FFCP PHASE1:Mm9::chr2:164349163..164349184,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=217|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:164349163..164349184,+|id=chr2:164349163..164349184,+|ontology_enrichment_celltype=CL:0002563!4.20e-07!9;CL:0002251!4.20e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,3.01e-09,9;CL:0002251,3.01e-09,9;CL:0002250,7.16e-08,3;CL:0002076,6.40e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.22e-14!128;UBERON:0001555!1.22e-14!128;UBERON:0007026!1.22e-14!128;UBERON:0004119!1.59e-14!130;UBERON:0000925!1.59e-14!130;UBERON:0006595!1.59e-14!130;UBERON:0005409!5.44e-14!59;UBERON:0004921!8.85e-14!126;UBERON:0004185!8.85e-14!126;UBERON:0000160!5.10e-13!43;UBERON:0000344!2.25e-08!15;UBERON:0001242!1.67e-07!13;UBERON:0000060!1.67e-07!13;UBERON:0001262!1.67e-07!13;UBERON:0004786!1.67e-07!13;UBERON:0003350!4.20e-07!9;UBERON:0004808!4.20e-07!9;UBERON:0001277!4.20e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.90e-18,31;UBERON:0005409,1.87e-12,47;UBERON:0003350,3.01e-09,9;UBERON:0004808,3.01e-09,9;UBERON:0001277,3.01e-09,9;UBERON:0001242,1.45e-08,13;UBERON:0001262,1.45e-08,13;UBERON:0004786,1.45e-08,13;UBERON:0004921,2.18e-08,114;UBERON:0000014,2.40e-08,5;UBERON:0001003,2.40e-08,5;UBERON:0002097,2.40e-08,5;UBERON:0002199,2.40e-08,5;UBERON:0007029,2.40e-08,5;UBERON:0007376,2.40e-08,5;UBERON:0002416,2.40e-08,5;UBERON:0007383,2.40e-08,5;UBERON:0001007,3.81e-08,116;UBERON:0001555,3.81e-08,116;UBERON:0007026,3.81e-08,116;UBERON:0000162,5.13e-08,3;UBERON:0001353,5.13e-08,3;UBERON:0000163,5.13e-08,3;UBERON:0006866,5.13e-08,3;UBERON:0001046,5.13e-08,3;UBERON:0000164,5.13e-08,3;UBERON:0000931,5.13e-08,3;UBERON:0000161,6.01e-08,5;UBERON:0004119,6.51e-08,118;UBERON:0000925,6.51e-08,118;UBERON:0006595,6.51e-08,118;UBERON:0000485,1.91e-07,11;UBERON:0000344,2.74e-07,15|phase1_expression=0.160148847104794,1.04692622291808,0.909998478779072,3.0246421130683,3.00537437967808,0.503637815735669,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,0,0,0,0.639969691173627,0.45881856213434,0,1.29228598847722,1.07735616342945,0.380046838912748,0,0.443461021310609,0,0,0,1.44425809875637,2.1610503896604,1.63335485009895,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,1.01104889002957,0.45673551887624,0.258937883647172,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0.484875253135222,0,0,0.41889341362691,3.32094171771169,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0,0,14.5384264512871,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.570676878337677,5.69434873853414,0.329397909448022,3.51869292320377,3.78017296878187,2.72949721966768,4.49409704327111,4.32276099749388,4.38110801159608,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.739012760666419,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.780534591431195,0.315270288212382,0.664394068946325,0.159454768657487,0.491589944147214,1.03610989119537,1.3018415272336,0,0,0.491764273019036,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0.565815239267694,0.295301892880773,1.53717573971964,0.516856586336442,0.363533729477506,0,0.948110273807448,0,0,1.02131881726136,0,0,0.428674070063185,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,3.74898276693435,3.2977250588296,0.807322133479528,1.99032652262914,1.3130957840345,3.93938159388147,4.37221254944776,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.944050424693745,0.495920734352016,0.785267825952089,6.48074866458964,1.24267862617385,0,0,0,1.94451188344048,1.03327858782185,0.675824501963113,0.234714477291508,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0,0.38983152295901,0,0,0.453460767230423,0.221985953374065,0,0.503653849092235,2.70465431645067,0,0,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0.384150914429216,0.402048282689293,0,0.115884325944855,0.192909220463705,0.824171801606613,0.588795680537589,0.342869252385415,0,0.238436189947321,0.290692833264657,0,0.25384382367503,0,1.05227884575137,0.271608227691724,0,0.593175090620871,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0|short_description=p@chr2:164349163..164349184,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=217 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:164349163..164349184,+ | |||
|description=CAGE_peak_at_chr2:164349163..164349184,+ | |||
|id=chr2:164349163..164349184,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.20e-07!9;CL:0002251!4.20e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.01e-09,9;CL:0002251,3.01e-09,9;CL:0002250,7.16e-08,3;CL:0002076,6.40e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.22e-14!128;UBERON:0001555!1.22e-14!128;UBERON:0007026!1.22e-14!128;UBERON:0004119!1.59e-14!130;UBERON:0000925!1.59e-14!130;UBERON:0006595!1.59e-14!130;UBERON:0005409!5.44e-14!59;UBERON:0004921!8.85e-14!126;UBERON:0004185!8.85e-14!126;UBERON:0000160!5.10e-13!43;UBERON:0000344!2.25e-08!15;UBERON:0001242!1.67e-07!13;UBERON:0000060!1.67e-07!13;UBERON:0001262!1.67e-07!13;UBERON:0004786!1.67e-07!13;UBERON:0003350!4.20e-07!9;UBERON:0004808!4.20e-07!9;UBERON:0001277!4.20e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.90e-18,31;UBERON:0005409,1.87e-12,47;UBERON:0003350,3.01e-09,9;UBERON:0004808,3.01e-09,9;UBERON:0001277,3.01e-09,9;UBERON:0001242,1.45e-08,13;UBERON:0001262,1.45e-08,13;UBERON:0004786,1.45e-08,13;UBERON:0004921,2.18e-08,114;UBERON:0000014,2.40e-08,5;UBERON:0001003,2.40e-08,5;UBERON:0002097,2.40e-08,5;UBERON:0002199,2.40e-08,5;UBERON:0007029,2.40e-08,5;UBERON:0007376,2.40e-08,5;UBERON:0002416,2.40e-08,5;UBERON:0007383,2.40e-08,5;UBERON:0001007,3.81e-08,116;UBERON:0001555,3.81e-08,116;UBERON:0007026,3.81e-08,116;UBERON:0000162,5.13e-08,3;UBERON:0001353,5.13e-08,3;UBERON:0000163,5.13e-08,3;UBERON:0006866,5.13e-08,3;UBERON:0001046,5.13e-08,3;UBERON:0000164,5.13e-08,3;UBERON:0000931,5.13e-08,3;UBERON:0000161,6.01e-08,5;UBERON:0004119,6.51e-08,118;UBERON:0000925,6.51e-08,118;UBERON:0006595,6.51e-08,118;UBERON:0000485,1.91e-07,11;UBERON:0000344,2.74e-07,15 | |||
|phase1_expression=0.160148847104794,1.04692622291808,0.909998478779072,3.0246421130683,3.00537437967808,0.503637815735669,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,0,0,0,0.639969691173627,0.45881856213434,0,1.29228598847722,1.07735616342945,0.380046838912748,0,0.443461021310609,0,0,0,1.44425809875637,2.1610503896604,1.63335485009895,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,1.01104889002957,0.45673551887624,0.258937883647172,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0.484875253135222,0,0,0.41889341362691,3.32094171771169,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0,0,14.5384264512871,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.570676878337677,5.69434873853414,0.329397909448022,3.51869292320377,3.78017296878187,2.72949721966768,4.49409704327111,4.32276099749388,4.38110801159608,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.739012760666419,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.780534591431195,0.315270288212382,0.664394068946325,0.159454768657487,0.491589944147214,1.03610989119537,1.3018415272336,0,0,0.491764273019036,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0.565815239267694,0.295301892880773,1.53717573971964,0.516856586336442,0.363533729477506,0,0.948110273807448,0,0,1.02131881726136,0,0,0.428674070063185,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,3.74898276693435,3.2977250588296,0.807322133479528,1.99032652262914,1.3130957840345,3.93938159388147,4.37221254944776,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.944050424693745,0.495920734352016,0.785267825952089,6.48074866458964,1.24267862617385,0,0,0,1.94451188344048,1.03327858782185,0.675824501963113,0.234714477291508,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0,0.38983152295901,0,0,0.453460767230423,0.221985953374065,0,0.503653849092235,2.70465431645067,0,0,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0.384150914429216,0.402048282689293,0,0.115884325944855,0.192909220463705,0.824171801606613,0.588795680537589,0.342869252385415,0,0.238436189947321,0.290692833264657,0,0.25384382367503,0,1.05227884575137,0.271608227691724,0,0.593175090620871,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr2:164349163..164349184,+ | |||
}} |
Latest revision as of 12:38, 4 August 2015
Short description: | p@chr2:164349163..164349184, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:164349163..164349184, + |
Coexpression cluster: | MCL_coexpression_mm9:217 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.01e-09 | 9 |
epithelial cell of alimentary canal | 3.01e-09 | 9 |
intestinal crypt stem cell | 7.16e-08 | 3 |
endo-epithelial cell | 6.40e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.90e-18 | 31 |
gastrointestinal system | 1.87e-12 | 47 |
epithelium of mucosa | 3.01e-09 | 9 |
gastrointestinal system epithelium | 3.01e-09 | 9 |
intestinal epithelium | 3.01e-09 | 9 |
intestinal mucosa | 1.45e-08 | 13 |
wall of intestine | 1.45e-08 | 13 |
gastrointestinal system mucosa | 1.45e-08 | 13 |
subdivision of digestive tract | 2.18e-08 | 114 |
zone of skin | 2.40e-08 | 5 |
skin epidermis | 2.40e-08 | 5 |
skin of body | 2.40e-08 | 5 |
integument | 2.40e-08 | 5 |
surface | 2.40e-08 | 5 |
outer epithelium | 2.40e-08 | 5 |
integumental system | 2.40e-08 | 5 |
enveloping layer of ectoderm | 2.40e-08 | 5 |
digestive system | 3.81e-08 | 116 |
digestive tract | 3.81e-08 | 116 |
primitive gut | 3.81e-08 | 116 |
cloaca | 5.13e-08 | 3 |
anal region | 5.13e-08 | 3 |
embryonic cloaca | 5.13e-08 | 3 |
terminal part of digestive tract | 5.13e-08 | 3 |
hindgut | 5.13e-08 | 3 |
primitive urogenital sinus | 5.13e-08 | 3 |
proctodeum | 5.13e-08 | 3 |
orifice | 6.01e-08 | 5 |
endoderm-derived structure | 6.51e-08 | 118 |
endoderm | 6.51e-08 | 118 |
presumptive endoderm | 6.51e-08 | 118 |
simple columnar epithelium | 1.91e-07 | 11 |
mucosa | 2.74e-07 | 15 |