FFCP PHASE1:Mm9::chr10:18127642..18127661,+: Difference between revisions
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{{FFCP|EntrezGene=215819|HGNC=|MCL_coexpression_id=756|UniProt=Q8CAF4|association_with_transcript=161bp_to_ENSMUST00000037341,ENSMUST00000160602,NM_173390,uc007emh.1,uc007emi.1_5end|description=CAGE_peak_6_at_Nhsl1_5end|id=chr10:18127642..18127661,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,7.86e-23,3;CL:0002563,5.12e-08,9;CL:0002251,5.12e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001242!1.97e-09!13;UBERON:0000060!1.97e-09!13;UBERON:0001262!1.97e-09!13;UBERON:0004786!1.97e-09!13;UBERON:0000160!2.96e-09!43;UBERON:0000344!4.34e-09!15;UBERON:0000014!2.12e-07!5;UBERON:0001003!2.12e-07!5;UBERON:0002097!2.12e-07!5;UBERON:0002199!2.12e-07!5;UBERON:0007029!2.12e-07!5;UBERON:0007376!2.12e-07!5;UBERON:0002416!2.12e-07!5;UBERON:0007383!2.12e-07!5;UBERON:0005409!7.02e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000014,7.35e-24,5;UBERON:0001003,7.35e-24,5;UBERON:0002097,7.35e-24,5;UBERON:0002199,7.35e-24,5;UBERON:0007029,7.35e-24,5;UBERON:0007376,7.35e-24,5;UBERON:0002416,7.35e-24,5;UBERON:0007383,7.35e-24,5;UBERON:0000080,1.60e-17,4;UBERON:0005904,1.60e-17,4;UBERON:0006947,1.60e-17,4;UBERON:0002120,1.60e-17,4;UBERON:0004054,1.60e-17,4;UBERON:0004875,1.60e-17,4;UBERON:0004876,1.60e-17,4;UBERON:0005721,1.60e-17,4;UBERON:0005754,1.60e-17,4;UBERON:0007297,1.60e-17,4;UBERON:0010147,3.12e-15,2;UBERON:0003937,3.12e-15,2;UBERON:0005399,3.12e-15,2;UBERON:0001301,3.67e-11,3;UBERON:0006555,3.67e-11,3;UBERON:0005103,3.67e-11,3;UBERON:0000083,3.67e-11,3;UBERON:0009201,3.67e-11,3;UBERON:0004819,3.67e-11,3;UBERON:0006553,3.67e-11,3;UBERON:0003074,3.67e-11,3;UBERON:0003060,3.67e-11,3;UBERON:0000058,2.82e-10,7;UBERON:0003064,9.48e-09,14;UBERON:0000998,1.47e-08,1;UBERON:0007194,1.47e-08,1;UBERON:0006868,1.47e-08,1;UBERON:0002367,2.44e-08,1;UBERON:0009846,2.44e-08,1;UBERON:0003353,2.44e-08,1;UBERON:0004902,2.44e-08,1;UBERON:0003820,2.44e-08,1;UBERON:0009847,2.44e-08,1;UBERON:0003102,2.49e-08,22;UBERON:0004175,4.11e-08,9;UBERON:0003350,5.12e-08,9;UBERON:0004808,5.12e-08,9;UBERON:0001277,5.12e-08,9;UBERON:0003101,1.10e-07,16;UBERON:0000079,1.10e-07,16;UBERON:0003887,2.37e-07,10;UBERON:0006554,7.47e-07,18;UBERON:0004122,9.46e-07,5|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,4.62162591602039,2.65975432573588,1.83752420636132,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0.270011876663381,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0.131886287730194,0,0.52091337055676,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,2.98576729464223,8.33985102831127,0,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0.949058123089023,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0.432276099749388,1.1948476395262,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0.295220295959204,0.627994911365499,0.740382983530803,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.896987067609561,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,1.32317038832977,2.96795255294664,0.807322133479528,1.74907482291652,2.626191568069,3.44695889464629,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.749431733813838,0.233931608445408,0,0.382576664137687,0,0|short_description=p6@Nhsl1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:215819 | |||
|HGNC= | |||
|MCL_coexpression_id=756 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CAF4 | |||
|association_with_transcript=161bp_to_ENSMUST00000037341,ENSMUST00000160602,NM_173390,uc007emh.1,uc007emi.1_5end | |||
|cluster_id=chr10:18127642..18127661,+ | |||
|description=CAGE_peak_6_at_Nhsl1_5end | |||
|id=chr10:18127642..18127661,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,7.86e-23,3;CL:0002563,5.12e-08,9;CL:0002251,5.12e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!1.97e-09!13;UBERON:0000060!1.97e-09!13;UBERON:0001262!1.97e-09!13;UBERON:0004786!1.97e-09!13;UBERON:0000160!2.96e-09!43;UBERON:0000344!4.34e-09!15;UBERON:0000014!2.12e-07!5;UBERON:0001003!2.12e-07!5;UBERON:0002097!2.12e-07!5;UBERON:0002199!2.12e-07!5;UBERON:0007029!2.12e-07!5;UBERON:0007376!2.12e-07!5;UBERON:0002416!2.12e-07!5;UBERON:0007383!2.12e-07!5;UBERON:0005409!7.02e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,7.35e-24,5;UBERON:0001003,7.35e-24,5;UBERON:0002097,7.35e-24,5;UBERON:0002199,7.35e-24,5;UBERON:0007029,7.35e-24,5;UBERON:0007376,7.35e-24,5;UBERON:0002416,7.35e-24,5;UBERON:0007383,7.35e-24,5;UBERON:0000080,1.60e-17,4;UBERON:0005904,1.60e-17,4;UBERON:0006947,1.60e-17,4;UBERON:0002120,1.60e-17,4;UBERON:0004054,1.60e-17,4;UBERON:0004875,1.60e-17,4;UBERON:0004876,1.60e-17,4;UBERON:0005721,1.60e-17,4;UBERON:0005754,1.60e-17,4;UBERON:0007297,1.60e-17,4;UBERON:0010147,3.12e-15,2;UBERON:0003937,3.12e-15,2;UBERON:0005399,3.12e-15,2;UBERON:0001301,3.67e-11,3;UBERON:0006555,3.67e-11,3;UBERON:0005103,3.67e-11,3;UBERON:0000083,3.67e-11,3;UBERON:0009201,3.67e-11,3;UBERON:0004819,3.67e-11,3;UBERON:0006553,3.67e-11,3;UBERON:0003074,3.67e-11,3;UBERON:0003060,3.67e-11,3;UBERON:0000058,2.82e-10,7;UBERON:0003064,9.48e-09,14;UBERON:0000998,1.47e-08,1;UBERON:0007194,1.47e-08,1;UBERON:0006868,1.47e-08,1;UBERON:0002367,2.44e-08,1;UBERON:0009846,2.44e-08,1;UBERON:0003353,2.44e-08,1;UBERON:0004902,2.44e-08,1;UBERON:0003820,2.44e-08,1;UBERON:0009847,2.44e-08,1;UBERON:0003102,2.49e-08,22;UBERON:0004175,4.11e-08,9;UBERON:0003350,5.12e-08,9;UBERON:0004808,5.12e-08,9;UBERON:0001277,5.12e-08,9;UBERON:0003101,1.10e-07,16;UBERON:0000079,1.10e-07,16;UBERON:0003887,2.37e-07,10;UBERON:0006554,7.47e-07,18;UBERON:0004122,9.46e-07,5 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,4.62162591602039,2.65975432573588,1.83752420636132,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0.270011876663381,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0.131886287730194,0,0.52091337055676,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,2.98576729464223,8.33985102831127,0,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0.949058123089023,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0.432276099749388,1.1948476395262,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0.295220295959204,0.627994911365499,0.740382983530803,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.896987067609561,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,1.32317038832977,2.96795255294664,0.807322133479528,1.74907482291652,2.626191568069,3.44695889464629,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.749431733813838,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p6@Nhsl1 | |||
}} |
Revision as of 04:27, 4 August 2015
Short description: | p6@Nhsl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Nhsl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:756 |
Association with transcript: | 161bp_to_ENSMUST00000037341, ENSMUST00000160602, NM_173390, uc007emh.1, uc007emi.1_5end |
EntrezGene: | 215819 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 7.86e-23 | 3 |
intestinal epithelial cell | 5.12e-08 | 9 |
epithelial cell of alimentary canal | 5.12e-08 | 9 |