FFCP PHASE1:Mm9::chr10:79957600..79957618,+: Difference between revisions
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{{FFCP|EntrezGene=246086|HGNC=|MCL_coexpression_id=224|UniProt=Q8K557|association_with_transcript=-32bp_to_ENSMUST00000051773,NM_139226,uc007gdn.1_5end|description=CAGE_peak_1_at_Onecut3_5end|id=chr10:79957600..79957618,+|ontology_enrichment_celltype=CL:0000117!8.97e-08!23;CL:0000337!8.97e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.69e-13,23;CL:0000337,4.69e-13,23;CL:0000120,3.89e-10,3;CL:0002613,6.21e-10,3;CL:0000540,2.00e-08,33;CL:0000047,2.00e-08,33;CL:0000031,2.00e-08,33;CL:0000404,2.00e-08,33;CL:0002612,4.96e-08,3;CL:0000393,8.50e-07,39;CL:0000211,8.50e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!8.55e-09!9;UBERON:0000019!8.55e-09!9;UBERON:0000047!8.55e-09!9;UBERON:0004088!8.55e-09!9;UBERON:0002104!8.55e-09!9;UBERON:0001456!8.55e-09!9;UBERON:0003072!8.55e-09!9;UBERON:0003071!8.55e-09!9;UBERON:0004128!8.55e-09!9|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.41e-14,9;UBERON:0000019,1.41e-14,9;UBERON:0000047,1.41e-14,9;UBERON:0010312,1.41e-14,9;UBERON:0004088,1.41e-14,9;UBERON:0002104,1.41e-14,9;UBERON:0001456,1.41e-14,9;UBERON:0003072,1.41e-14,9;UBERON:0004128,1.41e-14,9;UBERON:0003071,1.41e-14,9;UBERON:0001444,9.54e-12,11;UBERON:0000020,1.10e-10,12;UBERON:0001032,1.10e-10,12;UBERON:0004456,1.10e-10,12;UBERON:0000033,8.72e-10,13;UBERON:0005085,8.72e-10,13;UBERON:0001948,2.51e-08,5;UBERON:0002315,2.51e-08,5;UBERON:0002257,4.96e-08,3;UBERON:0002346,1.21e-07,64;UBERON:0003075,1.21e-07,64;UBERON:0007284,1.21e-07,64;UBERON:0004121,1.41e-07,95;UBERON:0000924,1.41e-07,95;UBERON:0006601,1.41e-07,95;UBERON:0003076,3.89e-07,12;UBERON:0003057,3.89e-07,12;UBERON:0002240,5.94e-07,6;UBERON:0005174,5.94e-07,6;UBERON:0001137,5.94e-07,6|phase1_expression=0,0.348975407639361,0,0,0,1.6787927191189,1.40167584357315,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,0,0,0.261199789138935,0.319984845586813,0,0,0.86152399231815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87875966922632,6.34789175126439,10.1413024560989,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.54607978666129,0,0,0,2.20231761998777,0.510749352340751,0.307213066512487,7.12185953743047,6.12967212136145,3.12548022334056,0.279182999001381,0.56276261003168,0.15279824777681,1.17851434189467,1.28134512719193,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0.239630249011841,0,0.254140454146129,0.599162557619291,0,0.125654352112864,0,0,0.62336413367868,0.648965052271031,0,0,0,0.841767423545896,0.780722657776222,3.21862946206862,2.52086981727489,2.26057226753573,2.17716797284249,1.40925092313335,1.40552586839593,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.469052119962192,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,1.32167513193519,0,0,0.232236671860439,0.38660238396628,0.605050573870028,0.444756087689741,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,2.66952169145751,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.05490517932983,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,1.21390318077491,0,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.720244376125241,0.388076051348264,0.214337035031592,0,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0,0,0.582961673259701,0.18542530201051,0,0,0,0,0,0,0,0.419854356970974,0.414599921413271,0,2.53068794864908,0.406638934253697,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.909188012978695,1.04702376793612,0.129614973291793,0,0,0.299033092087958,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1136204275253,3.99024873401031,1.70733605754134,0.243106717068294,0.419226325255965,0.183843508450014,1.33348036680969,0.412070114477788,0,0.505394423527595,1.01391719956096,0.377252682772152,0.655490552289177,0.512201219238954,0.459483751644906,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0,0.238436189947321,0.290692833264657,0.188218760830661,0,0.73171189149109,0.526139422875686,0.407412341537585,0,0.118635018124174,0.29551344712669,0.818462086339379,0.309873682371932,0.385813221962283,1.24905288968973,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p1@Onecut3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:246086 | |||
|HGNC= | |||
|MCL_coexpression_id=224 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K557 | |||
|association_with_transcript=-32bp_to_ENSMUST00000051773,NM_139226,uc007gdn.1_5end | |||
|cluster_id=chr10:79957600..79957618,+ | |||
|description=CAGE_peak_1_at_Onecut3_5end | |||
|id=chr10:79957600..79957618,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.97e-08!23;CL:0000337!8.97e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.69e-13,23;CL:0000337,4.69e-13,23;CL:0000120,3.89e-10,3;CL:0002613,6.21e-10,3;CL:0000540,2.00e-08,33;CL:0000047,2.00e-08,33;CL:0000031,2.00e-08,33;CL:0000404,2.00e-08,33;CL:0002612,4.96e-08,3;CL:0000393,8.50e-07,39;CL:0000211,8.50e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!8.55e-09!9;UBERON:0000019!8.55e-09!9;UBERON:0000047!8.55e-09!9;UBERON:0004088!8.55e-09!9;UBERON:0002104!8.55e-09!9;UBERON:0001456!8.55e-09!9;UBERON:0003072!8.55e-09!9;UBERON:0003071!8.55e-09!9;UBERON:0004128!8.55e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.41e-14,9;UBERON:0000019,1.41e-14,9;UBERON:0000047,1.41e-14,9;UBERON:0010312,1.41e-14,9;UBERON:0004088,1.41e-14,9;UBERON:0002104,1.41e-14,9;UBERON:0001456,1.41e-14,9;UBERON:0003072,1.41e-14,9;UBERON:0004128,1.41e-14,9;UBERON:0003071,1.41e-14,9;UBERON:0001444,9.54e-12,11;UBERON:0000020,1.10e-10,12;UBERON:0001032,1.10e-10,12;UBERON:0004456,1.10e-10,12;UBERON:0000033,8.72e-10,13;UBERON:0005085,8.72e-10,13;UBERON:0001948,2.51e-08,5;UBERON:0002315,2.51e-08,5;UBERON:0002257,4.96e-08,3;UBERON:0002346,1.21e-07,64;UBERON:0003075,1.21e-07,64;UBERON:0007284,1.21e-07,64;UBERON:0004121,1.41e-07,95;UBERON:0000924,1.41e-07,95;UBERON:0006601,1.41e-07,95;UBERON:0003076,3.89e-07,12;UBERON:0003057,3.89e-07,12;UBERON:0002240,5.94e-07,6;UBERON:0005174,5.94e-07,6;UBERON:0001137,5.94e-07,6 | |||
|phase1_expression=0,0.348975407639361,0,0,0,1.6787927191189,1.40167584357315,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,0,0,0.261199789138935,0.319984845586813,0,0,0.86152399231815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87875966922632,6.34789175126439,10.1413024560989,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.54607978666129,0,0,0,2.20231761998777,0.510749352340751,0.307213066512487,7.12185953743047,6.12967212136145,3.12548022334056,0.279182999001381,0.56276261003168,0.15279824777681,1.17851434189467,1.28134512719193,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0.239630249011841,0,0.254140454146129,0.599162557619291,0,0.125654352112864,0,0,0.62336413367868,0.648965052271031,0,0,0,0.841767423545896,0.780722657776222,3.21862946206862,2.52086981727489,2.26057226753573,2.17716797284249,1.40925092313335,1.40552586839593,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.469052119962192,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,1.32167513193519,0,0,0.232236671860439,0.38660238396628,0.605050573870028,0.444756087689741,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,2.66952169145751,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.05490517932983,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,1.21390318077491,0,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.720244376125241,0.388076051348264,0.214337035031592,0,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0,0,0.582961673259701,0.18542530201051,0,0,0,0,0,0,0,0.419854356970974,0.414599921413271,0,2.53068794864908,0.406638934253697,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.909188012978695,1.04702376793612,0.129614973291793,0,0,0.299033092087958,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1136204275253,3.99024873401031,1.70733605754134,0.243106717068294,0.419226325255965,0.183843508450014,1.33348036680969,0.412070114477788,0,0.505394423527595,1.01391719956096,0.377252682772152,0.655490552289177,0.512201219238954,0.459483751644906,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0,0.238436189947321,0.290692833264657,0.188218760830661,0,0.73171189149109,0.526139422875686,0.407412341537585,0,0.118635018124174,0.29551344712669,0.818462086339379,0.309873682371932,0.385813221962283,1.24905288968973,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p1@Onecut3 | |||
}} |
Revision as of 19:59, 4 August 2015
Short description: | p1@Onecut3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Onecut3_5end |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | -32bp_to_ENSMUST00000051773, NM_139226, uc007gdn.1_5end |
EntrezGene: | 246086 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.69e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.69e-13 | 23 |
granule cell | 3.89e-10 | 3 |
striatum neuron | 6.21e-10 | 3 |
neuron | 2.00e-08 | 33 |
neuronal stem cell | 2.00e-08 | 33 |
neuroblast | 2.00e-08 | 33 |
electrically signaling cell | 2.00e-08 | 33 |
neuron of the ventral spinal cord | 4.96e-08 | 3 |
electrically responsive cell | 8.50e-07 | 39 |
electrically active cell | 8.50e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
eye | 1.41e-14 | 9 |
camera-type eye | 1.41e-14 | 9 |
simple eye | 1.41e-14 | 9 |
immature eye | 1.41e-14 | 9 |
ocular region | 1.41e-14 | 9 |
visual system | 1.41e-14 | 9 |
face | 1.41e-14 | 9 |
optic cup | 1.41e-14 | 9 |
optic vesicle | 1.41e-14 | 9 |
eye primordium | 1.41e-14 | 9 |
subdivision of head | 9.54e-12 | 11 |
sense organ | 1.10e-10 | 12 |
sensory system | 1.10e-10 | 12 |
entire sense organ system | 1.10e-10 | 12 |
head | 8.72e-10 | 13 |
ectodermal placode | 8.72e-10 | 13 |
regional part of spinal cord | 2.51e-08 | 5 |
gray matter of spinal cord | 2.51e-08 | 5 |
ventral horn of spinal cord | 4.96e-08 | 3 |
neurectoderm | 1.21e-07 | 64 |
neural plate | 1.21e-07 | 64 |
presumptive neural plate | 1.21e-07 | 64 |
ectoderm-derived structure | 1.41e-07 | 95 |
ectoderm | 1.41e-07 | 95 |
presumptive ectoderm | 1.41e-07 | 95 |
posterior neural tube | 3.89e-07 | 12 |
chordal neural plate | 3.89e-07 | 12 |
spinal cord | 5.94e-07 | 6 |
dorsal region element | 5.94e-07 | 6 |
dorsum | 5.94e-07 | 6 |