FFCP PHASE1:Mm9::chr10:75905479..75905501,-: Difference between revisions
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{{FFCP|EntrezGene=18541|HGNC=|UniProt=Q3TQR8|association_with_transcript=29bp_to_ENSMUST00000171940_5end|description=CAGE_peak_4_at_Pcnt_5end|id=chr10:75905479..75905501,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.09e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.15e-10,29;UBERON:0005057,8.15e-10,29;UBERON:0000065,1.90e-08,41;UBERON:0001004,5.20e-08,42;UBERON:0006562,7.50e-08,24;UBERON:0001557,7.50e-08,24;UBERON:0001042,7.50e-08,24;UBERON:0008814,7.50e-08,24;UBERON:0009145,7.50e-08,24;UBERON:0002370,1.67e-07,23;UBERON:0000974,1.67e-07,23;UBERON:0004807,1.67e-07,23;UBERON:0005058,1.67e-07,23;UBERON:0003351,1.67e-07,23;UBERON:0009113,1.67e-07,23;UBERON:0003295,1.67e-07,23;UBERON:0009722,1.67e-07,23;UBERON:0005562,1.67e-07,23;UBERON:0007690,1.67e-07,23;UBERON:0002390,2.23e-07,45;UBERON:0003061,2.23e-07,45;UBERON:0002193,3.53e-07,48;UBERON:0002405,3.53e-07,48;UBERON:0003408,6.33e-07,24|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,1.51232105653415,1.00179145989269,0.33575854382378,1.16806320297763,0.903863264091034,0.281577444303333,0.234064526321993,0.171217968225505,0.398860794976682,2.05440875917447,1.39872643870396,0.666219523631325,1.21485160433896,2.09868563438444,0.946386496074713,0.822686601634433,2.12194825899015,1.44573593256819,1.19149141441062,2.08959831311148,0.47997726838022,0.91763712426868,0,1.29228598847722,0.215471232685889,0.570070258369122,0.252030129759931,0,0.635030673459631,1.23012957516914,0,0.866554859253824,0.997407872150954,0.612508068787107,2.51118978442145,2.3440060335714,1.0470474879476,0.588231488031014,3.41522742479223,1.45653105909346,0,0.101376931219515,0.734187008646726,0,0.872100625521786,0.219686182734472,0.194429899074283,0.55994568650145,0,2.18117387875057,2.17608642603403,3.02484419228218,0.514518872071894,0.286533439938757,1.03134418455488,1.21389876515759,0,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,1.14058573539325,1.21505344498522,1.26194976810829,0.285650984403804,0.220868540951614,0.734944795289724,2.39613677545591,0,0,0.766124028511126,0.614426133024974,0.791317726381163,1.18933936683133,1.04182674111352,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.996601765593721,0.186399445825301,0.151452386666368,0.755715601067855,0.289864488701678,0,0,1.07940638327563,0.649776417447669,0,1.40444420131752,0.681721290312231,1.03914401841148,0,0.422530259330042,2.56652954828636,2.54805239706646,14.2213340630666,0.432982082022428,0.253359865475099,0.505524445014783,0.68510327831436,2.33044095282455,0.445326417194474,0.520455980298408,0,1.84492397804847,1.05505848386836,0.587943535678524,0.502666365318702,1.23597483867187,0.433798070759735,0,1.61766849947409,2.20841518460394,0.969750506270444,1.86391761218122,0.585561594023094,0.83778682725382,0.510914110417183,0.479260498023681,1.79970819298022,0.635351135365324,0.599162557619291,0.457500602818626,0.879580464790051,0.521472960576829,0.255715457330331,0.41557608911912,0.162241263067758,0.407357455401265,0.746441823660558,0.252722758433675,0,1.43132487258974,0.229902104433473,0.900310649026746,0.150704817835715,0.816437989815934,1.0249097622788,1.3118241438362,0.517406741478031,2.15567992932842,0.945530400839096,2.11141348996739,0.657587197282725,0.556094498451196,1.0447564995665,0.61734640922383,0.796137067273973,1.40442637462647,1.02939162845886,0,1.24275463521301,0.469052119962192,1.2604344302271,0.946978942340841,1.18058539048442,1.54267112887378,0.930135779001631,1.07309360559848,0.583826711835847,0.822799249567402,0.820837320395476,0.972825714550269,1.60819986167866,1.3173006917463,0.402619256281115,0,0.514523061896422,0.330418782983798,0.264450566663544,0.426576501070468,0.928946687441754,1.41754207454303,0,0.667134131534611,1.14135375667535,0.474529061544512,0.658795818896044,1.00534083520108,0.795825888164603,0.19496408711912,1.79763881730844,1.29682829924817,1.1948476395262,0.758671603812327,1.71372768914593,1.1270773567308,0.814605311381257,1.16371492300575,1.05203729835478,0.632365371242573,1.47610147979602,0.627994911365499,0.740382983530803,0.296452627087149,2.16898637430922,1.37591296579242,2.24862112384854,1.82574109249653,0.482354319504834,1.78238096246994,1.72617682470486,0.810676133875177,0.549122826376163,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,1.10851914099963,0.568474235311454,1.79261474086228,1.86719594352707,1.40814148973101,1.34005005953453,1.6663054862021,1.17080188714679,0.472905432318573,0.44292937929755,1.91345722388985,1.63863314715738,0.518054945597687,2.31438493730419,3.01582567878545,0.54390568381871,0.491764273019036,0.827810238914197,0.481651769963376,0.468846746368813,0.163934945376675,0.504941854408746,0.94652465824877,0.780877488593277,0.215423397732799,0.477937595905104,0,0.566153061577665,2.4288642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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18541 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TQR8 | |||
|association_with_transcript=29bp_to_ENSMUST00000171940_5end | |||
|cluster_id=chr10:75905479..75905501,- | |||
|description=CAGE_peak_4_at_Pcnt_5end | |||
|id=chr10:75905479..75905501,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.09e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.15e-10,29;UBERON:0005057,8.15e-10,29;UBERON:0000065,1.90e-08,41;UBERON:0001004,5.20e-08,42;UBERON:0006562,7.50e-08,24;UBERON:0001557,7.50e-08,24;UBERON:0001042,7.50e-08,24;UBERON:0008814,7.50e-08,24;UBERON:0009145,7.50e-08,24;UBERON:0002370,1.67e-07,23;UBERON:0000974,1.67e-07,23;UBERON:0004807,1.67e-07,23;UBERON:0005058,1.67e-07,23;UBERON:0003351,1.67e-07,23;UBERON:0009113,1.67e-07,23;UBERON:0003295,1.67e-07,23;UBERON:0009722,1.67e-07,23;UBERON:0005562,1.67e-07,23;UBERON:0007690,1.67e-07,23;UBERON:0002390,2.23e-07,45;UBERON:0003061,2.23e-07,45;UBERON:0002193,3.53e-07,48;UBERON:0002405,3.53e-07,48;UBERON:0003408,6.33e-07,24 | |||
|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,1.51232105653415,1.00179145989269,0.33575854382378,1.16806320297763,0.903863264091034,0.281577444303333,0.234064526321993,0.171217968225505,0.398860794976682,2.05440875917447,1.39872643870396,0.666219523631325,1.21485160433896,2.09868563438444,0.946386496074713,0.822686601634433,2.12194825899015,1.44573593256819,1.19149141441062,2.08959831311148,0.47997726838022,0.91763712426868,0,1.29228598847722,0.215471232685889,0.570070258369122,0.252030129759931,0,0.635030673459631,1.23012957516914,0,0.866554859253824,0.997407872150954,0.612508068787107,2.51118978442145,2.3440060335714,1.0470474879476,0.588231488031014,3.41522742479223,1.45653105909346,0,0.101376931219515,0.734187008646726,0,0.872100625521786,0.219686182734472,0.194429899074283,0.55994568650145,0,2.18117387875057,2.17608642603403,3.02484419228218,0.514518872071894,0.286533439938757,1.03134418455488,1.21389876515759,0,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,1.14058573539325,1.21505344498522,1.26194976810829,0.285650984403804,0.220868540951614,0.734944795289724,2.39613677545591,0,0,0.766124028511126,0.614426133024974,0.791317726381163,1.18933936683133,1.04182674111352,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.996601765593721,0.186399445825301,0.151452386666368,0.755715601067855,0.289864488701678,0,0,1.07940638327563,0.649776417447669,0,1.40444420131752,0.681721290312231,1.03914401841148,0,0.422530259330042,2.56652954828636,2.54805239706646,14.2213340630666,0.432982082022428,0.253359865475099,0.505524445014783,0.68510327831436,2.33044095282455,0.445326417194474,0.520455980298408,0,1.84492397804847,1.05505848386836,0.587943535678524,0.502666365318702,1.23597483867187,0.433798070759735,0,1.61766849947409,2.20841518460394,0.969750506270444,1.86391761218122,0.585561594023094,0.83778682725382,0.510914110417183,0.479260498023681,1.79970819298022,0.635351135365324,0.599162557619291,0.457500602818626,0.879580464790051,0.521472960576829,0.255715457330331,0.41557608911912,0.162241263067758,0.407357455401265,0.746441823660558,0.252722758433675,0,1.43132487258974,0.229902104433473,0.900310649026746,0.150704817835715,0.816437989815934,1.0249097622788,1.3118241438362,0.517406741478031,2.15567992932842,0.945530400839096,2.11141348996739,0.657587197282725,0.556094498451196,1.0447564995665,0.61734640922383,0.796137067273973,1.40442637462647,1.02939162845886,0,1.24275463521301,0.469052119962192,1.2604344302271,0.946978942340841,1.18058539048442,1.54267112887378,0.930135779001631,1.07309360559848,0.583826711835847,0.822799249567402,0.820837320395476,0.972825714550269,1.60819986167866,1.3173006917463,0.402619256281115,0,0.514523061896422,0.330418782983798,0.264450566663544,0.426576501070468,0.928946687441754,1.41754207454303,0,0.667134131534611,1.14135375667535,0.474529061544512,0.658795818896044,1.00534083520108,0.795825888164603,0.19496408711912,1.79763881730844,1.29682829924817,1.1948476395262,0.758671603812327,1.71372768914593,1.1270773567308,0.814605311381257,1.16371492300575,1.05203729835478,0.632365371242573,1.47610147979602,0.627994911365499,0.740382983530803,0.296452627087149,2.16898637430922,1.37591296579242,2.24862112384854,1.82574109249653,0.482354319504834,1.78238096246994,1.72617682470486,0.810676133875177,0.549122826376163,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,1.10851914099963,0.568474235311454,1.79261474086228,1.86719594352707,1.40814148973101,1.34005005953453,1.6663054862021,1.17080188714679,0.472905432318573,0.44292937929755,1.91345722388985,1.63863314715738,0.518054945597687,2.31438493730419,3.01582567878545,0.54390568381871,0.491764273019036,0.827810238914197,0.481651769963376,0.468846746368813,0.163934945376675,0.504941854408746,0.94652465824877,0.780877488593277,0.215423397732799,0.477937595905104,0,0.566153061577665,2.42886421004937,1.16902343164525,0,0.321321316421807,0.709700426041343,0.35613120733451,0.81443479676788,1.15479086080775,0,0.485561272309963,0.604647113929502,0.377210159511796,0,0.614870295887855,1.03371317267288,1.09060118843252,1.42598951353889,0.632073515871632,0,2.06271086496374,1.36175842301515,1.44048875225048,0.388076051348264,0.857348140126369,1.41872186913819,0.713475270408282,0.822745103010605,1.2178597964584,0,0,0.441056796109924,2.14352128823924,0.484393280087717,1.02531972377865,0.835606408021955,0.656563598980245,0.874442509889552,0.741701208042039,1.53783792718067,1.23832120777933,1.11116716421827,2.82552685507037,1.77702496037333,1.14389086603261,1.5298058699447,0.979660166265606,0.690999869022119,0,1.10717597753397,0.813277868507395,0.756037385752609,0,0.655087691238533,0.539457385539283,0.247960367176008,0.26175594198403,0.90730481304255,0.621339313086926,2.25477175473676,0.897099276263873,0.827292452285488,1.36115831840833,0.258319646955462,0.506868376472335,1.29092962510329,1.0416350787516,1.04859344425711,2.4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| |||
|short_description=p4@Pcnt | |||
}} |
Revision as of 17:16, 4 August 2015
Short description: | p4@Pcnt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pcnt_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENSMUST00000171940_5end |
EntrezGene: | 18541 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 8.15e-10 | 29 |
immune organ | 8.15e-10 | 29 |
respiratory tract | 1.90e-08 | 41 |
respiratory system | 5.20e-08 | 42 |
pharynx | 7.50e-08 | 24 |
upper respiratory tract | 7.50e-08 | 24 |
chordate pharynx | 7.50e-08 | 24 |
pharyngeal arch system | 7.50e-08 | 24 |
pharyngeal region of foregut | 7.50e-08 | 24 |
thymus | 1.67e-07 | 23 |
neck | 1.67e-07 | 23 |
respiratory system epithelium | 1.67e-07 | 23 |
hemolymphoid system gland | 1.67e-07 | 23 |
pharyngeal epithelium | 1.67e-07 | 23 |
thymic region | 1.67e-07 | 23 |
pharyngeal gland | 1.67e-07 | 23 |
entire pharyngeal arch endoderm | 1.67e-07 | 23 |
thymus primordium | 1.67e-07 | 23 |
early pharyngeal endoderm | 1.67e-07 | 23 |
hematopoietic system | 2.23e-07 | 45 |
blood island | 2.23e-07 | 45 |
hemolymphoid system | 3.53e-07 | 48 |
immune system | 3.53e-07 | 48 |
gland of gut | 6.33e-07 | 24 |