FFCP PHASE1:Mm9::chr17:35840916..35840939,-: Difference between revisions
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{{FFCP|EntrezGene=12305|HGNC=|MCL_coexpression_id=573|UniProt=D6RII6|association_with_transcript=0bp_to_ENSMUST00000148065_5end|description=CAGE_peak_9_at_Ddr1_5end|id=chr17:35840916..35840939,-|ontology_enrichment_celltype=CL:0000221!5.85e-15!44;CL:0000133!5.85e-15!44;CL:0002319!8.50e-15!43;CL:0000540!4.79e-12!33;CL:0000047!4.79e-12!33;CL:0000031!4.79e-12!33;CL:0000404!4.79e-12!33;CL:0000055!2.88e-10!50;CL:0000117!2.59e-08!23;CL:0000337!2.59e-08!23;CL:0000393!3.84e-08!39;CL:0000211!3.84e-08!39|ontology_enrichment_celltype_v019_2=CL:0002319,1.81e-20,43;CL:0000221,8.18e-20,44;CL:0000133,8.18e-20,44;CL:0000540,3.29e-14,33;CL:0000047,3.29e-14,33;CL:0000031,3.29e-14,33;CL:0000404,3.29e-14,33;CL:0000117,1.71e-11,23;CL:0000337,1.71e-11,23;CL:0000393,4.03e-11,39;CL:0000211,4.03e-11,39;CL:0002453,1.55e-09,8;CL:0002321,1.72e-09,70;CL:0002609,6.00e-09,6;CL:0000333,2.50e-07,10;CL:0000095,2.50e-07,10;CL:0000243,2.50e-07,10;CL:0000123,2.50e-07,10;CL:0000125,2.50e-07,10;CL:0000030,2.50e-07,10;CL:0000339,2.50e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.46e-20!73;UBERON:0005743!1.46e-20!73;UBERON:0004121!9.52e-20!102;UBERON:0000924!9.52e-20!102;UBERON:0006601!9.52e-20!102;UBERON:0000073!1.07e-19!75;UBERON:0001016!1.07e-19!75;UBERON:0002346!5.44e-17!71;UBERON:0003075!5.44e-17!71;UBERON:0007284!5.44e-17!71;UBERON:0003056!8.38e-15!49;UBERON:0000033!6.18e-14!63;UBERON:0001049!2.88e-12!52;UBERON:0005068!2.88e-12!52;UBERON:0006241!2.88e-12!52;UBERON:0007135!2.88e-12!52;UBERON:0000955!5.50e-10!50;UBERON:0006238!5.50e-10!50;UBERON:0003080!9.28e-10!40;UBERON:0002616!1.43e-09!49;UBERON:0002780!1.49e-09!39;UBERON:0001890!1.49e-09!39;UBERON:0006240!1.49e-09!39;UBERON:0000153!8.02e-08!94;UBERON:0000468!8.60e-08!333;UBERON:0002020!7.09e-07!34;UBERON:0000970!8.26e-07!9;UBERON:0000019!8.26e-07!9;UBERON:0000047!8.26e-07!9;UBERON:0004088!8.26e-07!9;UBERON:0002104!8.26e-07!9;UBERON:0001456!8.26e-07!9;UBERON:0003072!8.26e-07!9;UBERON:0003071!8.26e-07!9;UBERON:0004128!8.26e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.86e-27,95;UBERON:0000924,7.86e-27,95;UBERON:0006601,7.86e-27,95;UBERON:0001017,4.71e-25,73;UBERON:0001016,4.54e-24,75;UBERON:0002346,7.97e-22,64;UBERON:0003075,7.97e-22,64;UBERON:0007284,7.97e-22,64;UBERON:0003056,2.25e-19,49;UBERON:0010371,7.74e-18,73;UBERON:0001049,1.08e-14,52;UBERON:0005068,1.08e-14,52;UBERON:0006241,1.08e-14,52;UBERON:0007135,1.08e-14,52;UBERON:0000955,4.24e-13,47;UBERON:0006238,4.24e-13,47;UBERON:0002780,8.62e-13,39;UBERON:0001890,8.62e-13,39;UBERON:0006240,8.62e-13,39;UBERON:0000073,1.00e-12,54;UBERON:0002616,2.35e-12,46;UBERON:0003080,2.57e-12,40;UBERON:0010314,4.75e-12,92;UBERON:0000970,4.45e-09,9;UBERON:0000019,4.45e-09,9;UBERON:0000047,4.45e-09,9;UBERON:0010312,4.45e-09,9;UBERON:0004088,4.45e-09,9;UBERON:0002104,4.45e-09,9;UBERON:0001456,4.45e-09,9;UBERON:0003072,4.45e-09,9;UBERON:0004128,4.45e-09,9;UBERON:0003071,4.45e-09,9;UBERON:0002020,1.54e-08,34;UBERON:0000007,5.82e-08,8;UBERON:0003296,5.82e-08,8;UBERON:0010133,5.82e-08,8;UBERON:0001954,7.49e-08,7;UBERON:0003022,7.49e-08,7;UBERON:0002421,7.49e-08,7;UBERON:0000349,7.49e-08,7;UBERON:0002600,7.49e-08,7;UBERON:0001894,1.01e-07,10;UBERON:0006222,1.01e-07,10;UBERON:0001444,3.90e-07,11;UBERON:0003528,4.01e-07,29;UBERON:0002791,4.01e-07,29;UBERON:0001893,4.01e-07,29|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.06693078607652,7.0299578475031,6.80504646759992,1.25987779462826,8.62515386189829,0,0,0,0,0,0,6.87875966922632,5.81890077199236,4.43681982454325,0,0,0,0,0,7.19040265244171,15.7529505181837,3.00699875694585,3.10513658162888,3.57552434297349,0.571301968807607,1.98781686856452,3.06226998037385,5.75072826109418,4.5960939330501,0,0.127687338085188,0.307213066512487,4.3522474950964,4.20843160571084,5.73004707612436,0,0.56276261003168,0.45839474333043,0.294628585473668,1.28134512719193,2.05039390407831,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0,0,0.647067399789637,0,0,0,0.585561594023094,0,0,0,0,0,0.599162557619291,0.457500602818626,2.01046963380583,0.173824320192276,0,0.62336413367868,1.1356888414743,0.611036183101898,0,0,0.420883711772948,5.59517904739626,10.8053989083732,8.64298223065676,9.34369870581433,15.1721393107461,14.476850392188,17.3348190435498,0.776110112217047,0.431135985865684,1.70195472151037,0.703804496655795,2.19195732427575,0.556094498451196,1.0447564995665,0.205782136407943,0.995171334092466,0,0,0,0.414251545071004,0.703578179943289,0,0,0.590292695242212,0.462801338662135,0,0,0,0.16455984991348,0,0,0,0,0,0,2.57261530948211,0,0,0.426576501070468,0.232236671860439,0.515469845288373,0.201683524623343,1.11189021922435,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.913988100877831,1.1270773567308,0.407302655690628,0.969762435838129,0.841629838683823,0.316182685621286,0.738050739898011,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0.963303539926752,1.28932855251423,0.163934945376675,0,0.631016438832513,0.780877488593277,2.58508077279359,1.19484398976276,1.55959071857676,1.41538265394416,1.61924280669958,1.75353514746787,0.790575555893047,1.28528526568723,0.141940085208269,1.24645922567079,0.325773918707152,0.164970122972535,0,0.728341908464944,0,0,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,5.76195500900193,4.13947788104814,2.57204442037911,1.06404140185364,2.49716344642899,1.64549020602121,3.95804433848979,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,0,1.29797711407357,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,1.26534397432454,0.203319467126849,0.324016022465404,0.418176592028937,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.165458490457098,0.777804753376191,0.387479470433193,0.168956125490778,0.58678619322877,0.39061315453185,0.104859344425711,0,0,0,0,0.205421914329655,0,0.358053391334963,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0,0,1.764384908931,7.98049746802062,3.75613932659095,2.43106717068294,0.628839487883947,0.183843508450014,0.666740183404846,0.824140228955577,0.320919209591815,1.26348605881899,0.50695859978048,0.188626341386076,0.655490552289177,0.960377286073039,0.631790158511746,0.476293691283074,0.463537303779422,0.578727661391115,1.23625770240992,0.294397840268795,1.02860775715625,0.532427418478012,0.715308569841963,0.872078499793971,0.941093804153306,0.592302255241736,0.548783918618318,0.526139422875686,1.08643291076689,0,0.237270036248348,0.689531376628944,0.818462086339379,0.619747364743864,0.385813221962283,2.24829520144151,1.63752125911786,0.859484216193193,0.956441660344217,0.220591419119515,0.231867835620421|short_description=p9@Ddr1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12305 | |||
|HGNC= | |||
|MCL_coexpression_id=573 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D6RII6 | |||
|association_with_transcript=0bp_to_ENSMUST00000148065_5end | |||
|cluster_id=chr17:35840916..35840939,- | |||
|description=CAGE_peak_9_at_Ddr1_5end | |||
|id=chr17:35840916..35840939,- | |||
|ontology_enrichment_celltype=CL:0000221!5.85e-15!44;CL:0000133!5.85e-15!44;CL:0002319!8.50e-15!43;CL:0000540!4.79e-12!33;CL:0000047!4.79e-12!33;CL:0000031!4.79e-12!33;CL:0000404!4.79e-12!33;CL:0000055!2.88e-10!50;CL:0000117!2.59e-08!23;CL:0000337!2.59e-08!23;CL:0000393!3.84e-08!39;CL:0000211!3.84e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.81e-20,43;CL:0000221,8.18e-20,44;CL:0000133,8.18e-20,44;CL:0000540,3.29e-14,33;CL:0000047,3.29e-14,33;CL:0000031,3.29e-14,33;CL:0000404,3.29e-14,33;CL:0000117,1.71e-11,23;CL:0000337,1.71e-11,23;CL:0000393,4.03e-11,39;CL:0000211,4.03e-11,39;CL:0002453,1.55e-09,8;CL:0002321,1.72e-09,70;CL:0002609,6.00e-09,6;CL:0000333,2.50e-07,10;CL:0000095,2.50e-07,10;CL:0000243,2.50e-07,10;CL:0000123,2.50e-07,10;CL:0000125,2.50e-07,10;CL:0000030,2.50e-07,10;CL:0000339,2.50e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.46e-20!73;UBERON:0005743!1.46e-20!73;UBERON:0004121!9.52e-20!102;UBERON:0000924!9.52e-20!102;UBERON:0006601!9.52e-20!102;UBERON:0000073!1.07e-19!75;UBERON:0001016!1.07e-19!75;UBERON:0002346!5.44e-17!71;UBERON:0003075!5.44e-17!71;UBERON:0007284!5.44e-17!71;UBERON:0003056!8.38e-15!49;UBERON:0000033!6.18e-14!63;UBERON:0001049!2.88e-12!52;UBERON:0005068!2.88e-12!52;UBERON:0006241!2.88e-12!52;UBERON:0007135!2.88e-12!52;UBERON:0000955!5.50e-10!50;UBERON:0006238!5.50e-10!50;UBERON:0003080!9.28e-10!40;UBERON:0002616!1.43e-09!49;UBERON:0002780!1.49e-09!39;UBERON:0001890!1.49e-09!39;UBERON:0006240!1.49e-09!39;UBERON:0000153!8.02e-08!94;UBERON:0000468!8.60e-08!333;UBERON:0002020!7.09e-07!34;UBERON:0000970!8.26e-07!9;UBERON:0000019!8.26e-07!9;UBERON:0000047!8.26e-07!9;UBERON:0004088!8.26e-07!9;UBERON:0002104!8.26e-07!9;UBERON:0001456!8.26e-07!9;UBERON:0003072!8.26e-07!9;UBERON:0003071!8.26e-07!9;UBERON:0004128!8.26e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.86e-27,95;UBERON:0000924,7.86e-27,95;UBERON:0006601,7.86e-27,95;UBERON:0001017,4.71e-25,73;UBERON:0001016,4.54e-24,75;UBERON:0002346,7.97e-22,64;UBERON:0003075,7.97e-22,64;UBERON:0007284,7.97e-22,64;UBERON:0003056,2.25e-19,49;UBERON:0010371,7.74e-18,73;UBERON:0001049,1.08e-14,52;UBERON:0005068,1.08e-14,52;UBERON:0006241,1.08e-14,52;UBERON:0007135,1.08e-14,52;UBERON:0000955,4.24e-13,47;UBERON:0006238,4.24e-13,47;UBERON:0002780,8.62e-13,39;UBERON:0001890,8.62e-13,39;UBERON:0006240,8.62e-13,39;UBERON:0000073,1.00e-12,54;UBERON:0002616,2.35e-12,46;UBERON:0003080,2.57e-12,40;UBERON:0010314,4.75e-12,92;UBERON:0000970,4.45e-09,9;UBERON:0000019,4.45e-09,9;UBERON:0000047,4.45e-09,9;UBERON:0010312,4.45e-09,9;UBERON:0004088,4.45e-09,9;UBERON:0002104,4.45e-09,9;UBERON:0001456,4.45e-09,9;UBERON:0003072,4.45e-09,9;UBERON:0004128,4.45e-09,9;UBERON:0003071,4.45e-09,9;UBERON:0002020,1.54e-08,34;UBERON:0000007,5.82e-08,8;UBERON:0003296,5.82e-08,8;UBERON:0010133,5.82e-08,8;UBERON:0001954,7.49e-08,7;UBERON:0003022,7.49e-08,7;UBERON:0002421,7.49e-08,7;UBERON:0000349,7.49e-08,7;UBERON:0002600,7.49e-08,7;UBERON:0001894,1.01e-07,10;UBERON:0006222,1.01e-07,10;UBERON:0001444,3.90e-07,11;UBERON:0003528,4.01e-07,29;UBERON:0002791,4.01e-07,29;UBERON:0001893,4.01e-07,29 | |||
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|short_description=p9@Ddr1 | |||
}} |
Revision as of 19:57, 4 August 2015
Short description: | p9@Ddr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Ddr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:573 |
Association with transcript: | 0bp_to_ENSMUST00000148065_5end |
EntrezGene: | 12305 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.81e-20 | 43 |
ectodermal cell | 8.18e-20 | 44 |
neurectodermal cell | 8.18e-20 | 44 |
neuron | 3.29e-14 | 33 |
neuronal stem cell | 3.29e-14 | 33 |
neuroblast | 3.29e-14 | 33 |
electrically signaling cell | 3.29e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.71e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.71e-11 | 23 |
electrically responsive cell | 4.03e-11 | 39 |
electrically active cell | 4.03e-11 | 39 |
oligodendrocyte precursor cell | 1.55e-09 | 8 |
embryonic cell | 1.72e-09 | 70 |
neuron of cerebral cortex | 6.00e-09 | 6 |
migratory neural crest cell | 2.50e-07 | 10 |
neuron associated cell | 2.50e-07 | 10 |
glial cell (sensu Vertebrata) | 2.50e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.50e-07 | 10 |
glial cell | 2.50e-07 | 10 |
glioblast | 2.50e-07 | 10 |
glioblast (sensu Vertebrata) | 2.50e-07 | 10 |