FFCP PHASE1:Mm9::chr9:107507594..107507614,-: Difference between revisions
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{{FFCP|EntrezGene=20347|HGNC=|UniProt=Q62177,Q0VGP2|association_with_transcript=118bp_to_ENSMUST00000102529,ENSMUST00000169715,NM_009153,uc009rmf.1_5end|description=CAGE_peak_4_at_Sema3b_5end|id=chr9:107507594..107507614,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,4.49e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.89e-12!43;UBERON:0005409!6.48e-11!59;UBERON:0000344!2.18e-09!15;UBERON:0001242!1.53e-08!13;UBERON:0000060!1.53e-08!13;UBERON:0001262!1.53e-08!13;UBERON:0004786!1.53e-08!13;UBERON:0000010!3.01e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.55e-26,31;UBERON:0005409,8.44e-25,47;UBERON:0004119,2.13e-12,118;UBERON:0000925,2.13e-12,118;UBERON:0006595,2.13e-12,118;UBERON:0000344,9.12e-12,15;UBERON:0001007,3.10e-11,116;UBERON:0001555,3.10e-11,116;UBERON:0007026,3.10e-11,116;UBERON:0004921,3.75e-10,114;UBERON:0001242,4.05e-10,13;UBERON:0001262,4.05e-10,13;UBERON:0004786,4.05e-10,13;UBERON:0000010,1.08e-09,11;UBERON:0011216,1.32e-08,194;UBERON:0004923,2.07e-08,24;UBERON:0002410,4.49e-07,9|phase1_expression=0.320297694209588,2.79180326111489,0.909998478779072,1.20985684522732,2.50447864973174,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.75991665072747,1.37645568640302,1.72269589234506,3.01533397311352,1.07735616342945,6.65081968097309,3.2763916868791,3.10422714917427,0,0,0,4.33277429626912,5.48574329683025,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,1.14260393761521,1.76694832761291,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.15279824777681,2.06240009831567,2.13557521198654,0.745597783301202,9.61722655331437,5.13886608726142,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,5.63373679106722,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0.251333182659351,0.741584903203122,0,0,0.161766849947409,0.441683036920787,0,11.1835056730873,0.585561594023094,0.209446706813455,2.81002760729451,0,0,0,0,0.457500602818626,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0.420883711772948,0,0.229902104433473,0.180062129805349,0.30140963567143,0.544291993210623,0.12811372028485,0.468508622798644,0.517406741478031,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.393528463494808,0.462801338662135,0.232533944750408,0.804820204198858,0.233530684734339,0.987359099480883,0.32833492815819,0.0810688095458557,0.438599962275997,0.219550115291051,0.134206418760372,0,0,4.95628174475697,2.3800550999719,0.213288250535234,0.232236671860439,2.31961430379768,2.62188582010345,3.7804267453628,2.47293313946327,2.37264530772256,1.81168850196412,3.01602250560323,2.58643413653496,2.14460495831032,2.69645822596266,2.37751854862164,2.58883655230677,0,0,1.1270773567308,0.407302655690628,0.193952487167626,0.420814919341911,1.01178459398812,1.47610147979602,1.41298855057237,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,2.03228509183265,0.37898282354097,0,0.169745085775188,0.469380496577004,0.670025029767263,1.19021820443007,1.36593553500459,1.41871629695572,1.7717175171902,3.02964060449226,1.63863314715738,1.20879487306127,1.15719246865209,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0.631016438832513,1.56175497718655,0.430846795465598,3.10659437338318,3.34198011123591,5.66153061577665,2.02405350837447,3.21481443702443,1.97643888973262,0,1.13552068166615,0.35613120733451,0.488660878060728,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,1.64270195644597,1.69465656691056,0.220528398054962,0.32977250588296,0,0.0603129249281559,0.238744688006273,0.164140899745061,2.33184669303881,0.741701208042039,0,0,0,0,0.27338845544205,0,0,0,0,0,0,0.406638934253697,1.08005340821801,1.25452977608681,1.9652630737156,1.88810084938749,1.40510874733071,2.87931536182433,3.24037433229482,0,0,0.149516546043979,0.165458490457098,0.777804753376191,0.904118764344118,0.337912250981556,0.352071715937262,0.39061315453185,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.15241361331,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.772758376128762,4.129014459926,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.50695859978048,0.754505365544305,0.187283014939765,0.320125762024346,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0.238436189947321,1.0174249164263,0.188218760830661,0.507687647350059,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.591026894253381,0,0.464810523557898,0.385813221962283,0.749431733813838,0.701794825336225,1.28922632428979,0.191288332068843,1.54413993383661,0.695603506861264|short_description=p4@Sema3b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20347 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q62177,uniprot:Q0VGP2 | |||
|association_with_transcript=118bp_to_ENSMUST00000102529,ENSMUST00000169715,NM_009153,uc009rmf.1_5end | |||
|cluster_id=chr9:107507594..107507614,- | |||
|description=CAGE_peak_4_at_Sema3b_5end | |||
|id=chr9:107507594..107507614,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.49e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.89e-12!43;UBERON:0005409!6.48e-11!59;UBERON:0000344!2.18e-09!15;UBERON:0001242!1.53e-08!13;UBERON:0000060!1.53e-08!13;UBERON:0001262!1.53e-08!13;UBERON:0004786!1.53e-08!13;UBERON:0000010!3.01e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.55e-26,31;UBERON:0005409,8.44e-25,47;UBERON:0004119,2.13e-12,118;UBERON:0000925,2.13e-12,118;UBERON:0006595,2.13e-12,118;UBERON:0000344,9.12e-12,15;UBERON:0001007,3.10e-11,116;UBERON:0001555,3.10e-11,116;UBERON:0007026,3.10e-11,116;UBERON:0004921,3.75e-10,114;UBERON:0001242,4.05e-10,13;UBERON:0001262,4.05e-10,13;UBERON:0004786,4.05e-10,13;UBERON:0000010,1.08e-09,11;UBERON:0011216,1.32e-08,194;UBERON:0004923,2.07e-08,24;UBERON:0002410,4.49e-07,9 | |||
|phase1_expression=0.320297694209588,2.79180326111489,0.909998478779072,1.20985684522732,2.50447864973174,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.75991665072747,1.37645568640302,1.72269589234506,3.01533397311352,1.07735616342945,6.65081968097309,3.2763916868791,3.10422714917427,0,0,0,4.33277429626912,5.48574329683025,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,1.14260393761521,1.76694832761291,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.15279824777681,2.06240009831567,2.13557521198654,0.745597783301202,9.61722655331437,5.13886608726142,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,5.63373679106722,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0.251333182659351,0.741584903203122,0,0,0.161766849947409,0.441683036920787,0,11.1835056730873,0.585561594023094,0.209446706813455,2.81002760729451,0,0,0,0,0.457500602818626,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0.420883711772948,0,0.229902104433473,0.180062129805349,0.30140963567143,0.544291993210623,0.12811372028485,0.468508622798644,0.517406741478031,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.393528463494808,0.462801338662135,0.232533944750408,0.804820204198858,0.233530684734339,0.987359099480883,0.32833492815819,0.0810688095458557,0.438599962275997,0.219550115291051,0.134206418760372,0,0,4.95628174475697,2.3800550999719,0.213288250535234,0.232236671860439,2.31961430379768,2.62188582010345,3.7804267453628,2.47293313946327,2.37264530772256,1.81168850196412,3.01602250560323,2.58643413653496,2.14460495831032,2.69645822596266,2.37751854862164,2.58883655230677,0,0,1.1270773567308,0.407302655690628,0.193952487167626,0.420814919341911,1.01178459398812,1.47610147979602,1.41298855057237,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,2.03228509183265,0.37898282354097,0,0.169745085775188,0.469380496577004,0.670025029767263,1.19021820443007,1.36593553500459,1.41871629695572,1.7717175171902,3.02964060449226,1.63863314715738,1.20879487306127,1.15719246865209,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0.631016438832513,1.56175497718655,0.430846795465598,3.10659437338318,3.34198011123591,5.66153061577665,2.02405350837447,3.21481443702443,1.97643888973262,0,1.13552068166615,0.35613120733451,0.488660878060728,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,1.64270195644597,1.69465656691056,0.220528398054962,0.32977250588296,0,0.0603129249281559,0.238744688006273,0.164140899745061,2.33184669303881,0.741701208042039,0,0,0,0,0.27338845544205,0,0,0,0,0,0,0.406638934253697,1.08005340821801,1.25452977608681,1.9652630737156,1.88810084938749,1.40510874733071,2.87931536182433,3.24037433229482,0,0,0.149516546043979,0.165458490457098,0.777804753376191,0.904118764344118,0.337912250981556,0.352071715937262,0.39061315453185,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.15241361331,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.772758376128762,4.129014459926,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.50695859978048,0.754505365544305,0.187283014939765,0.320125762024346,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0.238436189947321,1.0174249164263,0.188218760830661,0.507687647350059,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.591026894253381,0,0.464810523557898,0.385813221962283,0.749431733813838,0.701794825336225,1.28922632428979,0.191288332068843,1.54413993383661,0.695603506861264 | |||
|short_description=p4@Sema3b | |||
}} |
Revision as of 12:51, 4 August 2015
Short description: | p4@Sema3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sema3b_5end |
Coexpression cluster: | NA |
Association with transcript: | 118bp_to_ENSMUST00000102529, ENSMUST00000169715, NM_009153, uc009rmf.1_5end |
EntrezGene: | 20347 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.49e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.55e-26 | 31 |
gastrointestinal system | 8.44e-25 | 47 |
endoderm-derived structure | 2.13e-12 | 118 |
endoderm | 2.13e-12 | 118 |
presumptive endoderm | 2.13e-12 | 118 |
mucosa | 9.12e-12 | 15 |
digestive system | 3.10e-11 | 116 |
digestive tract | 3.10e-11 | 116 |
primitive gut | 3.10e-11 | 116 |
subdivision of digestive tract | 3.75e-10 | 114 |
intestinal mucosa | 4.05e-10 | 13 |
wall of intestine | 4.05e-10 | 13 |
gastrointestinal system mucosa | 4.05e-10 | 13 |
peripheral nervous system | 1.08e-09 | 11 |
organ system subdivision | 1.32e-08 | 194 |
organ component layer | 2.07e-08 | 24 |
autonomic nervous system | 4.49e-07 | 9 |