FFCP PHASE1:Mm9::chr17:36183506..36183515,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=131|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:36183506..36183515,-|id=chr17:36183506..36183515,-|ontology_enrichment_celltype=CL:0000239!1.04e-18!6;CL:0000677!1.04e-18!6;CL:0000212!1.04e-18!6;CL:0000584!1.04e-18!6;CL:0000075!6.01e-16!7;CL:0000066!4.76e-13!25;CL:0002563!2.93e-12!9;CL:0002251!2.93e-12!9;CL:0000473!3.22e-10!3;CL:0000627!3.22e-10!3;CL:0000682!3.22e-10!3;CL:0000063!2.24e-08!66;CL:0002076!4.36e-07!15;CL:0000223!7.75e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,2.87e-32,6;CL:0000677,2.87e-32,6;CL:0000584,2.87e-32,6;CL:0000075,1.24e-27,7;CL:0002563,1.92e-21,9;CL:0002251,1.92e-21,9;CL:0000682,4.90e-17,3;CL:0000066,1.25e-16,25;CL:0002076,9.52e-13,15;CL:0000223,1.80e-09,20;CL:0000473,1.29e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!9.30e-29!15;UBERON:0001242!5.73e-23!13;UBERON:0000060!5.73e-23!13;UBERON:0001262!5.73e-23!13;UBERON:0004786!5.73e-23!13;UBERON:0004923!4.44e-20!24;UBERON:0000485!4.80e-13!11;UBERON:0003350!2.93e-12!9;UBERON:0004808!2.93e-12!9;UBERON:0001277!2.93e-12!9;UBERON:0000331!9.55e-11!3;UBERON:0002116!9.55e-11!3;UBERON:0001204!9.55e-11!3;UBERON:0001168!9.55e-11!3;UBERON:0001962!1.24e-07!2;UBERON:0001961!1.24e-07!2;UBERON:0001744!1.24e-07!2;UBERON:0000160!8.24e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.54e-43,15;UBERON:0001242,1.65e-33,13;UBERON:0001262,1.65e-33,13;UBERON:0004786,1.65e-33,13;UBERON:0004923,9.06e-32,24;UBERON:0003350,1.92e-21,9;UBERON:0004808,1.92e-21,9;UBERON:0001277,1.92e-21,9;UBERON:0000331,5.55e-18,3;UBERON:0002116,5.55e-18,3;UBERON:0001204,5.55e-18,3;UBERON:0001168,5.55e-18,3;UBERON:0000485,1.70e-17,11;UBERON:0002108,1.24e-13,4;UBERON:0000160,1.78e-13,31;UBERON:0001962,2.02e-12,2;UBERON:0001961,2.02e-12,2;UBERON:0001744,2.02e-12,2;UBERON:0002465,1.42e-08,3;UBERON:0005409,1.63e-08,47;UBERON:0003199,4.10e-07,1|phase1_expression=0.160148847104794,1.74487703819681,2.27499619694768,7.56160528267075,5.00895729946347,1.17515490338323,1.40167584357315,0.129123323441576,0,0,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,4.95976510659561,6.65286915094793,4.59385571292016,3.4460959692726,1.72376986148711,22.8028103347649,10.0812051903972,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,5.93756174539112,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48282449604674,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:36183506..36183515,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:36183506..36183515,- | |||
|description=CAGE_peak_at_chr17:36183506..36183515,- | |||
|id=chr17:36183506..36183515,- | |||
|ontology_enrichment_celltype=CL:0000239!1.04e-18!6;CL:0000677!1.04e-18!6;CL:0000212!1.04e-18!6;CL:0000584!1.04e-18!6;CL:0000075!6.01e-16!7;CL:0000066!4.76e-13!25;CL:0002563!2.93e-12!9;CL:0002251!2.93e-12!9;CL:0000473!3.22e-10!3;CL:0000627!3.22e-10!3;CL:0000682!3.22e-10!3;CL:0000063!2.24e-08!66;CL:0002076!4.36e-07!15;CL:0000223!7.75e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.87e-32,6;CL:0000677,2.87e-32,6;CL:0000584,2.87e-32,6;CL:0000075,1.24e-27,7;CL:0002563,1.92e-21,9;CL:0002251,1.92e-21,9;CL:0000682,4.90e-17,3;CL:0000066,1.25e-16,25;CL:0002076,9.52e-13,15;CL:0000223,1.80e-09,20;CL:0000473,1.29e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.30e-29!15;UBERON:0001242!5.73e-23!13;UBERON:0000060!5.73e-23!13;UBERON:0001262!5.73e-23!13;UBERON:0004786!5.73e-23!13;UBERON:0004923!4.44e-20!24;UBERON:0000485!4.80e-13!11;UBERON:0003350!2.93e-12!9;UBERON:0004808!2.93e-12!9;UBERON:0001277!2.93e-12!9;UBERON:0000331!9.55e-11!3;UBERON:0002116!9.55e-11!3;UBERON:0001204!9.55e-11!3;UBERON:0001168!9.55e-11!3;UBERON:0001962!1.24e-07!2;UBERON:0001961!1.24e-07!2;UBERON:0001744!1.24e-07!2;UBERON:0000160!8.24e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.54e-43,15;UBERON:0001242,1.65e-33,13;UBERON:0001262,1.65e-33,13;UBERON:0004786,1.65e-33,13;UBERON:0004923,9.06e-32,24;UBERON:0003350,1.92e-21,9;UBERON:0004808,1.92e-21,9;UBERON:0001277,1.92e-21,9;UBERON:0000331,5.55e-18,3;UBERON:0002116,5.55e-18,3;UBERON:0001204,5.55e-18,3;UBERON:0001168,5.55e-18,3;UBERON:0000485,1.70e-17,11;UBERON:0002108,1.24e-13,4;UBERON:0000160,1.78e-13,31;UBERON:0001962,2.02e-12,2;UBERON:0001961,2.02e-12,2;UBERON:0001744,2.02e-12,2;UBERON:0002465,1.42e-08,3;UBERON:0005409,1.63e-08,47;UBERON:0003199,4.10e-07,1 | |||
|phase1_expression=0.160148847104794,1.74487703819681,2.27499619694768,7.56160528267075,5.00895729946347,1.17515490338323,1.40167584357315,0.129123323441576,0,0,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,4.95976510659561,6.65286915094793,4.59385571292016,3.4460959692726,1.72376986148711,22.8028103347649,10.0812051903972,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,5.93756174539112,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48282449604674,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:36183506..36183515,- | |||
}} |
Latest revision as of 20:38, 4 August 2015
Short description: | p@chr17:36183506..36183515, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:36183506..36183515, - |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.87e-32 | 6 |
gut absorptive cell | 2.87e-32 | 6 |
enterocyte | 2.87e-32 | 6 |
columnar/cuboidal epithelial cell | 1.24e-27 | 7 |
intestinal epithelial cell | 1.92e-21 | 9 |
epithelial cell of alimentary canal | 1.92e-21 | 9 |
M cell of gut | 4.90e-17 | 3 |
epithelial cell | 1.25e-16 | 25 |
endo-epithelial cell | 9.52e-13 | 15 |
endodermal cell | 1.80e-09 | 20 |
defensive cell | 1.29e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.54e-43 | 15 |
intestinal mucosa | 1.65e-33 | 13 |
wall of intestine | 1.65e-33 | 13 |
gastrointestinal system mucosa | 1.65e-33 | 13 |
organ component layer | 9.06e-32 | 24 |
epithelium of mucosa | 1.92e-21 | 9 |
gastrointestinal system epithelium | 1.92e-21 | 9 |
intestinal epithelium | 1.92e-21 | 9 |
ileal mucosa | 5.55e-18 | 3 |
ileum | 5.55e-18 | 3 |
mucosa of small intestine | 5.55e-18 | 3 |
wall of small intestine | 5.55e-18 | 3 |
simple columnar epithelium | 1.70e-17 | 11 |
small intestine | 1.24e-13 | 4 |
intestine | 1.78e-13 | 31 |
gut-associated lymphoid tissue | 2.02e-12 | 2 |
mucosa-associated lymphoid tissue | 2.02e-12 | 2 |
lymphoid tissue | 2.02e-12 | 2 |
lymphoid system | 1.42e-08 | 3 |
gastrointestinal system | 1.63e-08 | 47 |
egg chamber | 4.10e-07 | 1 |