FFCP PHASE1:Mm9::chr7:25266999..25267006,+: Difference between revisions
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{{FFCP|EntrezGene=260299|HGNC=|MCL_coexpression_id=747|UniProt=Q8R464|association_with_transcript=-35bp_to_ENSMUST00000068023,NM_153112,uc009fps.1_5end|description=CAGE_peak_2_at_Cadm4_5end|id=chr7:25266999..25267006,+|ontology_enrichment_celltype=CL:0000221!8.02e-23!44;CL:0000133!8.02e-23!44;CL:0002319!3.53e-22!43;CL:0000055!3.82e-19!50;CL:0000117!5.26e-18!23;CL:0000337!5.26e-18!23;CL:0000540!2.30e-15!33;CL:0000047!2.30e-15!33;CL:0000031!2.30e-15!33;CL:0000404!2.30e-15!33;CL:0000393!2.50e-13!39;CL:0000211!2.50e-13!39;CL:0002321!3.01e-12!70;CL:0000220!3.01e-12!70;CL:0000333!7.77e-08!10;CL:0000095!7.77e-08!10;CL:0000243!7.77e-08!10;CL:0000123!7.77e-08!10;CL:0000125!7.77e-08!10;CL:0000030!7.77e-08!10;CL:0000339!7.77e-08!10|ontology_enrichment_celltype_v019_2=CL:0000117,3.17e-32,23;CL:0000337,3.17e-32,23;CL:0002319,5.11e-32,43;CL:0000221,3.43e-31,44;CL:0000133,3.43e-31,44;CL:0000540,1.89e-21,33;CL:0000047,1.89e-21,33;CL:0000031,1.89e-21,33;CL:0000404,1.89e-21,33;CL:0002321,5.82e-18,70;CL:0000393,1.23e-17,39;CL:0000211,1.23e-17,39;CL:0002453,2.03e-14,8;CL:0000333,2.09e-11,10;CL:0000095,2.09e-11,10;CL:0000243,2.09e-11,10;CL:0000123,2.09e-11,10;CL:0000125,2.09e-11,10;CL:0000030,2.09e-11,10;CL:0000339,2.09e-11,10;CL:0002614,7.17e-11,3;CL:0002613,1.10e-09,3;CL:0000128,7.54e-09,6;CL:0000126,7.54e-09,6;CL:0000127,7.54e-09,6;CL:0000878,8.02e-08,2;CL:0000129,8.02e-08,2;CL:0000723,9.98e-08,91;CL:0000048,9.98e-08,91;CL:0002611,1.25e-07,2;CL:0000034,5.08e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.74e-38!75;UBERON:0001016!1.74e-38!75;UBERON:0001017!6.97e-37!73;UBERON:0005743!6.97e-37!73;UBERON:0004121!7.47e-34!102;UBERON:0000924!7.47e-34!102;UBERON:0006601!7.47e-34!102;UBERON:0001049!6.72e-30!52;UBERON:0005068!6.72e-30!52;UBERON:0006241!6.72e-30!52;UBERON:0007135!6.72e-30!52;UBERON:0002346!1.64e-28!71;UBERON:0003075!1.64e-28!71;UBERON:0007284!1.64e-28!71;UBERON:0000955!4.25e-26!50;UBERON:0006238!4.25e-26!50;UBERON:0000033!4.53e-26!63;UBERON:0002616!1.34e-25!49;UBERON:0002020!2.95e-23!34;UBERON:0003056!1.38e-22!49;UBERON:0003080!3.45e-21!40;UBERON:0002780!1.82e-20!39;UBERON:0001890!1.82e-20!39;UBERON:0006240!1.82e-20!39;UBERON:0002791!8.55e-19!29;UBERON:0003528!8.55e-19!29;UBERON:0001893!8.55e-19!29;UBERON:0007811!1.07e-14!86;UBERON:0000153!1.52e-12!94;UBERON:0000956!6.93e-12!21;UBERON:0001869!6.93e-12!21;UBERON:0000203!6.93e-12!21;UBERON:0002619!2.13e-09!17;UBERON:0003076!4.07e-09!12;UBERON:0003057!4.07e-09!12;UBERON:0000025!2.14e-08!114;UBERON:0002420!2.19e-08!8;UBERON:0007245!2.19e-08!8;UBERON:0010009!2.19e-08!8;UBERON:0010011!2.19e-08!8;UBERON:0000454!2.19e-08!8;UBERON:0004111!2.33e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0000073,6.49e-26,54;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0002020,1.26e-22,34;UBERON:0001049,6.33e-22,52;UBERON:0005068,6.33e-22,52;UBERON:0006241,6.33e-22,52;UBERON:0007135,6.33e-22,52;UBERON:0002420,1.08e-18,8;UBERON:0007245,1.08e-18,8;UBERON:0010009,1.08e-18,8;UBERON:0010011,1.08e-18,8;UBERON:0000454,1.08e-18,8;UBERON:0002346,5.06e-17,64;UBERON:0003075,5.06e-17,64;UBERON:0007284,5.06e-17,64;UBERON:0002616,1.27e-15,46;UBERON:0000955,3.24e-15,47;UBERON:0006238,3.24e-15,47;UBERON:0003528,4.78e-15,29;UBERON:0002791,4.78e-15,29;UBERON:0001893,4.78e-15,29;UBERON:0010371,2.12e-14,73;UBERON:0002780,2.54e-12,39;UBERON:0001890,2.54e-12,39;UBERON:0006240,2.54e-12,39;UBERON:0003076,2.81e-12,12;UBERON:0003057,2.81e-12,12;UBERON:0003080,6.04e-12,40;UBERON:0002038,7.17e-11,3;UBERON:0009663,7.17e-11,3;UBERON:0009661,7.17e-11,3;UBERON:0000125,7.17e-11,3;UBERON:0002308,7.17e-11,3;UBERON:0001948,1.46e-10,5;UBERON:0002315,1.46e-10,5;UBERON:0010314,1.50e-10,92;UBERON:0000369,7.75e-10,5;UBERON:0002435,7.75e-10,5;UBERON:0000204,7.75e-10,5;UBERON:0010082,7.75e-10,5;UBERON:0003056,3.01e-09,49;UBERON:0002240,8.28e-09,6;UBERON:0005174,8.28e-09,6;UBERON:0001137,8.28e-09,6;UBERON:0011216,1.08e-08,194;UBERON:0002950,3.01e-08,4;UBERON:0001891,3.01e-08,4;UBERON:0009616,3.01e-08,4;UBERON:0010286,3.01e-08,4;UBERON:0000025,1.07e-07,114;UBERON:0002256,1.25e-07,2;UBERON:0004111,6.48e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,2.61630187656536,1.5378032791413,0.972149495371417,1.53985063787899,5.75010257459886,0,0,0,0,0,0.515672092277442,1.61853168687678,0.528990979272033,3.1691570175309,0.338844532069132,0,0,0,0,2.09720077362883,6.91592949578798,0.829516898467821,1.08004750665353,0.210324961351382,3.99911378165325,1.98781686856452,0.489963196859816,1.24599112323707,0.919218786610021,0,2.29837208553338,1.99688493233117,1.45074916503213,1.28082701043374,2.08365348222704,4.4669279840221,2.8138130501584,2.13917546887534,0.589257170947335,1.85083185038834,1.86399445825301,0.984440513331393,0.453429360640713,0,0,0.679971333707751,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0.649473123033642,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0.585561594023094,1.8850203613211,0,0,0,0,0.748953197024114,1.37250180845588,0.628271760564322,1.04294592115366,0.767146371990992,1.24672826735736,0.973447578406546,0,0,0,0.210441855886474,0,0.229902104433473,0.540186389416048,0.30140963567143,0,0.12811372028485,0.468508622798644,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.52375192569864,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0.532020700926821,0,0.493647061806363,0.608929898229199,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.352071715937262,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0,1.03552062350364,0,0.798049746802062,0.341467211508268,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0,0.441182838239031,0|short_description=p2@Cadm4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:260299 | |||
|HGNC= | |||
|MCL_coexpression_id=747 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R464 | |||
|association_with_transcript=-35bp_to_ENSMUST00000068023,NM_153112,uc009fps.1_5end | |||
|cluster_id=chr7:25266999..25267006,+ | |||
|description=CAGE_peak_2_at_Cadm4_5end | |||
|id=chr7:25266999..25267006,+ | |||
|ontology_enrichment_celltype=CL:0000221!8.02e-23!44;CL:0000133!8.02e-23!44;CL:0002319!3.53e-22!43;CL:0000055!3.82e-19!50;CL:0000117!5.26e-18!23;CL:0000337!5.26e-18!23;CL:0000540!2.30e-15!33;CL:0000047!2.30e-15!33;CL:0000031!2.30e-15!33;CL:0000404!2.30e-15!33;CL:0000393!2.50e-13!39;CL:0000211!2.50e-13!39;CL:0002321!3.01e-12!70;CL:0000220!3.01e-12!70;CL:0000333!7.77e-08!10;CL:0000095!7.77e-08!10;CL:0000243!7.77e-08!10;CL:0000123!7.77e-08!10;CL:0000125!7.77e-08!10;CL:0000030!7.77e-08!10;CL:0000339!7.77e-08!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.17e-32,23;CL:0000337,3.17e-32,23;CL:0002319,5.11e-32,43;CL:0000221,3.43e-31,44;CL:0000133,3.43e-31,44;CL:0000540,1.89e-21,33;CL:0000047,1.89e-21,33;CL:0000031,1.89e-21,33;CL:0000404,1.89e-21,33;CL:0002321,5.82e-18,70;CL:0000393,1.23e-17,39;CL:0000211,1.23e-17,39;CL:0002453,2.03e-14,8;CL:0000333,2.09e-11,10;CL:0000095,2.09e-11,10;CL:0000243,2.09e-11,10;CL:0000123,2.09e-11,10;CL:0000125,2.09e-11,10;CL:0000030,2.09e-11,10;CL:0000339,2.09e-11,10;CL:0002614,7.17e-11,3;CL:0002613,1.10e-09,3;CL:0000128,7.54e-09,6;CL:0000126,7.54e-09,6;CL:0000127,7.54e-09,6;CL:0000878,8.02e-08,2;CL:0000129,8.02e-08,2;CL:0000723,9.98e-08,91;CL:0000048,9.98e-08,91;CL:0002611,1.25e-07,2;CL:0000034,5.08e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.74e-38!75;UBERON:0001016!1.74e-38!75;UBERON:0001017!6.97e-37!73;UBERON:0005743!6.97e-37!73;UBERON:0004121!7.47e-34!102;UBERON:0000924!7.47e-34!102;UBERON:0006601!7.47e-34!102;UBERON:0001049!6.72e-30!52;UBERON:0005068!6.72e-30!52;UBERON:0006241!6.72e-30!52;UBERON:0007135!6.72e-30!52;UBERON:0002346!1.64e-28!71;UBERON:0003075!1.64e-28!71;UBERON:0007284!1.64e-28!71;UBERON:0000955!4.25e-26!50;UBERON:0006238!4.25e-26!50;UBERON:0000033!4.53e-26!63;UBERON:0002616!1.34e-25!49;UBERON:0002020!2.95e-23!34;UBERON:0003056!1.38e-22!49;UBERON:0003080!3.45e-21!40;UBERON:0002780!1.82e-20!39;UBERON:0001890!1.82e-20!39;UBERON:0006240!1.82e-20!39;UBERON:0002791!8.55e-19!29;UBERON:0003528!8.55e-19!29;UBERON:0001893!8.55e-19!29;UBERON:0007811!1.07e-14!86;UBERON:0000153!1.52e-12!94;UBERON:0000956!6.93e-12!21;UBERON:0001869!6.93e-12!21;UBERON:0000203!6.93e-12!21;UBERON:0002619!2.13e-09!17;UBERON:0003076!4.07e-09!12;UBERON:0003057!4.07e-09!12;UBERON:0000025!2.14e-08!114;UBERON:0002420!2.19e-08!8;UBERON:0007245!2.19e-08!8;UBERON:0010009!2.19e-08!8;UBERON:0010011!2.19e-08!8;UBERON:0000454!2.19e-08!8;UBERON:0004111!2.33e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0000073,6.49e-26,54;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0002020,1.26e-22,34;UBERON:0001049,6.33e-22,52;UBERON:0005068,6.33e-22,52;UBERON:0006241,6.33e-22,52;UBERON:0007135,6.33e-22,52;UBERON:0002420,1.08e-18,8;UBERON:0007245,1.08e-18,8;UBERON:0010009,1.08e-18,8;UBERON:0010011,1.08e-18,8;UBERON:0000454,1.08e-18,8;UBERON:0002346,5.06e-17,64;UBERON:0003075,5.06e-17,64;UBERON:0007284,5.06e-17,64;UBERON:0002616,1.27e-15,46;UBERON:0000955,3.24e-15,47;UBERON:0006238,3.24e-15,47;UBERON:0003528,4.78e-15,29;UBERON:0002791,4.78e-15,29;UBERON:0001893,4.78e-15,29;UBERON:0010371,2.12e-14,73;UBERON:0002780,2.54e-12,39;UBERON:0001890,2.54e-12,39;UBERON:0006240,2.54e-12,39;UBERON:0003076,2.81e-12,12;UBERON:0003057,2.81e-12,12;UBERON:0003080,6.04e-12,40;UBERON:0002038,7.17e-11,3;UBERON:0009663,7.17e-11,3;UBERON:0009661,7.17e-11,3;UBERON:0000125,7.17e-11,3;UBERON:0002308,7.17e-11,3;UBERON:0001948,1.46e-10,5;UBERON:0002315,1.46e-10,5;UBERON:0010314,1.50e-10,92;UBERON:0000369,7.75e-10,5;UBERON:0002435,7.75e-10,5;UBERON:0000204,7.75e-10,5;UBERON:0010082,7.75e-10,5;UBERON:0003056,3.01e-09,49;UBERON:0002240,8.28e-09,6;UBERON:0005174,8.28e-09,6;UBERON:0001137,8.28e-09,6;UBERON:0011216,1.08e-08,194;UBERON:0002950,3.01e-08,4;UBERON:0001891,3.01e-08,4;UBERON:0009616,3.01e-08,4;UBERON:0010286,3.01e-08,4;UBERON:0000025,1.07e-07,114;UBERON:0002256,1.25e-07,2;UBERON:0004111,6.48e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,2.61630187656536,1.5378032791413,0.972149495371417,1.53985063787899,5.75010257459886,0,0,0,0,0,0.515672092277442,1.61853168687678,0.528990979272033,3.1691570175309,0.338844532069132,0,0,0,0,2.09720077362883,6.91592949578798,0.829516898467821,1.08004750665353,0.210324961351382,3.99911378165325,1.98781686856452,0.489963196859816,1.24599112323707,0.919218786610021,0,2.29837208553338,1.99688493233117,1.45074916503213,1.28082701043374,2.08365348222704,4.4669279840221,2.8138130501584,2.13917546887534,0.589257170947335,1.85083185038834,1.86399445825301,0.984440513331393,0.453429360640713,0,0,0.679971333707751,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0.649473123033642,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0.585561594023094,1.8850203613211,0,0,0,0,0.748953197024114,1.37250180845588,0.628271760564322,1.04294592115366,0.767146371990992,1.24672826735736,0.973447578406546,0,0,0,0.210441855886474,0,0.229902104433473,0.540186389416048,0.30140963567143,0,0.12811372028485,0.468508622798644,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.52375192569864,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0.532020700926821,0,0.493647061806363,0.608929898229199,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.352071715937262,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0,1.03552062350364,0,0.798049746802062,0.341467211508268,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p2@Cadm4 | |||
}} |
Revision as of 19:10, 4 August 2015
Short description: | p2@Cadm4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cadm4_5end |
Coexpression cluster: | MCL_coexpression_mm9:747 |
Association with transcript: | -35bp_to_ENSMUST00000068023, NM_153112, uc009fps.1_5end |
EntrezGene: | 260299 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.17e-32 | 23 |
neuroblast (sensu Vertebrata) | 3.17e-32 | 23 |
neural cell | 5.11e-32 | 43 |
ectodermal cell | 3.43e-31 | 44 |
neurectodermal cell | 3.43e-31 | 44 |
neuron | 1.89e-21 | 33 |
neuronal stem cell | 1.89e-21 | 33 |
neuroblast | 1.89e-21 | 33 |
electrically signaling cell | 1.89e-21 | 33 |
embryonic cell | 5.82e-18 | 70 |
electrically responsive cell | 1.23e-17 | 39 |
electrically active cell | 1.23e-17 | 39 |
oligodendrocyte precursor cell | 2.03e-14 | 8 |
migratory neural crest cell | 2.09e-11 | 10 |
neuron associated cell | 2.09e-11 | 10 |
glial cell (sensu Vertebrata) | 2.09e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 2.09e-11 | 10 |
glial cell | 2.09e-11 | 10 |
glioblast | 2.09e-11 | 10 |
glioblast (sensu Vertebrata) | 2.09e-11 | 10 |
neuron of the substantia nigra | 7.17e-11 | 3 |
striatum neuron | 1.10e-09 | 3 |
oligodendrocyte | 7.54e-09 | 6 |
macroglial cell | 7.54e-09 | 6 |
astrocyte | 7.54e-09 | 6 |
central nervous system macrophage | 8.02e-08 | 2 |
microglial cell | 8.02e-08 | 2 |
somatic stem cell | 9.98e-08 | 91 |
multi fate stem cell | 9.98e-08 | 91 |
neuron of the dorsal spinal cord | 1.25e-07 | 2 |
stem cell | 5.08e-07 | 97 |