FFCP PHASE1:Mm9::chr10:21602020..21602045,+: Difference between revisions
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{{FFCP|EntrezGene=20393|HGNC=|MCL_coexpression_id=2546|UniProt=Q9WVC6|association_with_transcript=30bp_to_ENSMUST00000120509,NM_001161845,uc007eou.1,uc007eov.2_5end|description=CAGE_peak_8_at_Sgk1_5end|id=chr10:21602020..21602045,+|ontology_enrichment_celltype=CL:0000117!9.63e-15!23;CL:0000337!9.63e-15!23;CL:0000540!4.51e-08!33;CL:0000047!4.51e-08!33;CL:0000031!4.51e-08!33;CL:0000404!4.51e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.07e-21,23;CL:0000337,9.07e-21,23;CL:0000540,7.78e-13,33;CL:0000047,7.78e-13,33;CL:0000031,7.78e-13,33;CL:0000404,7.78e-13,33;CL:0000393,4.56e-10,39;CL:0000211,4.56e-10,39;CL:0002319,1.14e-08,43;CL:0000221,2.32e-08,44;CL:0000133,2.32e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.02e-25!52;UBERON:0005068!2.02e-25!52;UBERON:0006241!2.02e-25!52;UBERON:0007135!2.02e-25!52;UBERON:0000033!7.91e-25!63;UBERON:0002346!2.85e-24!71;UBERON:0003075!2.85e-24!71;UBERON:0007284!2.85e-24!71;UBERON:0000955!2.59e-23!50;UBERON:0006238!2.59e-23!50;UBERON:0001017!3.52e-23!73;UBERON:0005743!3.52e-23!73;UBERON:0003056!4.09e-23!49;UBERON:0002616!1.36e-22!49;UBERON:0000073!1.44e-22!75;UBERON:0001016!1.44e-22!75;UBERON:0004121!3.00e-22!102;UBERON:0000924!3.00e-22!102;UBERON:0006601!3.00e-22!102;UBERON:0002020!1.35e-20!34;UBERON:0003080!1.45e-19!40;UBERON:0002780!1.06e-18!39;UBERON:0001890!1.06e-18!39;UBERON:0006240!1.06e-18!39;UBERON:0002791!9.94e-17!29;UBERON:0003528!9.94e-17!29;UBERON:0001893!9.94e-17!29;UBERON:0000153!7.44e-16!94;UBERON:0007811!1.73e-14!86;UBERON:0000956!6.70e-11!21;UBERON:0001869!6.70e-11!21;UBERON:0000203!6.70e-11!21;UBERON:0002619!4.62e-10!17;UBERON:0002021!7.85e-09!10;UBERON:0000411!7.85e-09!10;UBERON:0001950!7.85e-09!10;UBERON:0002420!3.02e-07!8;UBERON:0007245!3.02e-07!8;UBERON:0010009!3.02e-07!8;UBERON:0010011!3.02e-07!8;UBERON:0000454!3.02e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.73e-35,54;UBERON:0001049,7.24e-33,52;UBERON:0005068,7.24e-33,52;UBERON:0006241,7.24e-33,52;UBERON:0007135,7.24e-33,52;UBERON:0001017,5.12e-32,73;UBERON:0002020,3.88e-31,34;UBERON:0001016,7.59e-31,75;UBERON:0002346,7.78e-28,64;UBERON:0003075,7.78e-28,64;UBERON:0007284,7.78e-28,64;UBERON:0000955,4.68e-26,47;UBERON:0006238,4.68e-26,47;UBERON:0002616,7.38e-25,46;UBERON:0004121,2.39e-24,95;UBERON:0000924,2.39e-24,95;UBERON:0006601,2.39e-24,95;UBERON:0003528,4.64e-24,29;UBERON:0002791,4.64e-24,29;UBERON:0001893,4.64e-24,29;UBERON:0010371,4.46e-23,73;UBERON:0003080,1.73e-21,40;UBERON:0002780,4.26e-20,39;UBERON:0001890,4.26e-20,39;UBERON:0006240,4.26e-20,39;UBERON:0003056,6.46e-19,49;UBERON:0010314,4.00e-16,92;UBERON:0002021,1.94e-15,10;UBERON:0000411,1.94e-15,10;UBERON:0001950,1.94e-15,10;UBERON:0002619,4.18e-15,17;UBERON:0000956,1.22e-13,21;UBERON:0001869,1.22e-13,21;UBERON:0000203,1.22e-13,21;UBERON:0002420,2.02e-12,8;UBERON:0007245,2.02e-12,8;UBERON:0010009,2.02e-12,8;UBERON:0010011,2.02e-12,8;UBERON:0000454,2.02e-12,8;UBERON:0003076,5.64e-12,12;UBERON:0003057,5.64e-12,12;UBERON:0002240,9.26e-10,6;UBERON:0005174,9.26e-10,6;UBERON:0001137,9.26e-10,6;UBERON:0000025,1.57e-09,114;UBERON:0000369,8.54e-09,5;UBERON:0002435,8.54e-09,5;UBERON:0000204,8.54e-09,5;UBERON:0010082,8.54e-09,5;UBERON:0001948,1.77e-08,5;UBERON:0002315,1.77e-08,5;UBERON:0004111,2.71e-08,122;UBERON:0002950,8.25e-07,4;UBERON:0001891,8.25e-07,4;UBERON:0009616,8.25e-07,4;UBERON:0010286,8.25e-07,4|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36609096991689,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,5.05791152148994,4.23192783417626,10.775133859605,0,0,0,0,0,0.599200221036809,0.768436610643109,0.103689612308478,0.405017814995072,0.210324961351382,4.28476476605705,2.87129103237098,1.34739879136449,1.15014565221884,0.919218786610021,1.10115880999389,2.17068474744819,2.91852413186863,3.82470234417562,4.11694396210843,6.25096044668112,2.51264699101243,3.37657566019008,2.90316670775939,3.24091444021034,3.55929201997757,7.45597783301202,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.452167921657868,0,0,0,0,0,0,0,0,0,4.09893115816166,2.51336048176146,0,0,0,0,6.74057877321702,21.5025283324754,2.63874139437015,5.21472960576829,2.81287003063364,5.194701113989,8.92326946872667,0,0,0,0.631325567659422,0.910843100738926,0.459804208866946,0.360124259610698,0.452114453507145,0.884474488967262,1.15302348256365,0.843315521037559,2.06962696591213,1.07783996466421,2.83659120251729,2.28736461413134,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0.402619256281115,1.47202963994889,1.64647379806855,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20393 | |||
|HGNC= | |||
|MCL_coexpression_id=2546 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9WVC6 | |||
|association_with_transcript=30bp_to_ENSMUST00000120509,NM_001161845,uc007eou.1,uc007eov.2_5end | |||
|cluster_id=chr10:21602020..21602045,+ | |||
|description=CAGE_peak_8_at_Sgk1_5end | |||
|id=chr10:21602020..21602045,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.63e-15!23;CL:0000337!9.63e-15!23;CL:0000540!4.51e-08!33;CL:0000047!4.51e-08!33;CL:0000031!4.51e-08!33;CL:0000404!4.51e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.07e-21,23;CL:0000337,9.07e-21,23;CL:0000540,7.78e-13,33;CL:0000047,7.78e-13,33;CL:0000031,7.78e-13,33;CL:0000404,7.78e-13,33;CL:0000393,4.56e-10,39;CL:0000211,4.56e-10,39;CL:0002319,1.14e-08,43;CL:0000221,2.32e-08,44;CL:0000133,2.32e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.02e-25!52;UBERON:0005068!2.02e-25!52;UBERON:0006241!2.02e-25!52;UBERON:0007135!2.02e-25!52;UBERON:0000033!7.91e-25!63;UBERON:0002346!2.85e-24!71;UBERON:0003075!2.85e-24!71;UBERON:0007284!2.85e-24!71;UBERON:0000955!2.59e-23!50;UBERON:0006238!2.59e-23!50;UBERON:0001017!3.52e-23!73;UBERON:0005743!3.52e-23!73;UBERON:0003056!4.09e-23!49;UBERON:0002616!1.36e-22!49;UBERON:0000073!1.44e-22!75;UBERON:0001016!1.44e-22!75;UBERON:0004121!3.00e-22!102;UBERON:0000924!3.00e-22!102;UBERON:0006601!3.00e-22!102;UBERON:0002020!1.35e-20!34;UBERON:0003080!1.45e-19!40;UBERON:0002780!1.06e-18!39;UBERON:0001890!1.06e-18!39;UBERON:0006240!1.06e-18!39;UBERON:0002791!9.94e-17!29;UBERON:0003528!9.94e-17!29;UBERON:0001893!9.94e-17!29;UBERON:0000153!7.44e-16!94;UBERON:0007811!1.73e-14!86;UBERON:0000956!6.70e-11!21;UBERON:0001869!6.70e-11!21;UBERON:0000203!6.70e-11!21;UBERON:0002619!4.62e-10!17;UBERON:0002021!7.85e-09!10;UBERON:0000411!7.85e-09!10;UBERON:0001950!7.85e-09!10;UBERON:0002420!3.02e-07!8;UBERON:0007245!3.02e-07!8;UBERON:0010009!3.02e-07!8;UBERON:0010011!3.02e-07!8;UBERON:0000454!3.02e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.73e-35,54;UBERON:0001049,7.24e-33,52;UBERON:0005068,7.24e-33,52;UBERON:0006241,7.24e-33,52;UBERON:0007135,7.24e-33,52;UBERON:0001017,5.12e-32,73;UBERON:0002020,3.88e-31,34;UBERON:0001016,7.59e-31,75;UBERON:0002346,7.78e-28,64;UBERON:0003075,7.78e-28,64;UBERON:0007284,7.78e-28,64;UBERON:0000955,4.68e-26,47;UBERON:0006238,4.68e-26,47;UBERON:0002616,7.38e-25,46;UBERON:0004121,2.39e-24,95;UBERON:0000924,2.39e-24,95;UBERON:0006601,2.39e-24,95;UBERON:0003528,4.64e-24,29;UBERON:0002791,4.64e-24,29;UBERON:0001893,4.64e-24,29;UBERON:0010371,4.46e-23,73;UBERON:0003080,1.73e-21,40;UBERON:0002780,4.26e-20,39;UBERON:0001890,4.26e-20,39;UBERON:0006240,4.26e-20,39;UBERON:0003056,6.46e-19,49;UBERON:0010314,4.00e-16,92;UBERON:0002021,1.94e-15,10;UBERON:0000411,1.94e-15,10;UBERON:0001950,1.94e-15,10;UBERON:0002619,4.18e-15,17;UBERON:0000956,1.22e-13,21;UBERON:0001869,1.22e-13,21;UBERON:0000203,1.22e-13,21;UBERON:0002420,2.02e-12,8;UBERON:0007245,2.02e-12,8;UBERON:0010009,2.02e-12,8;UBERON:0010011,2.02e-12,8;UBERON:0000454,2.02e-12,8;UBERON:0003076,5.64e-12,12;UBERON:0003057,5.64e-12,12;UBERON:0002240,9.26e-10,6;UBERON:0005174,9.26e-10,6;UBERON:0001137,9.26e-10,6;UBERON:0000025,1.57e-09,114;UBERON:0000369,8.54e-09,5;UBERON:0002435,8.54e-09,5;UBERON:0000204,8.54e-09,5;UBERON:0010082,8.54e-09,5;UBERON:0001948,1.77e-08,5;UBERON:0002315,1.77e-08,5;UBERON:0004111,2.71e-08,122;UBERON:0002950,8.25e-07,4;UBERON:0001891,8.25e-07,4;UBERON:0009616,8.25e-07,4;UBERON:0010286,8.25e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36609096991689,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,5.05791152148994,4.23192783417626,10.775133859605,0,0,0,0,0,0.599200221036809,0.768436610643109,0.103689612308478,0.405017814995072,0.210324961351382,4.28476476605705,2.87129103237098,1.34739879136449,1.15014565221884,0.919218786610021,1.10115880999389,2.17068474744819,2.91852413186863,3.82470234417562,4.11694396210843,6.25096044668112,2.51264699101243,3.37657566019008,2.90316670775939,3.24091444021034,3.55929201997757,7.45597783301202,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.452167921657868,0,0,0,0,0,0,0,0,0,4.09893115816166,2.51336048176146,0,0,0,0,6.74057877321702,21.5025283324754,2.63874139437015,5.21472960576829,2.81287003063364,5.194701113989,8.92326946872667,0,0,0,0.631325567659422,0.910843100738926,0.459804208866946,0.360124259610698,0.452114453507145,0.884474488967262,1.15302348256365,0.843315521037559,2.06962696591213,1.07783996466421,2.83659120251729,2.28736461413134,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0.402619256281115,1.47202963994889,1.64647379806855,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,2.88991061978026,3.6335622843583,2.29508923527346,0,0,0,0.215423397732799,0,0,0,0,0,0,2.89189184779626,0.283880170416537,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0,0.322928853391811,0.361877549568935,0.477489376012546,0.328281799490123,0.291480836629851,3.33765543618917,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.201652370273681,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0,0,0,3.95326289831947,2.30162618253588,4.01026859407578,3.78077001156113,2.74033007908257,4.5323633843382,3.37511250115903,4.95353323546643,7.25027854374727,5.1776031175182,0.93408612825759,3.99024873401031,2.21953687480374,1.21553358534147,0.838452650511929,0.183843508450014,0.888986911206461,0.412070114477788,0.962757628775446,0.758091635291392,1.2673964994512,0.943131706930381,0.749132059759059,0.384150914429216,0.631790158511746,0.952587382566147,0.695305955669133,0.77163688185482,0.412085900803307,0.588795680537589,1.37147700954166,0.887379030796687,0.715308569841963,1.0174249164263,0.564656282491984,0.761531471025089,0.914639864363863,0.526139422875686,1.22223702461276,2.80571135828869,0.593175090620871,0.689531376628944,1.22769312950907,0.77468420592983,0,1.74867404556562,0,0.644613162144895,0,0.220591419119515,0 | |||
|short_description=p8@Sgk1 | |||
}} |
Revision as of 05:53, 4 August 2015
Short description: | p8@Sgk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Sgk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2546 |
Association with transcript: | 30bp_to_ENSMUST00000120509, NM_001161845, uc007eou.1, uc007eov.2_5end |
EntrezGene: | 20393 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.07e-21 | 23 |
neuroblast (sensu Vertebrata) | 9.07e-21 | 23 |
neuron | 7.78e-13 | 33 |
neuronal stem cell | 7.78e-13 | 33 |
neuroblast | 7.78e-13 | 33 |
electrically signaling cell | 7.78e-13 | 33 |
electrically responsive cell | 4.56e-10 | 39 |
electrically active cell | 4.56e-10 | 39 |
neural cell | 1.14e-08 | 43 |
ectodermal cell | 2.32e-08 | 44 |
neurectodermal cell | 2.32e-08 | 44 |