FFCP PHASE1:Mm9::chr2:177876581..177876592,+: Difference between revisions
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{{FFCP|EntrezGene=74189|HGNC=|MCL_coexpression_id=13|UniProt=Q8BYK5,A2AHM6|association_with_transcript=-45bp_to_ENSMUST00000103066,NM_028806,uc008ohk.2_5end|description=CAGE_peak_10_at_Phactr3_5end|id=chr2:177876581..177876592,+|ontology_enrichment_celltype=CL:0000117!3.47e-21!23;CL:0000337!3.47e-21!23;CL:0000540!2.71e-20!33;CL:0000047!2.71e-20!33;CL:0000031!2.71e-20!33;CL:0000404!2.71e-20!33;CL:0000393!1.67e-15!39;CL:0000211!1.67e-15!39;CL:0000221!3.01e-14!44;CL:0000133!3.01e-14!44;CL:0002319!6.29e-14!43;CL:0000055!1.51e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.79e-26,23;CL:0000337,1.79e-26,23;CL:0000540,2.30e-17,33;CL:0000047,2.30e-17,33;CL:0000031,2.30e-17,33;CL:0000404,2.30e-17,33;CL:0000393,3.80e-14,39;CL:0000211,3.80e-14,39;CL:0002319,1.68e-12,43;CL:0000221,3.88e-12,44;CL:0000133,3.88e-12,44;CL:0002612,1.84e-09,3;CL:0002613,3.05e-09,3;CL:0000120,1.12e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.08e-33!73;UBERON:0005743!1.08e-33!73;UBERON:0000073!2.67e-33!75;UBERON:0001016!2.67e-33!75;UBERON:0002346!1.00e-30!71;UBERON:0003075!1.00e-30!71;UBERON:0007284!1.00e-30!71;UBERON:0001049!2.52e-29!52;UBERON:0005068!2.52e-29!52;UBERON:0006241!2.52e-29!52;UBERON:0007135!2.52e-29!52;UBERON:0004121!9.37e-29!102;UBERON:0000924!9.37e-29!102;UBERON:0006601!9.37e-29!102;UBERON:0000955!5.11e-27!50;UBERON:0006238!5.11e-27!50;UBERON:0002616!3.61e-26!49;UBERON:0000033!7.98e-25!63;UBERON:0002020!2.03e-23!34;UBERON:0003080!6.26e-22!40;UBERON:0003056!2.33e-21!49;UBERON:0002780!3.42e-21!39;UBERON:0001890!3.42e-21!39;UBERON:0006240!3.42e-21!39;UBERON:0002791!1.17e-18!29;UBERON:0003528!1.17e-18!29;UBERON:0001893!1.17e-18!29;UBERON:0007811!8.90e-14!86;UBERON:0000956!4.27e-12!21;UBERON:0001869!4.27e-12!21;UBERON:0000203!4.27e-12!21;UBERON:0000153!6.01e-12!94;UBERON:0002619!6.32e-09!17;UBERON:0002420!5.82e-08!8;UBERON:0007245!5.82e-08!8;UBERON:0010009!5.82e-08!8;UBERON:0010011!5.82e-08!8;UBERON:0000454!5.82e-08!8;UBERON:0003076!8.86e-08!12;UBERON:0003057!8.86e-08!12;UBERON:0002240!5.72e-07!6;UBERON:0005174!5.72e-07!6;UBERON:0001137!5.72e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.39e-37,34;UBERON:0000073,8.67e-34,54;UBERON:0001049,1.12e-32,52;UBERON:0005068,1.12e-32,52;UBERON:0006241,1.12e-32,52;UBERON:0007135,1.12e-32,52;UBERON:0001017,3.97e-32,73;UBERON:0001016,4.15e-31,75;UBERON:0003528,1.98e-29,29;UBERON:0002791,1.98e-29,29;UBERON:0001893,1.98e-29,29;UBERON:0002780,7.82e-26,39;UBERON:0001890,7.82e-26,39;UBERON:0006240,7.82e-26,39;UBERON:0002346,1.75e-25,64;UBERON:0003075,1.75e-25,64;UBERON:0007284,1.75e-25,64;UBERON:0003080,4.54e-25,40;UBERON:0002616,1.33e-23,46;UBERON:0004121,2.86e-23,95;UBERON:0000924,2.86e-23,95;UBERON:0006601,2.86e-23,95;UBERON:0000955,5.36e-23,47;UBERON:0006238,5.36e-23,47;UBERON:0000956,4.92e-22,21;UBERON:0001869,4.92e-22,21;UBERON:0000203,4.92e-22,21;UBERON:0010371,1.23e-21,73;UBERON:0003056,1.33e-19,49;UBERON:0002619,5.36e-17,17;UBERON:0002021,3.03e-16,10;UBERON:0000411,3.03e-16,10;UBERON:0001950,3.03e-16,10;UBERON:0010314,5.54e-16,92;UBERON:0000025,8.75e-12,114;UBERON:0002240,1.45e-11,6;UBERON:0005174,1.45e-11,6;UBERON:0001137,1.45e-11,6;UBERON:0004111,1.24e-10,122;UBERON:0002257,1.84e-09,3;UBERON:0001948,2.27e-09,5;UBERON:0002315,2.27e-09,5;UBERON:0000369,2.90e-09,5;UBERON:0002435,2.90e-09,5;UBERON:0000204,2.90e-09,5;UBERON:0010082,2.90e-09,5;UBERON:0002420,2.16e-08,8;UBERON:0007245,2.16e-08,8;UBERON:0010009,2.16e-08,8;UBERON:0010011,2.16e-08,8;UBERON:0000454,2.16e-08,8;UBERON:0011216,3.71e-08,194;UBERON:0003076,7.10e-08,12;UBERON:0003057,7.10e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,1.03689612308478,0.540023753326763,1.68259969081106,0.571301968807607,1.54607978666129,0.734944795289724,1.24599112323707,0.919218786610021,1.10115880999389,0.893811366596314,1.68967186581868,2.63772575460388,2.56165402086747,2.08365348222704,1.11673199600552,0.56276261003168,0.763991238884051,3.24091444021034,1.99320353118744,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0.304465478312141,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0.748953197024114,0.457500602818626,1.88481528169297,2.78118912307642,3.3243009452943,1.0389402227978,2.43361894601636,0,0,0,0,0,0.689706313300419,0,0.150704817835715,0.408218994907967,0,0.187403449119458,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,1.02904612379284,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.456994050438915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,2.22702204525186,0,0,0.315508219416257,0.390438744296638,0.861693590931196,0,0,0.283076530788832,0,0.876767573733936,0.790575555893047,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0.428674070063185,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.14579102687879,2.57779773515531,0,4.5323633843382,1.35004500046361,2.70192721934532,1.35942722695261,2.07104124700728,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0,0.183843508450014,1.11123363900808,0.412070114477788,0,0.505394423527595,0.50695859978048,0,0.187283014939765,0.384150914429216,0.0574354689556133,0,0.579421629724277,0.578727661391115,0,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0.543216455383447,0,0.355905054372522,0.197008964751127,0,0.464810523557898,0,0.749431733813838,0.467863216890817,0,0,0,0|short_description=p10@Phactr3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74189 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BYK5,uniprot:A2AHM6 | |||
|association_with_transcript=-45bp_to_ENSMUST00000103066,NM_028806,uc008ohk.2_5end | |||
|cluster_id=chr2:177876581..177876592,+ | |||
|description=CAGE_peak_10_at_Phactr3_5end | |||
|id=chr2:177876581..177876592,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.47e-21!23;CL:0000337!3.47e-21!23;CL:0000540!2.71e-20!33;CL:0000047!2.71e-20!33;CL:0000031!2.71e-20!33;CL:0000404!2.71e-20!33;CL:0000393!1.67e-15!39;CL:0000211!1.67e-15!39;CL:0000221!3.01e-14!44;CL:0000133!3.01e-14!44;CL:0002319!6.29e-14!43;CL:0000055!1.51e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.79e-26,23;CL:0000337,1.79e-26,23;CL:0000540,2.30e-17,33;CL:0000047,2.30e-17,33;CL:0000031,2.30e-17,33;CL:0000404,2.30e-17,33;CL:0000393,3.80e-14,39;CL:0000211,3.80e-14,39;CL:0002319,1.68e-12,43;CL:0000221,3.88e-12,44;CL:0000133,3.88e-12,44;CL:0002612,1.84e-09,3;CL:0002613,3.05e-09,3;CL:0000120,1.12e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.08e-33!73;UBERON:0005743!1.08e-33!73;UBERON:0000073!2.67e-33!75;UBERON:0001016!2.67e-33!75;UBERON:0002346!1.00e-30!71;UBERON:0003075!1.00e-30!71;UBERON:0007284!1.00e-30!71;UBERON:0001049!2.52e-29!52;UBERON:0005068!2.52e-29!52;UBERON:0006241!2.52e-29!52;UBERON:0007135!2.52e-29!52;UBERON:0004121!9.37e-29!102;UBERON:0000924!9.37e-29!102;UBERON:0006601!9.37e-29!102;UBERON:0000955!5.11e-27!50;UBERON:0006238!5.11e-27!50;UBERON:0002616!3.61e-26!49;UBERON:0000033!7.98e-25!63;UBERON:0002020!2.03e-23!34;UBERON:0003080!6.26e-22!40;UBERON:0003056!2.33e-21!49;UBERON:0002780!3.42e-21!39;UBERON:0001890!3.42e-21!39;UBERON:0006240!3.42e-21!39;UBERON:0002791!1.17e-18!29;UBERON:0003528!1.17e-18!29;UBERON:0001893!1.17e-18!29;UBERON:0007811!8.90e-14!86;UBERON:0000956!4.27e-12!21;UBERON:0001869!4.27e-12!21;UBERON:0000203!4.27e-12!21;UBERON:0000153!6.01e-12!94;UBERON:0002619!6.32e-09!17;UBERON:0002420!5.82e-08!8;UBERON:0007245!5.82e-08!8;UBERON:0010009!5.82e-08!8;UBERON:0010011!5.82e-08!8;UBERON:0000454!5.82e-08!8;UBERON:0003076!8.86e-08!12;UBERON:0003057!8.86e-08!12;UBERON:0002240!5.72e-07!6;UBERON:0005174!5.72e-07!6;UBERON:0001137!5.72e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.39e-37,34;UBERON:0000073,8.67e-34,54;UBERON:0001049,1.12e-32,52;UBERON:0005068,1.12e-32,52;UBERON:0006241,1.12e-32,52;UBERON:0007135,1.12e-32,52;UBERON:0001017,3.97e-32,73;UBERON:0001016,4.15e-31,75;UBERON:0003528,1.98e-29,29;UBERON:0002791,1.98e-29,29;UBERON:0001893,1.98e-29,29;UBERON:0002780,7.82e-26,39;UBERON:0001890,7.82e-26,39;UBERON:0006240,7.82e-26,39;UBERON:0002346,1.75e-25,64;UBERON:0003075,1.75e-25,64;UBERON:0007284,1.75e-25,64;UBERON:0003080,4.54e-25,40;UBERON:0002616,1.33e-23,46;UBERON:0004121,2.86e-23,95;UBERON:0000924,2.86e-23,95;UBERON:0006601,2.86e-23,95;UBERON:0000955,5.36e-23,47;UBERON:0006238,5.36e-23,47;UBERON:0000956,4.92e-22,21;UBERON:0001869,4.92e-22,21;UBERON:0000203,4.92e-22,21;UBERON:0010371,1.23e-21,73;UBERON:0003056,1.33e-19,49;UBERON:0002619,5.36e-17,17;UBERON:0002021,3.03e-16,10;UBERON:0000411,3.03e-16,10;UBERON:0001950,3.03e-16,10;UBERON:0010314,5.54e-16,92;UBERON:0000025,8.75e-12,114;UBERON:0002240,1.45e-11,6;UBERON:0005174,1.45e-11,6;UBERON:0001137,1.45e-11,6;UBERON:0004111,1.24e-10,122;UBERON:0002257,1.84e-09,3;UBERON:0001948,2.27e-09,5;UBERON:0002315,2.27e-09,5;UBERON:0000369,2.90e-09,5;UBERON:0002435,2.90e-09,5;UBERON:0000204,2.90e-09,5;UBERON:0010082,2.90e-09,5;UBERON:0002420,2.16e-08,8;UBERON:0007245,2.16e-08,8;UBERON:0010009,2.16e-08,8;UBERON:0010011,2.16e-08,8;UBERON:0000454,2.16e-08,8;UBERON:0011216,3.71e-08,194;UBERON:0003076,7.10e-08,12;UBERON:0003057,7.10e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,1.03689612308478,0.540023753326763,1.68259969081106,0.571301968807607,1.54607978666129,0.734944795289724,1.24599112323707,0.919218786610021,1.10115880999389,0.893811366596314,1.68967186581868,2.63772575460388,2.56165402086747,2.08365348222704,1.11673199600552,0.56276261003168,0.763991238884051,3.24091444021034,1.99320353118744,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0.304465478312141,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0.748953197024114,0.457500602818626,1.88481528169297,2.78118912307642,3.3243009452943,1.0389402227978,2.43361894601636,0,0,0,0,0,0.689706313300419,0,0.150704817835715,0.408218994907967,0,0.187403449119458,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,1.02904612379284,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.456994050438915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,2.22702204525186,0,0,0.315508219416257,0.390438744296638,0.861693590931196,0,0,0.283076530788832,0,0.876767573733936,0.790575555893047,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0.428674070063185,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.14579102687879,2.57779773515531,0,4.5323633843382,1.35004500046361,2.70192721934532,1.35942722695261,2.07104124700728,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0,0.183843508450014,1.11123363900808,0.412070114477788,0,0.505394423527595,0.50695859978048,0,0.187283014939765,0.384150914429216,0.0574354689556133,0,0.579421629724277,0.578727661391115,0,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0.543216455383447,0,0.355905054372522,0.197008964751127,0,0.464810523557898,0,0.749431733813838,0.467863216890817,0,0,0,0 | |||
|short_description=p10@Phactr3 | |||
}} |
Revision as of 16:54, 4 August 2015
Short description: | p10@Phactr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Phactr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -45bp_to_ENSMUST00000103066, NM_028806, uc008ohk.2_5end |
EntrezGene: | 74189 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.79e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.79e-26 | 23 |
neuron | 2.30e-17 | 33 |
neuronal stem cell | 2.30e-17 | 33 |
neuroblast | 2.30e-17 | 33 |
electrically signaling cell | 2.30e-17 | 33 |
electrically responsive cell | 3.80e-14 | 39 |
electrically active cell | 3.80e-14 | 39 |
neural cell | 1.68e-12 | 43 |
ectodermal cell | 3.88e-12 | 44 |
neurectodermal cell | 3.88e-12 | 44 |
neuron of the ventral spinal cord | 1.84e-09 | 3 |
striatum neuron | 3.05e-09 | 3 |
granule cell | 1.12e-08 | 3 |