FFCP PHASE1:Mm9::chr11:97213662..97213677,-: Difference between revisions
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{{FFCP|EntrezGene=217143|HGNC=|MCL_coexpression_id=248|UniProt=|association_with_transcript=-271bp_to_ENSMUST00000162544_5end|description=CAGE_peak_1_at_Gpr179_5end|id=chr11:97213662..97213677,-|ontology_enrichment_celltype=CL:0002453!8.93e-08!8;CL:0002319!3.46e-07!43;CL:0000221!6.73e-07!44;CL:0000133!6.73e-07!44|ontology_enrichment_celltype_v019_2=CL:0000878,9.73e-09,2;CL:0000129,9.73e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.51e-28!71;UBERON:0003075!9.51e-28!71;UBERON:0007284!9.51e-28!71;UBERON:0004121!1.54e-25!102;UBERON:0000924!1.54e-25!102;UBERON:0006601!1.54e-25!102;UBERON:0001017!2.42e-18!73;UBERON:0005743!2.42e-18!73;UBERON:0000073!1.62e-17!75;UBERON:0001016!1.62e-17!75;UBERON:0000033!6.80e-16!63;UBERON:0001049!6.79e-15!52;UBERON:0005068!6.79e-15!52;UBERON:0006241!6.79e-15!52;UBERON:0007135!6.79e-15!52;UBERON:0003056!1.98e-14!49;UBERON:0000955!3.17e-12!50;UBERON:0006238!3.17e-12!50;UBERON:0001894!4.83e-12!10;UBERON:0006222!4.83e-12!10;UBERON:0002616!1.81e-11!49;UBERON:0000007!4.12e-10!8;UBERON:0003296!4.12e-10!8;UBERON:0010133!4.12e-10!8;UBERON:0002369!3.04e-09!7;UBERON:0006858!3.04e-09!7;UBERON:0003080!3.23e-09!40;UBERON:0007811!7.30e-09!86;UBERON:0002780!2.12e-08!39;UBERON:0001890!2.12e-08!39;UBERON:0006240!2.12e-08!39;UBERON:0002298!2.95e-08!6;UBERON:0002342!9.07e-08!10;UBERON:0005062!9.07e-08!10;UBERON:0000153!2.70e-07!94;UBERON:0000970!3.49e-07!9;UBERON:0000019!3.49e-07!9;UBERON:0000047!3.49e-07!9;UBERON:0004088!3.49e-07!9;UBERON:0002104!3.49e-07!9;UBERON:0001456!3.49e-07!9;UBERON:0003072!3.49e-07!9;UBERON:0003071!3.49e-07!9;UBERON:0004128!3.49e-07!9;UBERON:0003076!3.57e-07!12;UBERON:0003057!3.57e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001894,8.17e-14,10;UBERON:0006222,8.17e-14,10;UBERON:0002369,4.47e-13,7;UBERON:0006858,4.47e-13,7;UBERON:0000007,1.23e-12,8;UBERON:0003296,1.23e-12,8;UBERON:0010133,1.23e-12,8;UBERON:0010314,1.89e-11,92;UBERON:0001017,2.06e-10,73;UBERON:0001016,4.70e-10,75;UBERON:0004121,1.02e-09,95;UBERON:0000924,1.02e-09,95;UBERON:0006601,1.02e-09,95;UBERON:0002346,4.46e-09,64;UBERON:0003075,4.46e-09,64;UBERON:0007284,4.46e-09,64;UBERON:0002950,1.00e-08,4;UBERON:0001891,1.00e-08,4;UBERON:0009616,1.00e-08,4;UBERON:0010286,1.00e-08,4;UBERON:0001049,2.06e-08,52;UBERON:0005068,2.06e-08,52;UBERON:0006241,2.06e-08,52;UBERON:0007135,2.06e-08,52;UBERON:0001896,2.73e-08,2;UBERON:0002298,2.73e-08,2;UBERON:0005290,2.73e-08,2;UBERON:0010096,2.73e-08,2;UBERON:0002616,3.95e-08,46;UBERON:0000955,6.45e-08,47;UBERON:0006238,6.45e-08,47;UBERON:0010371,1.23e-07,73;UBERON:0003056,1.49e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0,0.58328969722285,0.419959264876088,2.87505128729943,0,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,1.79760066311043,3.45796474789399,0,0,0,0,0.441737081903227,0,0,0,0,0.383062014255563,0,0.395658863190582,0.182975287204819,0,1.3959149950069,0.56276261003168,1.06958773443767,0.589257170947335,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,1.21439728736295,1.21786191324856,2.30615497256059,2.71300752994721,1.76383060703557,0.502666365318702,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,0.457500602818626,0.251308704225729,0,0.511430914660661,1.0389402227978,0.486723789203273,0.101839363850316,0,0,1.26265113531884,0,0.229902104433473,0.180062129805349,0.150704817835715,0.748401490664606,0.768682321709099,0.374806898238915,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.52375192569864,0,0,0,0,0.646270193198397,0,0,0,0,0.292255857911312,0.395287777946524,0.642642632843614,0,0,0,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0.727067458955011,0.356497378384721,0,0,1.03135543248187,9.53230896110606,0.18006109403131,0.646793418913773,0.214337035031592,2.6601035046341,6.0645397984704,7.89835298890181,5.48036908406279,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0.354951612318675,0.238436189947321,0,0,0.169229215783353,0,0,0,0,0,0,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p1@Gpr179}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:217143 | |||
|HGNC= | |||
|MCL_coexpression_id=248 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-271bp_to_ENSMUST00000162544_5end | |||
|cluster_id=chr11:97213662..97213677,- | |||
|description=CAGE_peak_1_at_Gpr179_5end | |||
|id=chr11:97213662..97213677,- | |||
|ontology_enrichment_celltype=CL:0002453!8.93e-08!8;CL:0002319!3.46e-07!43;CL:0000221!6.73e-07!44;CL:0000133!6.73e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,9.73e-09,2;CL:0000129,9.73e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.51e-28!71;UBERON:0003075!9.51e-28!71;UBERON:0007284!9.51e-28!71;UBERON:0004121!1.54e-25!102;UBERON:0000924!1.54e-25!102;UBERON:0006601!1.54e-25!102;UBERON:0001017!2.42e-18!73;UBERON:0005743!2.42e-18!73;UBERON:0000073!1.62e-17!75;UBERON:0001016!1.62e-17!75;UBERON:0000033!6.80e-16!63;UBERON:0001049!6.79e-15!52;UBERON:0005068!6.79e-15!52;UBERON:0006241!6.79e-15!52;UBERON:0007135!6.79e-15!52;UBERON:0003056!1.98e-14!49;UBERON:0000955!3.17e-12!50;UBERON:0006238!3.17e-12!50;UBERON:0001894!4.83e-12!10;UBERON:0006222!4.83e-12!10;UBERON:0002616!1.81e-11!49;UBERON:0000007!4.12e-10!8;UBERON:0003296!4.12e-10!8;UBERON:0010133!4.12e-10!8;UBERON:0002369!3.04e-09!7;UBERON:0006858!3.04e-09!7;UBERON:0003080!3.23e-09!40;UBERON:0007811!7.30e-09!86;UBERON:0002780!2.12e-08!39;UBERON:0001890!2.12e-08!39;UBERON:0006240!2.12e-08!39;UBERON:0002298!2.95e-08!6;UBERON:0002342!9.07e-08!10;UBERON:0005062!9.07e-08!10;UBERON:0000153!2.70e-07!94;UBERON:0000970!3.49e-07!9;UBERON:0000019!3.49e-07!9;UBERON:0000047!3.49e-07!9;UBERON:0004088!3.49e-07!9;UBERON:0002104!3.49e-07!9;UBERON:0001456!3.49e-07!9;UBERON:0003072!3.49e-07!9;UBERON:0003071!3.49e-07!9;UBERON:0004128!3.49e-07!9;UBERON:0003076!3.57e-07!12;UBERON:0003057!3.57e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,8.17e-14,10;UBERON:0006222,8.17e-14,10;UBERON:0002369,4.47e-13,7;UBERON:0006858,4.47e-13,7;UBERON:0000007,1.23e-12,8;UBERON:0003296,1.23e-12,8;UBERON:0010133,1.23e-12,8;UBERON:0010314,1.89e-11,92;UBERON:0001017,2.06e-10,73;UBERON:0001016,4.70e-10,75;UBERON:0004121,1.02e-09,95;UBERON:0000924,1.02e-09,95;UBERON:0006601,1.02e-09,95;UBERON:0002346,4.46e-09,64;UBERON:0003075,4.46e-09,64;UBERON:0007284,4.46e-09,64;UBERON:0002950,1.00e-08,4;UBERON:0001891,1.00e-08,4;UBERON:0009616,1.00e-08,4;UBERON:0010286,1.00e-08,4;UBERON:0001049,2.06e-08,52;UBERON:0005068,2.06e-08,52;UBERON:0006241,2.06e-08,52;UBERON:0007135,2.06e-08,52;UBERON:0001896,2.73e-08,2;UBERON:0002298,2.73e-08,2;UBERON:0005290,2.73e-08,2;UBERON:0010096,2.73e-08,2;UBERON:0002616,3.95e-08,46;UBERON:0000955,6.45e-08,47;UBERON:0006238,6.45e-08,47;UBERON:0010371,1.23e-07,73;UBERON:0003056,1.49e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0,0.58328969722285,0.419959264876088,2.87505128729943,0,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,1.79760066311043,3.45796474789399,0,0,0,0,0.441737081903227,0,0,0,0,0.383062014255563,0,0.395658863190582,0.182975287204819,0,1.3959149950069,0.56276261003168,1.06958773443767,0.589257170947335,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,1.21439728736295,1.21786191324856,2.30615497256059,2.71300752994721,1.76383060703557,0.502666365318702,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,0.457500602818626,0.251308704225729,0,0.511430914660661,1.0389402227978,0.486723789203273,0.101839363850316,0,0,1.26265113531884,0,0.229902104433473,0.180062129805349,0.150704817835715,0.748401490664606,0.768682321709099,0.374806898238915,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.52375192569864,0,0,0,0,0.646270193198397,0,0,0,0,0.292255857911312,0.395287777946524,0.642642632843614,0,0,0,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0.727067458955011,0.356497378384721,0,0,1.03135543248187,9.53230896110606,0.18006109403131,0.646793418913773,0.214337035031592,2.6601035046341,6.0645397984704,7.89835298890181,5.48036908406279,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0.354951612318675,0.238436189947321,0,0,0.169229215783353,0,0,0,0,0,0,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p1@Gpr179 | |||
}} |
Revision as of 11:21, 4 August 2015
Short description: | p1@Gpr179 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr179_5end |
Coexpression cluster: | MCL_coexpression_mm9:248 |
Association with transcript: | -271bp_to_ENSMUST00000162544_5end |
EntrezGene: | 217143 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 9.73e-09 | 2 |
microglial cell | 9.73e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
diencephalon | 8.17e-14 | 10 |
future diencephalon | 8.17e-14 | 10 |
adrenal gland | 4.47e-13 | 7 |
adrenal/interrenal gland | 4.47e-13 | 7 |
pituitary gland | 1.23e-12 | 8 |
gland of diencephalon | 1.23e-12 | 8 |
neuroendocrine gland | 1.23e-12 | 8 |
structure with developmental contribution from neural crest | 1.89e-11 | 92 |
central nervous system | 2.06e-10 | 73 |
nervous system | 4.70e-10 | 75 |
ectoderm-derived structure | 1.02e-09 | 95 |
ectoderm | 1.02e-09 | 95 |
presumptive ectoderm | 1.02e-09 | 95 |
neurectoderm | 4.46e-09 | 64 |
neural plate | 4.46e-09 | 64 |
presumptive neural plate | 4.46e-09 | 64 |
regional part of midbrain | 1.00e-08 | 4 |
midbrain | 1.00e-08 | 4 |
presumptive midbrain | 1.00e-08 | 4 |
midbrain neural tube | 1.00e-08 | 4 |
neural tube | 2.06e-08 | 52 |
neural rod | 2.06e-08 | 52 |
future spinal cord | 2.06e-08 | 52 |
neural keel | 2.06e-08 | 52 |
medulla oblongata | 2.73e-08 | 2 |
brainstem | 2.73e-08 | 2 |
myelencephalon | 2.73e-08 | 2 |
future myelencephalon | 2.73e-08 | 2 |
regional part of brain | 3.95e-08 | 46 |
brain | 6.45e-08 | 47 |
future brain | 6.45e-08 | 47 |
ecto-epithelium | 1.23e-07 | 73 |
pre-chordal neural plate | 1.49e-07 | 49 |