6;UBERON:0005174,3.41e-07,6;UBERON:0001137,3.41e-07,6;UBERON:0000369,6.22e-07,5;UBERON:0002435,6.22e-07,5;UBERON:0000204,6.22e-07,5;UBERON:0010082,6.22e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,2.64495489636016,0,0,0,0,0,0,0,0,0.829516898467821,1.4850653216486,0.630974884054146,3.42781181284564,3.09215957332259,2.32732518508413,0.862609239164127,0.919218786610021,3.30347642998166,1.65993539510744,1.0752457327937,1.71452174049252,1.09785172322892,1.56274011167028,0.837548997004143,1.12552522006336,1.98637722109853,5.89257170947335,3.41692033917847,2.23679334990361,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,1.86391761218122,3.22058876712702,3.14170060220183,0,0,0,0,2.54644086988199,1.83000241127451,1.63350657746724,5.38855392596057,4.34716277461562,1.24672826735736,2.27137768294861,0,0,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.60281927134286,1.15662048557257,0.640568601424249,0.374806898238915,0,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,0.630869845692382,1.23485534855141,0,0,0.213288250535234,0.464473343720877,0.644337306610467,0.403367049246685,0.22237804384487,0.190225626112559,0,0.658795818896044,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0,0.199141273254367,0,0.342745537829186,1.1270773567308,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,1.14075483509418,1.52770577197669,1.17345124144251,3.68513766371995,1.6663054862021,0,1.7339865851681,2.21464689648775,2.39182152986231,0,0,0,0,0,0,0,1.60550589987792,1.28932855251423,0,0,0.315508219416257,0,0,0,0.222798674082394,0.283076530788832,0,0,0,3.21321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.927126510052548,0,0.412773735926445,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.648032044930808,0.209088296014469,0,0,0.495920734352016,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,13.5540442228096,10.1271552031579,11.4579102687879,12.2015759464018,8.22099023724771,3.7769694869485,9.45031500324528,5.40385443869065,3.17199686288943,6.73088405277366,0,0.399024873401031,0.341467211508268,0.972426868273176,0.419226325255965,0.919217542250071,1.11123363900808,0.824140228955577,0.64183841918363,0.758091635291392,0.760437899670719,1.32038438970253,0.655490552289177,0.704276676453562,0.631790158511746,1.90517476513229,1.15884325944855,0.964546102318525,0.412085900803307,1.61918812147837,1.71434626192708,0.887379030796687,0.953744759789284,1.16277133305863,0.564656282491984,0.169229215783353,0.73171189149109,0.789209134313529,1.49384525230448,1.68342681497322,0.949080144993393,0.689531376628944,0.818462086339379,1.23949472948773,0.771626443924566,0.999242311751784,0.467863216890817,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Opcml | |||
}} |
Revision as of 23:20, 4 August 2015
Short description: | p3@Opcml |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Opcml_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 146bp_to_ENSMUST00000133142, uc009oqs.1_5end |
EntrezGene: | 330908 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.79e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.79e-15 | 23 |
neuron | 3.30e-09 | 33 |
neuronal stem cell | 3.30e-09 | 33 |
neuroblast | 3.30e-09 | 33 |
electrically signaling cell | 3.30e-09 | 33 |
electrically responsive cell | 3.76e-07 | 39 |
electrically active cell | 3.76e-07 | 39 |