FFCP PHASE1:Mm9::chr14:76244742..76244755,-: Difference between revisions
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{{FFCP|EntrezGene=100043189|HGNC=|MCL_coexpression_id=386|UniProt=|association_with_transcript=15bp_to_ENSMUST00000131222,NR_045294_5end|description=CAGE_peak_3_at_Gm4285_5end|id=chr14:76244742..76244755,-|ontology_enrichment_celltype=CL:0000066!1.50e-09!25;CL:0000223!1.89e-07!20|ontology_enrichment_celltype_v019_2=CL:0000223,8.58e-15,20;CL:0002563,1.19e-14,9;CL:0002251,1.19e-14,9;CL:0000066,1.90e-13,25;CL:0002250,5.12e-09,3;CL:0000182,5.54e-09,5;CL:0002076,2.48e-08,15;CL:0000239,8.16e-08,6;CL:0000677,8.16e-08,6;CL:0000584,8.16e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001242!4.47e-08!13;UBERON:0000060!4.47e-08!13;UBERON:0001262!4.47e-08!13;UBERON:0004786!4.47e-08!13;UBERON:0000485!1.73e-07!11;UBERON:0000344!9.37e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.16e-15,13;UBERON:0001262,1.16e-15,13;UBERON:0004786,1.16e-15,13;UBERON:0003350,1.19e-14,9;UBERON:0004808,1.19e-14,9;UBERON:0001277,1.19e-14,9;UBERON:0000344,2.46e-13,15;UBERON:0000485,8.89e-12,11;UBERON:0000490,1.57e-11,66;UBERON:0003929,3.16e-10,55;UBERON:0000160,3.85e-08,31;UBERON:0004923,1.11e-07,24;UBERON:0005911,2.24e-07,69|phase1_expression=0.640595388419176,4.18770489167233,2.27499619694768,5.74682001482977,7.51343594919521,0.671517087647559,0.467225281191051,1.54947988129892,1.40788722151667,1.40438715793196,0,0.239316476986009,0.171200729931206,0.437102012094987,0.999329285446988,0.404950534779652,0,0,0,0,0.425216450755349,0.496454756004426,0.261199789138935,0,0.22940928106717,0.57423196411502,0.86152399231815,1.29282739611533,1.14014051673824,0.252030129759931,0.886922042621219,1.27006134691926,0,0,4.33277429626912,2.1610503896604,4.08338712524738,1.67412652294763,3.906676722619,0.523523743973798,6.47054636834116,2.73218193983378,2.42755176515577,0.125896817975577,0.101376931219515,0.917733760808408,0,0,0.878744730937887,0.194429899074283,0.419959264876088,0,0.167782606057736,0.725362142011344,0.672187598284928,0.514518872071894,0,1.03134418455488,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0,0.103689612308478,0,0.210324961351382,0.856952953211411,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0.605809546665472,0.604572480854284,4.05810284182349,1.72084775396277,3.39985666853875,2.15881276655127,2.59910566979068,0.896053774194671,0.983110940922263,0,0.259786004602869,0.70667914902068,0.985903938436763,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.22836775943812,0,0,0.693941307064543,0,0,0.150722640552623,0.117588707135705,0.376999773989026,0.494389935468748,0.433798070759735,0,0,0.220841518460394,0.484875253135222,0,0,0,0.766371165625774,0.479260498023681,0.599902730993408,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0.203678727700633,0.248813941220186,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0.465067889500816,0,0.233530684734339,0.16455984991348,0,0.486412857275134,0.584799949701329,0.439100230582101,0.268412837520744,0,0,2.31293148088659,1.05780226665418,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,1.08069024937347,0.796565093017469,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.49095073923223,0.252946148497029,0.442830443938806,0.784993639206874,1.1105744752962,0.296452627087149,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.50925170356284,0,2.59416362840057,0.823684239564244,0,0.372140947668503,0,1.26289438973556,1.25578189465339,0.482443521363367,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0,0,0.54390568381871,0.983528546038072,0.551873492609465,0.160550589987792,0.35163505977661,0.491804836130026,0.504941854408746,0.315508219416257,0,0.215423397732799,1.19484398976276,0.445597348164788,1.41538265394416,0.809621403349789,0.584511715822624,0.395287777946524,0,0.425820255624806,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,1.05418608574999,2.06271086496374,0.340439605753788,0.36012218806262,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0.23467170806371,0.63549621259146,0.220528398054962,0.49465875882444,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0.565105371014073,0.136694227721025,0,0,0.839708713941948,0.829199842826543,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100043189 | |||
|HGNC= | |||
|MCL_coexpression_id=386 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENSMUST00000131222,NR_045294_5end | |||
|cluster_id=chr14:76244742..76244755,- | |||
|description=CAGE_peak_3_at_Gm4285_5end | |||
|id=chr14:76244742..76244755,- | |||
|ontology_enrichment_celltype=CL:0000066!1.50e-09!25;CL:0000223!1.89e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,8.58e-15,20;CL:0002563,1.19e-14,9;CL:0002251,1.19e-14,9;CL:0000066,1.90e-13,25;CL:0002250,5.12e-09,3;CL:0000182,5.54e-09,5;CL:0002076,2.48e-08,15;CL:0000239,8.16e-08,6;CL:0000677,8.16e-08,6;CL:0000584,8.16e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!4.47e-08!13;UBERON:0000060!4.47e-08!13;UBERON:0001262!4.47e-08!13;UBERON:0004786!4.47e-08!13;UBERON:0000485!1.73e-07!11;UBERON:0000344!9.37e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.16e-15,13;UBERON:0001262,1.16e-15,13;UBERON:0004786,1.16e-15,13;UBERON:0003350,1.19e-14,9;UBERON:0004808,1.19e-14,9;UBERON:0001277,1.19e-14,9;UBERON:0000344,2.46e-13,15;UBERON:0000485,8.89e-12,11;UBERON:0000490,1.57e-11,66;UBERON:0003929,3.16e-10,55;UBERON:0000160,3.85e-08,31;UBERON:0004923,1.11e-07,24;UBERON:0005911,2.24e-07,69 | |||
|phase1_expression=0.640595388419176,4.18770489167233,2.27499619694768,5.74682001482977,7.51343594919521,0.671517087647559,0.467225281191051,1.54947988129892,1.40788722151667,1.40438715793196,0,0.239316476986009,0.171200729931206,0.437102012094987,0.999329285446988,0.404950534779652,0,0,0,0,0.425216450755349,0.496454756004426,0.261199789138935,0,0.22940928106717,0.57423196411502,0.86152399231815,1.29282739611533,1.14014051673824,0.252030129759931,0.886922042621219,1.27006134691926,0,0,4.33277429626912,2.1610503896604,4.08338712524738,1.67412652294763,3.906676722619,0.523523743973798,6.47054636834116,2.73218193983378,2.42755176515577,0.125896817975577,0.101376931219515,0.917733760808408,0,0,0.878744730937887,0.194429899074283,0.419959264876088,0,0.167782606057736,0.725362142011344,0.672187598284928,0.514518872071894,0,1.03134418455488,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0,0.103689612308478,0,0.210324961351382,0.856952953211411,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0.605809546665472,0.604572480854284,4.05810284182349,1.72084775396277,3.39985666853875,2.15881276655127,2.59910566979068,0.896053774194671,0.983110940922263,0,0.259786004602869,0.70667914902068,0.985903938436763,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.22836775943812,0,0,0.693941307064543,0,0,0.150722640552623,0.117588707135705,0.376999773989026,0.494389935468748,0.433798070759735,0,0,0.220841518460394,0.484875253135222,0,0,0,0.766371165625774,0.479260498023681,0.599902730993408,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0.203678727700633,0.248813941220186,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0.465067889500816,0,0.233530684734339,0.16455984991348,0,0.486412857275134,0.584799949701329,0.439100230582101,0.268412837520744,0,0,2.31293148088659,1.05780226665418,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,1.08069024937347,0.796565093017469,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.49095073923223,0.252946148497029,0.442830443938806,0.784993639206874,1.1105744752962,0.296452627087149,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.50925170356284,0,2.59416362840057,0.823684239564244,0,0.372140947668503,0,1.26289438973556,1.25578189465339,0.482443521363367,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0,0,0.54390568381871,0.983528546038072,0.551873492609465,0.160550589987792,0.35163505977661,0.491804836130026,0.504941854408746,0.315508219416257,0,0.215423397732799,1.19484398976276,0.445597348164788,1.41538265394416,0.809621403349789,0.584511715822624,0.395287777946524,0,0.425820255624806,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,1.05418608574999,2.06271086496374,0.340439605753788,0.36012218806262,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0.23467170806371,0.63549621259146,0.220528398054962,0.49465875882444,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0.565105371014073,0.136694227721025,0,0,0.839708713941948,0.829199842826543,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0.179427713218951,0.167884616364078,0.386379188064381,1.31377732815827,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0.824140228955577,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.593175090620871,0.0985044823755635,0,0.154936841185966,0,0,0,0.644613162144895,0.765153328275374,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Gm4285 | |||
}} |
Revision as of 20:02, 4 August 2015
Short description: | p3@Gm4285 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm4285_5end |
Coexpression cluster: | MCL_coexpression_mm9:386 |
Association with transcript: | 15bp_to_ENSMUST00000131222, NR_045294_5end |
EntrezGene: | 100043189 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 8.58e-15 | 20 |
intestinal epithelial cell | 1.19e-14 | 9 |
epithelial cell of alimentary canal | 1.19e-14 | 9 |
epithelial cell | 1.90e-13 | 25 |
intestinal crypt stem cell | 5.12e-09 | 3 |
hepatocyte | 5.54e-09 | 5 |
endo-epithelial cell | 2.48e-08 | 15 |
brush border epithelial cell | 8.16e-08 | 6 |
gut absorptive cell | 8.16e-08 | 6 |
enterocyte | 8.16e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.16e-15 | 13 |
wall of intestine | 1.16e-15 | 13 |
gastrointestinal system mucosa | 1.16e-15 | 13 |
epithelium of mucosa | 1.19e-14 | 9 |
gastrointestinal system epithelium | 1.19e-14 | 9 |
intestinal epithelium | 1.19e-14 | 9 |
mucosa | 2.46e-13 | 15 |
simple columnar epithelium | 8.89e-12 | 11 |
unilaminar epithelium | 1.57e-11 | 66 |
gut epithelium | 3.16e-10 | 55 |
intestine | 3.85e-08 | 31 |
organ component layer | 1.11e-07 | 24 |
endo-epithelium | 2.24e-07 | 69 |