FFCP PHASE1:Mm9::chr4:128798943..128798978,-: Difference between revisions
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{{FFCP|EntrezGene=15444|HGNC=|MCL_coexpression_id=1119|UniProt=A2A7R6|association_with_transcript=0bp_to_ENSMUST00000135763_5end|description=CAGE_peak_2_at_Hpca_5end|id=chr4:128798943..128798978,-|ontology_enrichment_celltype=CL:0000117!1.07e-19!23;CL:0000337!1.07e-19!23;CL:0000540!5.54e-15!33;CL:0000047!5.54e-15!33;CL:0000031!5.54e-15!33;CL:0000404!5.54e-15!33;CL:0000393!3.93e-11!39;CL:0000211!3.93e-11!39;CL:0002319!5.41e-10!43;CL:0000221!1.51e-09!44;CL:0000133!1.51e-09!44;CL:0000055!2.63e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-27,23;CL:0000337,2.53e-27,23;CL:0000540,2.53e-17,33;CL:0000047,2.53e-17,33;CL:0000031,2.53e-17,33;CL:0000404,2.53e-17,33;CL:0000393,8.24e-14,39;CL:0000211,8.24e-14,39;CL:0002319,5.04e-12,43;CL:0000221,1.25e-11,44;CL:0000133,1.25e-11,44;CL:0002612,5.68e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.78e-27!73;UBERON:0005743!6.78e-27!73;UBERON:0000073!1.31e-25!75;UBERON:0001016!1.31e-25!75;UBERON:0001049!2.31e-25!52;UBERON:0005068!2.31e-25!52;UBERON:0006241!2.31e-25!52;UBERON:0007135!2.31e-25!52;UBERON:0002020!6.68e-25!34;UBERON:0000033!2.18e-24!63;UBERON:0002346!1.14e-23!71;UBERON:0003075!1.14e-23!71;UBERON:0007284!1.14e-23!71;UBERON:0000955!4.63e-23!50;UBERON:0006238!4.63e-23!50;UBERON:0002616!2.76e-22!49;UBERON:0003056!1.07e-21!49;UBERON:0004121!1.46e-21!102;UBERON:0000924!1.46e-21!102;UBERON:0006601!1.46e-21!102;UBERON:0002791!9.01e-20!29;UBERON:0003528!9.01e-20!29;UBERON:0001893!9.01e-20!29;UBERON:0003080!8.80e-19!40;UBERON:0002780!6.23e-18!39;UBERON:0001890!6.23e-18!39;UBERON:0006240!6.23e-18!39;UBERON:0007811!2.99e-14!86;UBERON:0000956!5.67e-13!21;UBERON:0001869!5.67e-13!21;UBERON:0000203!5.67e-13!21;UBERON:0000153!1.40e-11!94;UBERON:0002619!2.84e-10!17;UBERON:0002021!4.03e-09!10;UBERON:0000411!4.03e-09!10;UBERON:0001950!4.03e-09!10;UBERON:0002420!3.86e-08!8;UBERON:0007245!3.86e-08!8;UBERON:0010009!3.86e-08!8;UBERON:0010011!3.86e-08!8;UBERON:0000454!3.86e-08!8;UBERON:0002240!3.48e-07!6;UBERON:0005174!3.48e-07!6;UBERON:0001137!3.48e-07!6;UBERON:0003076!3.87e-07!12;UBERON:0003057!3.87e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.12e-40,54;UBERON:0002020,3.08e-38,34;UBERON:0001049,1.09e-36,52;UBERON:0005068,1.09e-36,52;UBERON:0006241,1.09e-36,52;UBERON:0007135,1.09e-36,52;UBERON:0001017,1.65e-36,73;UBERON:0001016,3.02e-35,75;UBERON:0002346,2.45e-33,64;UBERON:0003075,2.45e-33,64;UBERON:0007284,2.45e-33,64;UBERON:0004121,6.42e-30,95;UBERON:0000924,6.42e-30,95;UBERON:0006601,6.42e-30,95;UBERON:0003528,4.14e-29,29;UBERON:0002791,4.14e-29,29;UBERON:0001893,4.14e-29,29;UBERON:0000955,2.91e-28,47;UBERON:0006238,2.91e-28,47;UBERON:0010371,5.59e-28,73;UBERON:0002616,5.65e-27,46;UBERON:0003080,1.04e-25,40;UBERON:0003056,1.25e-24,49;UBERON:0002780,2.92e-24,39;UBERON:0001890,2.92e-24,39;UBERON:0006240,2.92e-24,39;UBERON:0010314,4.04e-20,92;UBERON:0000956,3.81e-17,21;UBERON:0001869,3.81e-17,21;UBERON:0000203,3.81e-17,21;UBERON:0002021,1.76e-15,10;UBERON:0000411,1.76e-15,10;UBERON:0001950,1.76e-15,10;UBERON:0002619,2.50e-14,17;UBERON:0002420,1.12e-13,8;UBERON:0007245,1.12e-13,8;UBERON:0010009,1.12e-13,8;UBERON:0010011,1.12e-13,8;UBERON:0000454,1.12e-13,8;UBERON:0002240,6.34e-12,6;UBERON:0005174,6.34e-12,6;UBERON:0001137,6.34e-12,6;UBERON:0000025,1.38e-11,114;UBERON:0003076,4.21e-11,12;UBERON:0003057,4.21e-11,12;UBERON:0001948,1.39e-10,5;UBERON:0002315,1.39e-10,5;UBERON:0004111,3.13e-10,122;UBERON:0000369,2.17e-09,5;UBERON:0002435,2.17e-09,5;UBERON:0000204,2.17e-09,5;UBERON:0010082,2.17e-09,5;UBERON:0002950,2.01e-07,4;UBERON:0001891,2.01e-07,4;UBERON:0009616,2.01e-07,4;UBERON:0010286,2.01e-07,4;UBERON:0011216,4.56e-07,194;UBERON:0002257,5.68e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,6.87688273053643,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.829516898467821,1.21505344498522,1.26194976810829,11.4260393761521,9.27647871996777,1.46988959057945,0.670918297127655,0.919218786610021,8.8092704799511,3.06449611404451,2.91852413186863,2.1101806036831,3.56801810049398,2.6045668527838,2.23346399201105,3.93933827022176,1.98637722109853,14.142172102736,11.5321061447273,5.40558392893372,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,1.46612694769419,0,0,0,0,4.04434726393021,10.980014467647,6.03140890141749,5.21472960576829,5.11430914660661,4.77912502486988,4.05603157669394,0,0,0,0.420883711772948,0.130120442962704,0.459804208866946,0.360124259610698,0,1.02054748726992,1.0249097622788,1.96773621575431,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1408762966172,1.13195073617213,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15444 | |||
|HGNC= | |||
|MCL_coexpression_id=1119 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2A7R6 | |||
|association_with_transcript=0bp_to_ENSMUST00000135763_5end | |||
|cluster_id=chr4:128798943..128798978,- | |||
|description=CAGE_peak_2_at_Hpca_5end | |||
|id=chr4:128798943..128798978,- | |||
|ontology_enrichment_celltype=CL:0000117!1.07e-19!23;CL:0000337!1.07e-19!23;CL:0000540!5.54e-15!33;CL:0000047!5.54e-15!33;CL:0000031!5.54e-15!33;CL:0000404!5.54e-15!33;CL:0000393!3.93e-11!39;CL:0000211!3.93e-11!39;CL:0002319!5.41e-10!43;CL:0000221!1.51e-09!44;CL:0000133!1.51e-09!44;CL:0000055!2.63e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-27,23;CL:0000337,2.53e-27,23;CL:0000540,2.53e-17,33;CL:0000047,2.53e-17,33;CL:0000031,2.53e-17,33;CL:0000404,2.53e-17,33;CL:0000393,8.24e-14,39;CL:0000211,8.24e-14,39;CL:0002319,5.04e-12,43;CL:0000221,1.25e-11,44;CL:0000133,1.25e-11,44;CL:0002612,5.68e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.78e-27!73;UBERON:0005743!6.78e-27!73;UBERON:0000073!1.31e-25!75;UBERON:0001016!1.31e-25!75;UBERON:0001049!2.31e-25!52;UBERON:0005068!2.31e-25!52;UBERON:0006241!2.31e-25!52;UBERON:0007135!2.31e-25!52;UBERON:0002020!6.68e-25!34;UBERON:0000033!2.18e-24!63;UBERON:0002346!1.14e-23!71;UBERON:0003075!1.14e-23!71;UBERON:0007284!1.14e-23!71;UBERON:0000955!4.63e-23!50;UBERON:0006238!4.63e-23!50;UBERON:0002616!2.76e-22!49;UBERON:0003056!1.07e-21!49;UBERON:0004121!1.46e-21!102;UBERON:0000924!1.46e-21!102;UBERON:0006601!1.46e-21!102;UBERON:0002791!9.01e-20!29;UBERON:0003528!9.01e-20!29;UBERON:0001893!9.01e-20!29;UBERON:0003080!8.80e-19!40;UBERON:0002780!6.23e-18!39;UBERON:0001890!6.23e-18!39;UBERON:0006240!6.23e-18!39;UBERON:0007811!2.99e-14!86;UBERON:0000956!5.67e-13!21;UBERON:0001869!5.67e-13!21;UBERON:0000203!5.67e-13!21;UBERON:0000153!1.40e-11!94;UBERON:0002619!2.84e-10!17;UBERON:0002021!4.03e-09!10;UBERON:0000411!4.03e-09!10;UBERON:0001950!4.03e-09!10;UBERON:0002420!3.86e-08!8;UBERON:0007245!3.86e-08!8;UBERON:0010009!3.86e-08!8;UBERON:0010011!3.86e-08!8;UBERON:0000454!3.86e-08!8;UBERON:0002240!3.48e-07!6;UBERON:0005174!3.48e-07!6;UBERON:0001137!3.48e-07!6;UBERON:0003076!3.87e-07!12;UBERON:0003057!3.87e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.12e-40,54;UBERON:0002020,3.08e-38,34;UBERON:0001049,1.09e-36,52;UBERON:0005068,1.09e-36,52;UBERON:0006241,1.09e-36,52;UBERON:0007135,1.09e-36,52;UBERON:0001017,1.65e-36,73;UBERON:0001016,3.02e-35,75;UBERON:0002346,2.45e-33,64;UBERON:0003075,2.45e-33,64;UBERON:0007284,2.45e-33,64;UBERON:0004121,6.42e-30,95;UBERON:0000924,6.42e-30,95;UBERON:0006601,6.42e-30,95;UBERON:0003528,4.14e-29,29;UBERON:0002791,4.14e-29,29;UBERON:0001893,4.14e-29,29;UBERON:0000955,2.91e-28,47;UBERON:0006238,2.91e-28,47;UBERON:0010371,5.59e-28,73;UBERON:0002616,5.65e-27,46;UBERON:0003080,1.04e-25,40;UBERON:0003056,1.25e-24,49;UBERON:0002780,2.92e-24,39;UBERON:0001890,2.92e-24,39;UBERON:0006240,2.92e-24,39;UBERON:0010314,4.04e-20,92;UBERON:0000956,3.81e-17,21;UBERON:0001869,3.81e-17,21;UBERON:0000203,3.81e-17,21;UBERON:0002021,1.76e-15,10;UBERON:0000411,1.76e-15,10;UBERON:0001950,1.76e-15,10;UBERON:0002619,2.50e-14,17;UBERON:0002420,1.12e-13,8;UBERON:0007245,1.12e-13,8;UBERON:0010009,1.12e-13,8;UBERON:0010011,1.12e-13,8;UBERON:0000454,1.12e-13,8;UBERON:0002240,6.34e-12,6;UBERON:0005174,6.34e-12,6;UBERON:0001137,6.34e-12,6;UBERON:0000025,1.38e-11,114;UBERON:0003076,4.21e-11,12;UBERON:0003057,4.21e-11,12;UBERON:0001948,1.39e-10,5;UBERON:0002315,1.39e-10,5;UBERON:0004111,3.13e-10,122;UBERON:0000369,2.17e-09,5;UBERON:0002435,2.17e-09,5;UBERON:0000204,2.17e-09,5;UBERON:0010082,2.17e-09,5;UBERON:0002950,2.01e-07,4;UBERON:0001891,2.01e-07,4;UBERON:0009616,2.01e-07,4;UBERON:0010286,2.01e-07,4;UBERON:0011216,4.56e-07,194;UBERON:0002257,5.68e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,6.87688273053643,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.829516898467821,1.21505344498522,1.26194976810829,11.4260393761521,9.27647871996777,1.46988959057945,0.670918297127655,0.919218786610021,8.8092704799511,3.06449611404451,2.91852413186863,2.1101806036831,3.56801810049398,2.6045668527838,2.23346399201105,3.93933827022176,1.98637722109853,14.142172102736,11.5321061447273,5.40558392893372,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,1.46612694769419,0,0,0,0,4.04434726393021,10.980014467647,6.03140890141749,5.21472960576829,5.11430914660661,4.77912502486988,4.05603157669394,0,0,0,0.420883711772948,0.130120442962704,0.459804208866946,0.360124259610698,0,1.02054748726992,1.0249097622788,1.96773621575431,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1408762966172,1.13195073617213,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.17211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,1.60660658210904,0,0,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.913394847343798,0,1.0591603543191,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,1.03111909406213,2.74033007908257,6.7985450765073,4.05013500139084,3.60256962579376,5.43770890781046,4.65984280576638,0.103787347584177,0,0,0.243106717068294,0.838452650511929,0.735374033800057,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.377252682772152,0.655490552289177,0.832326981263301,0.918967503289812,1.42888107384922,0.463537303779422,0.38581844092741,1.23625770240992,0.883193520806384,0.685738504770831,0.532427418478012,0.715308569841963,1.16277133305863,0.941093804153306,0.507687647350059,0.365855945745545,0,1.08643291076689,0.561142271657738,0.711810108745045,0.689531376628944,0,0.309873682371932,0.578719832943424,1.74867404556562,0.467863216890817,0.429742108096597,0.382576664137687,0.661774257358546,0.231867835620421 | |||
|short_description=p2@Hpca | |||
}} |
Revision as of 19:12, 4 August 2015
Short description: | p2@Hpca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hpca_5end |
Coexpression cluster: | MCL_coexpression_mm9:1119 |
Association with transcript: | 0bp_to_ENSMUST00000135763_5end |
EntrezGene: | 15444 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.53e-27 | 23 |
neuroblast (sensu Vertebrata) | 2.53e-27 | 23 |
neuron | 2.53e-17 | 33 |
neuronal stem cell | 2.53e-17 | 33 |
neuroblast | 2.53e-17 | 33 |
electrically signaling cell | 2.53e-17 | 33 |
electrically responsive cell | 8.24e-14 | 39 |
electrically active cell | 8.24e-14 | 39 |
neural cell | 5.04e-12 | 43 |
ectodermal cell | 1.25e-11 | 44 |
neurectodermal cell | 1.25e-11 | 44 |
neuron of the ventral spinal cord | 5.68e-07 | 3 |