FFCP PHASE1:Mm9::chr12:114664902..114664912,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=320|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114664902..114664912,-|id=chr12:114664902..114664912,-|ontology_enrichment_celltype=CL:0000988!2.56e-10!32;CL:0002032!2.56e-10!32;CL:0000037!2.56e-10!32;CL:0000566!2.56e-10!32;CL:0000837!2.56e-10!32|ontology_enrichment_celltype_v019_2=CL:0000988,3.48e-08,32;CL:0002032,3.48e-08,32;CL:0000037,3.48e-08,32;CL:0000837,3.48e-08,32;CL:0000945,2.75e-07,1;CL:0000236,2.75e-07,1;CL:0000826,2.75e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.55e-21!48;UBERON:0002390!3.62e-18!45;UBERON:0003061!3.62e-18!45;UBERON:0004177!7.90e-17!29;UBERON:0002405!3.50e-16!70;UBERON:0002370!4.80e-11!23;UBERON:0000974!4.80e-11!23;UBERON:0004807!4.80e-11!23;UBERON:0005058!4.80e-11!23;UBERON:0003351!4.80e-11!23;UBERON:0009113!4.80e-11!23;UBERON:0003295!4.80e-11!23;UBERON:0009722!4.80e-11!23;UBERON:0005562!4.80e-11!23;UBERON:0007690!4.80e-11!23;UBERON:0005057!8.37e-11!51;UBERON:0006562!2.09e-10!24;UBERON:0003408!2.09e-10!24;UBERON:0001557!2.09e-10!24;UBERON:0001042!2.09e-10!24;UBERON:0008814!2.09e-10!24;UBERON:0009145!2.09e-10!24;UBERON:0003081!6.24e-09!88;UBERON:0000072!8.69e-09!27;UBERON:0000065!1.94e-08!41;UBERON:0001004!4.11e-08!42;UBERON:0002106!1.03e-07!6;UBERON:0004457!1.03e-07!6;UBERON:0000042!1.03e-07!6;UBERON:0004854!1.03e-07!6;UBERON:0009034!1.03e-07!6;UBERON:0002095!1.03e-07!6;UBERON:0004782!1.03e-07!6;UBERON:0003281!1.03e-07!6;UBERON:0009664!1.03e-07!6;UBERON:0002296!1.03e-07!6;UBERON:0005602!1.03e-07!6;UBERON:0001179!1.03e-07!6;UBERON:0006293!1.03e-07!6;UBERON:0000063!8.86e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.53e-14,23;UBERON:0000974,4.53e-14,23;UBERON:0004807,4.53e-14,23;UBERON:0005058,4.53e-14,23;UBERON:0003351,4.53e-14,23;UBERON:0009113,4.53e-14,23;UBERON:0003295,4.53e-14,23;UBERON:0009722,4.53e-14,23;UBERON:0005562,4.53e-14,23;UBERON:0007690,4.53e-14,23;UBERON:0006562,1.89e-13,24;UBERON:0003408,1.89e-13,24;UBERON:0001557,1.89e-13,24;UBERON:0001042,1.89e-13,24;UBERON:0008814,1.89e-13,24;UBERON:0009145,1.89e-13,24;UBERON:0002193,2.14e-12,48;UBERON:0002405,2.14e-12,48;UBERON:0000072,7.26e-12,27;UBERON:0004177,5.45e-11,29;UBERON:0005057,5.45e-11,29;UBERON:0002390,7.45e-11,45;UBERON:0003061,7.45e-11,45;UBERON:0000077,5.84e-09,35;UBERON:0007811,1.09e-08,36;UBERON:0000065,1.60e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.94e-07,43;UBERON:0000029,4.10e-07,1;UBERON:0001097,4.10e-07,1;UBERON:0003968,4.10e-07,1;UBERON:0001467,4.10e-07,1|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.513602189793617,0.262261207256992,0.333109761815663,0.202475267389826,0,2.05050407482854,2.60517423850904,0.42438965179803,0.0850432901510698,3.27660138962921,1.56719873483361,0.639969691173627,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.58937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.441683036920787,0,0,0,0,0.255457055208591,1.67741174308288,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0.457556346413045,0.509935289981566,0.839708713941948,0.690999869022119,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.129920822977795,1.07416017400489,0.596044064343795,0.480781798079875,1.18151621739662,1.11063094942962,1.5241361331,1.41156659191577,1.07203668813728,1.05833025804362,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr12:114664902..114664912,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=320 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:114664902..114664912,- | |||
|description=CAGE_peak_at_chr12:114664902..114664912,- | |||
|id=chr12:114664902..114664912,- | |||
|ontology_enrichment_celltype=CL:0000988!2.56e-10!32;CL:0002032!2.56e-10!32;CL:0000037!2.56e-10!32;CL:0000566!2.56e-10!32;CL:0000837!2.56e-10!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.48e-08,32;CL:0002032,3.48e-08,32;CL:0000037,3.48e-08,32;CL:0000837,3.48e-08,32;CL:0000945,2.75e-07,1;CL:0000236,2.75e-07,1;CL:0000826,2.75e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.55e-21!48;UBERON:0002390!3.62e-18!45;UBERON:0003061!3.62e-18!45;UBERON:0004177!7.90e-17!29;UBERON:0002405!3.50e-16!70;UBERON:0002370!4.80e-11!23;UBERON:0000974!4.80e-11!23;UBERON:0004807!4.80e-11!23;UBERON:0005058!4.80e-11!23;UBERON:0003351!4.80e-11!23;UBERON:0009113!4.80e-11!23;UBERON:0003295!4.80e-11!23;UBERON:0009722!4.80e-11!23;UBERON:0005562!4.80e-11!23;UBERON:0007690!4.80e-11!23;UBERON:0005057!8.37e-11!51;UBERON:0006562!2.09e-10!24;UBERON:0003408!2.09e-10!24;UBERON:0001557!2.09e-10!24;UBERON:0001042!2.09e-10!24;UBERON:0008814!2.09e-10!24;UBERON:0009145!2.09e-10!24;UBERON:0003081!6.24e-09!88;UBERON:0000072!8.69e-09!27;UBERON:0000065!1.94e-08!41;UBERON:0001004!4.11e-08!42;UBERON:0002106!1.03e-07!6;UBERON:0004457!1.03e-07!6;UBERON:0000042!1.03e-07!6;UBERON:0004854!1.03e-07!6;UBERON:0009034!1.03e-07!6;UBERON:0002095!1.03e-07!6;UBERON:0004782!1.03e-07!6;UBERON:0003281!1.03e-07!6;UBERON:0009664!1.03e-07!6;UBERON:0002296!1.03e-07!6;UBERON:0005602!1.03e-07!6;UBERON:0001179!1.03e-07!6;UBERON:0006293!1.03e-07!6;UBERON:0000063!8.86e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.53e-14,23;UBERON:0000974,4.53e-14,23;UBERON:0004807,4.53e-14,23;UBERON:0005058,4.53e-14,23;UBERON:0003351,4.53e-14,23;UBERON:0009113,4.53e-14,23;UBERON:0003295,4.53e-14,23;UBERON:0009722,4.53e-14,23;UBERON:0005562,4.53e-14,23;UBERON:0007690,4.53e-14,23;UBERON:0006562,1.89e-13,24;UBERON:0003408,1.89e-13,24;UBERON:0001557,1.89e-13,24;UBERON:0001042,1.89e-13,24;UBERON:0008814,1.89e-13,24;UBERON:0009145,1.89e-13,24;UBERON:0002193,2.14e-12,48;UBERON:0002405,2.14e-12,48;UBERON:0000072,7.26e-12,27;UBERON:0004177,5.45e-11,29;UBERON:0005057,5.45e-11,29;UBERON:0002390,7.45e-11,45;UBERON:0003061,7.45e-11,45;UBERON:0000077,5.84e-09,35;UBERON:0007811,1.09e-08,36;UBERON:0000065,1.60e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.94e-07,43;UBERON:0000029,4.10e-07,1;UBERON:0001097,4.10e-07,1;UBERON:0003968,4.10e-07,1;UBERON:0001467,4.10e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.513602189793617,0.262261207256992,0.333109761815663,0.202475267389826,0,2.05050407482854,2.60517423850904,0.42438965179803,0.0850432901510698,3.27660138962921,1.56719873483361,0.639969691173627,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.58937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.441683036920787,0,0,0,0,0.255457055208591,1.67741174308288,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0.457556346413045,0.509935289981566,0.839708713941948,0.690999869022119,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.129920822977795,1.07416017400489,0.596044064343795,0.480781798079875,1.18151621739662,1.11063094942962,1.5241361331,1.41156659191577,1.07203668813728,1.05833025804362,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr12:114664902..114664912,- | |||
}} |
Latest revision as of 19:53, 4 August 2015
Short description: | p@chr12:114664902..114664912, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114664902..114664912, - |
Coexpression cluster: | MCL_coexpression_mm9:320 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.48e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.48e-08 | 32 |
hematopoietic stem cell | 3.48e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.48e-08 | 32 |
lymphocyte of B lineage | 2.75e-07 | 1 |
B cell | 2.75e-07 | 1 |
pro-B cell | 2.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.53e-14 | 23 |
neck | 4.53e-14 | 23 |
respiratory system epithelium | 4.53e-14 | 23 |
hemolymphoid system gland | 4.53e-14 | 23 |
pharyngeal epithelium | 4.53e-14 | 23 |
thymic region | 4.53e-14 | 23 |
pharyngeal gland | 4.53e-14 | 23 |
entire pharyngeal arch endoderm | 4.53e-14 | 23 |
thymus primordium | 4.53e-14 | 23 |
early pharyngeal endoderm | 4.53e-14 | 23 |
pharynx | 1.89e-13 | 24 |
gland of gut | 1.89e-13 | 24 |
upper respiratory tract | 1.89e-13 | 24 |
chordate pharynx | 1.89e-13 | 24 |
pharyngeal arch system | 1.89e-13 | 24 |
pharyngeal region of foregut | 1.89e-13 | 24 |
hemolymphoid system | 2.14e-12 | 48 |
immune system | 2.14e-12 | 48 |
segment of respiratory tract | 7.26e-12 | 27 |
hemopoietic organ | 5.45e-11 | 29 |
immune organ | 5.45e-11 | 29 |
hematopoietic system | 7.45e-11 | 45 |
blood island | 7.45e-11 | 45 |
mixed endoderm/mesoderm-derived structure | 5.84e-09 | 35 |
craniocervical region | 1.09e-08 | 36 |
respiratory tract | 1.60e-07 | 41 |
respiratory system | 2.54e-07 | 42 |
anterior region of body | 3.94e-07 | 43 |
lymph node | 4.10e-07 | 1 |
axillary lymph node | 4.10e-07 | 1 |
peripheral lymph node | 4.10e-07 | 1 |
shoulder | 4.10e-07 | 1 |