FFCP PHASE1:Mm9::chr14:26661709..26661720,+: Difference between revisions
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{{FFCP|EntrezGene=100039484,100039503,11744|HGNC=|MCL_coexpression_id=533|UniProt=P97384,D3Z7U0|association_with_transcript=40bp_to_ENSMUST00000022416,ENSMUST00000112364,ENSMUST00000124704,ENSMUST00000133547_5end|description=CAGE_peak_4_at_Gm2260_5end,CAGE_peak_4_at_Gm2274_5end,CAGE_peak_6_at_Anxa11_5end|id=chr14:26661709..26661720,+|ontology_enrichment_celltype=CL:0002563!8.92e-07!9;CL:0002251!8.92e-07!9|ontology_enrichment_celltype_v019_2=CL:0002076,1.18e-09,15;CL:0002563,3.53e-09,9;CL:0002251,3.53e-09,9;CL:0000066,4.64e-08,25;CL:0000223,5.80e-07,20;CL:0000239,6.58e-07,6;CL:0000677,6.58e-07,6;CL:0000584,6.58e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.53e-12!59;UBERON:0000160!3.41e-11!43;UBERON:0000344!2.82e-10!15;UBERON:0001242!3.59e-09!13;UBERON:0000060!3.59e-09!13;UBERON:0001262!3.59e-09!13;UBERON:0004786!3.59e-09!13;UBERON:0004923!1.76e-08!24;UBERON:0007023!3.48e-07!51;UBERON:0003350!8.92e-07!9;UBERON:0004808!8.92e-07!9;UBERON:0001277!8.92e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.23e-20,31;UBERON:0005409,1.94e-19,47;UBERON:0000344,2.84e-14,15;UBERON:0001242,1.16e-12,13;UBERON:0001262,1.16e-12,13;UBERON:0004786,1.16e-12,13;UBERON:0004923,1.14e-10,24;UBERON:0004119,2.85e-09,118;UBERON:0000925,2.85e-09,118;UBERON:0006595,2.85e-09,118;UBERON:0003350,3.53e-09,9;UBERON:0004808,3.53e-09,9;UBERON:0001277,3.53e-09,9;UBERON:0001007,2.67e-08,116;UBERON:0001555,2.67e-08,116;UBERON:0007026,2.67e-08,116;UBERON:0004921,2.12e-07,114;UBERON:0007023,2.29e-07,51;UBERON:0000485,6.19e-07,11|phase1_expression=0,10.4692622291808,9.55498402718026,12.0985684522732,8.01433167914156,8.05820505177071,5.13947809310157,0,0.703943610758334,0.70219357896598,0.171217968225505,0,0.342401459862411,0.0874204024189974,0.333109761815663,0,0,0,0,0,1.27564935226605,0.397163804803541,0.522399578277871,5.11975752938901,7.79991555628378,12.0588712464154,9.90752591165872,7.32602191132023,8.55105387553682,7.56090389279792,9.5344119581781,0,0.61506478758457,0,5.19932915552294,5.48574329683025,5.71674197534634,15.9042019680025,7.813353445238,9.42342739152837,11.1763982725893,12.9778642142105,12.62326917881,0.629484089877886,0.912392380975631,0.367093504323363,3.9119567217402,1.30815093828268,2.85592037554813,1.1665793944457,1.39986421625363,1.43752564364972,0.335565212115473,0,0.336093799142464,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,1.3498495759221,1.97773272513395,1.4209602298922,1.49800055259202,1.53687322128622,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.558365998002762,0,0.15279824777681,0.294628585473668,0,0,0.832988126665025,0.529000920747499,1.44932244350839,0.860423876981386,0,0.539703191637817,0,0,1.26399978118577,0.852151612890289,1.55871602761721,0,0,0,0,7.11066703153331,2.81438353314578,3.54703811665138,5.05524445014783,2.05530983494308,1.03575153458869,0.445326417194474,0.346970653532272,0.608930956624282,0.461230994512117,0.150722640552623,0.470354828542819,0.753999547978053,4.6967043869531,1.44599356919912,0.884610551949874,1.45590164952668,1.76673214768315,0.484875253135222,5.59175283654366,0.585561594023094,0,7.15279754584056,0.958520996047362,0.599902730993408,0.381210681219194,0.299581278809645,0,0,1.39059456153821,0.255715457330331,0.20778804455956,0.324482526135515,0.712875546952214,0.995255764880744,0,0.631325567659422,0.130120442962704,0,0.720248519221397,0.150704817835715,0.136072998302656,0.384341160854549,0.187403449119458,0.517406741478031,0.215567992932842,0,0,0,0.556094498451196,0.696504333044333,0,0.199034266818493,0,0.772043721344145,0.568326998791185,0.207125772535502,0,0.540186184383045,0.23674473558521,0.196764231747404,0.308534225774757,0.697601834251224,0.268273401399619,1.28441876603886,0.822799249567402,0.820837320395476,1.29710095273369,0.877199924551994,0.219550115291051,1.34206418760372,1.47202963994889,0.205809224758569,6.27795687669216,4.49565963328025,0,0.464473343720877,1.28867461322093,2.21851877085677,3.11329261382818,2.66315876557583,3.32170343081158,3.29397909448022,2.76468729680296,2.18852119245266,1.75467678407208,6.29173586057955,8.21324589523838,5.77509692437665,0.189667900953082,0.342745537829186,2.25415471346161,0.407302655690628,1.16371492300575,1.61312385747733,1.64414996523069,1.77132177575523,1.8839847340965,2.22114895059241,0.296452627087149,0,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0.358794827043824,0.964887042726734,2.95605104266567,0,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,1.17080188714679,0.945810864637146,0.44292937929755,1.59454768657487,1.3109065177259,2.59027472798843,2.16973587872267,0,0,1.96705709207614,1.10374698521893,0.321101179975584,0,0.491804836130026,1.76729649043061,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0,0,0,0,0,0.99358059645788,0.35613120733451,1.30309567482861,1.15479086080775,1.32745138339963,0,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,2.58428293168221,0.363533729477506,1.78248689192361,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0,0.643011105094777,0.177340233642274,0,0,0.913394847343798,10.3255551548033,4.02480934641258,3.52845436887939,1.6488625294148,0.645857706783622,0.965006798850494,0.835606408021955,0.656563598980245,4.08073171281791,0,0.512612642393558,0.412773735926445,0.555583582109135,0,0.27338845544205,0.686334519619568,0.339956859987711,0.979660166265606,1.24379976423981,3.81868247206045,0.790839983952838,1.01659733563424,1.40406943068342,1.67270636811575,1.74690050996942,2.15782954215713,2.97552440611209,3.14107130380836,8.55458823725833,3.72803587852155,0.56369293868419,0.299033092087958,0.330916980914195,0.777804753376191,0.258319646955462,0.168956125490778,0.58678619322877,0.781226309063701,0.734015410979976,0,0.576060012515731,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.590758108698309,0.201932899896295,0.228620419965,0,0.194915761479505,0,0.584384510907845,3.40095575422817,0.665957860122194,1.52513556236109,2.3503846290971,0.965947970160952,2.81523713176773,1.46521299413812,2.57242054894879,3.00943262421218,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,1.01078884705519,0.25347929989024,0.377252682772152,0.842773567228942,0.512201219238954,1.03383844120104,0,0.579421629724277,0.578727661391115,0.824171801606613,0.883193520806384,0.342869252385415,0.354951612318675,0.715308569841963,0.436039249896986,0.752875043322645,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,1.12228454331548,0.237270036248348,0.689531376628944,0.409231043169689,0.77468420592983,0.771626443924566,0.999242311751784,0.233931608445408,1.71896843238639,3.06061331310149,1.54413993383661,0.927471342481686|short_description=p4@Gm2260,p4@Gm2274,p6@Anxa11}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100039484,entrezgene:100039503,entrezgene:11744 | |||
|HGNC= | |||
|MCL_coexpression_id=533 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P97384,uniprot:D3Z7U0 | |||
|association_with_transcript=40bp_to_ENSMUST00000022416,ENSMUST00000112364,ENSMUST00000124704,ENSMUST00000133547_5end | |||
|cluster_id=chr14:26661709..26661720,+ | |||
|description=CAGE_peak_4_at_Gm2260_5end,CAGE_peak_4_at_Gm2274_5end,CAGE_peak_6_at_Anxa11_5end | |||
|id=chr14:26661709..26661720,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.92e-07!9;CL:0002251!8.92e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.18e-09,15;CL:0002563,3.53e-09,9;CL:0002251,3.53e-09,9;CL:0000066,4.64e-08,25;CL:0000223,5.80e-07,20;CL:0000239,6.58e-07,6;CL:0000677,6.58e-07,6;CL:0000584,6.58e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.53e-12!59;UBERON:0000160!3.41e-11!43;UBERON:0000344!2.82e-10!15;UBERON:0001242!3.59e-09!13;UBERON:0000060!3.59e-09!13;UBERON:0001262!3.59e-09!13;UBERON:0004786!3.59e-09!13;UBERON:0004923!1.76e-08!24;UBERON:0007023!3.48e-07!51;UBERON:0003350!8.92e-07!9;UBERON:0004808!8.92e-07!9;UBERON:0001277!8.92e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.23e-20,31;UBERON:0005409,1.94e-19,47;UBERON:0000344,2.84e-14,15;UBERON:0001242,1.16e-12,13;UBERON:0001262,1.16e-12,13;UBERON:0004786,1.16e-12,13;UBERON:0004923,1.14e-10,24;UBERON:0004119,2.85e-09,118;UBERON:0000925,2.85e-09,118;UBERON:0006595,2.85e-09,118;UBERON:0003350,3.53e-09,9;UBERON:0004808,3.53e-09,9;UBERON:0001277,3.53e-09,9;UBERON:0001007,2.67e-08,116;UBERON:0001555,2.67e-08,116;UBERON:0007026,2.67e-08,116;UBERON:0004921,2.12e-07,114;UBERON:0007023,2.29e-07,51;UBERON:0000485,6.19e-07,11 | |||
|phase1_expression=0,10.4692622291808,9.55498402718026,12.0985684522732,8.01433167914156,8.05820505177071,5.13947809310157,0,0.703943610758334,0.70219357896598,0.171217968225505,0,0.342401459862411,0.0874204024189974,0.333109761815663,0,0,0,0,0,1.27564935226605,0.397163804803541,0.522399578277871,5.11975752938901,7.79991555628378,12.0588712464154,9.90752591165872,7.32602191132023,8.55105387553682,7.56090389279792,9.5344119581781,0,0.61506478758457,0,5.19932915552294,5.48574329683025,5.71674197534634,15.9042019680025,7.813353445238,9.42342739152837,11.1763982725893,12.9778642142105,12.62326917881,0.629484089877886,0.912392380975631,0.367093504323363,3.9119567217402,1.30815093828268,2.85592037554813,1.1665793944457,1.39986421625363,1.43752564364972,0.335565212115473,0,0.336093799142464,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,1.3498495759221,1.97773272513395,1.4209602298922,1.49800055259202,1.53687322128622,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.558365998002762,0,0.15279824777681,0.294628585473668,0,0,0.832988126665025,0.529000920747499,1.44932244350839,0.860423876981386,0,0.539703191637817,0,0,1.26399978118577,0.852151612890289,1.55871602761721,0,0,0,0,7.11066703153331,2.81438353314578,3.54703811665138,5.05524445014783,2.05530983494308,1.03575153458869,0.445326417194474,0.346970653532272,0.608930956624282,0.461230994512117,0.150722640552623,0.470354828542819,0.753999547978053,4.6967043869531,1.44599356919912,0.884610551949874,1.45590164952668,1.76673214768315,0.484875253135222,5.59175283654366,0.585561594023094,0,7.15279754584056,0.958520996047362,0.599902730993408,0.381210681219194,0.299581278809645,0,0,1.39059456153821,0.255715457330331,0.20778804455956,0.324482526135515,0.712875546952214,0.995255764880744,0,0.631325567659422,0.130120442962704,0,0.720248519221397,0.150704817835715,0.136072998302656,0.384341160854549,0.187403449119458,0.517406741478031,0.215567992932842,0,0,0,0.556094498451196,0.696504333044333,0,0.199034266818493,0,0.772043721344145,0.568326998791185,0.207125772535502,0,0.540186184383045,0.23674473558521,0.196764231747404,0.308534225774757,0.697601834251224,0.268273401399619,1.28441876603886,0.822799249567402,0.820837320395476,1.29710095273369,0.877199924551994,0.219550115291051,1.34206418760372,1.47202963994889,0.205809224758569,6.27795687669216,4.49565963328025,0,0.464473343720877,1.28867461322093,2.21851877085677,3.11329261382818,2.66315876557583,3.32170343081158,3.29397909448022,2.76468729680296,2.18852119245266,1.75467678407208,6.29173586057955,8.21324589523838,5.77509692437665,0.189667900953082,0.342745537829186,2.25415471346161,0.407302655690628,1.16371492300575,1.61312385747733,1.64414996523069,1.77132177575523,1.8839847340965,2.22114895059241,0.296452627087149,0,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0.358794827043824,0.964887042726734,2.95605104266567,0,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,1.17080188714679,0.945810864637146,0.44292937929755,1.59454768657487,1.3109065177259,2.59027472798843,2.16973587872267,0,0,1.96705709207614,1.10374698521893,0.321101179975584,0,0.491804836130026,1.76729649043061,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0,0,0,0,0,0.99358059645788,0.35613120733451,1.30309567482861,1.15479086080775,1.32745138339963,0,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,2.58428293168221,0.363533729477506,1.78248689192361,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0,0.643011105094777,0.177340233642274,0,0,0.913394847343798,10.3255551548033,4.02480934641258,3.52845436887939,1.6488625294148,0.645857706783622,0.965006798850494,0.835606408021955,0.656563598980245,4.08073171281791,0,0.512612642393558,0.412773735926445,0.555583582109135,0,0.27338845544205,0.686334519619568,0.339956859987711,0.979660166265606,1.24379976423981,3.81868247206045,0.790839983952838,1.01659733563424,1.40406943068342,1.67270636811575,1.74690050996942,2.15782954215713,2.97552440611209,3.14107130380836,8.55458823725833,3.72803587852155,0.56369293868419,0.299033092087958,0.330916980914195,0.777804753376191,0.258319646955462,0.168956125490778,0.58678619322877,0.781226309063701,0.734015410979976,0,0.576060012515731,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.590758108698309,0.201932899896295,0.228620419965,0,0.194915761479505,0,0.584384510907845,3.40095575422817,0.665957860122194,1.52513556236109,2.3503846290971,0.965947970160952,2.81523713176773,1.46521299413812,2.57242054894879,3.00943262421218,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,1.01078884705519,0.25347929989024,0.377252682772152,0.842773567228942,0.512201219238954,1.03383844120104,0,0.579421629724277,0.578727661391115,0.824171801606613,0.883193520806384,0.342869252385415,0.354951612318675,0.715308569841963,0.436039249896986,0.752875043322645,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,1.12228454331548,0.237270036248348,0.689531376628944,0.409231043169689,0.77468420592983,0.771626443924566,0.999242311751784,0.233931608445408,1.71896843238639,3.06061331310149,1.54413993383661,0.927471342481686 | |||
|short_description=p4@Gm2260,p4@Gm2274,p6@Anxa11 | |||
}} |
Revision as of 04:15, 4 August 2015
Short description: | p4@Gm2260, p4@Gm2274, p6@Anxa11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gm2260_5end, CAGE_peak_4_at_Gm2274_5end, CAGE_peak_6_at_Anxa11_5end |
Coexpression cluster: | MCL_coexpression_mm9:533 |
Association with transcript: | 40bp_to_ENSMUST00000022416, ENSMUST00000112364, ENSMUST00000124704, ENSMUST00000133547_5end |
EntrezGene: | 100039484,100039503,11744 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.18e-09 | 15 |
intestinal epithelial cell | 3.53e-09 | 9 |
epithelial cell of alimentary canal | 3.53e-09 | 9 |
epithelial cell | 4.64e-08 | 25 |
endodermal cell | 5.80e-07 | 20 |
brush border epithelial cell | 6.58e-07 | 6 |
gut absorptive cell | 6.58e-07 | 6 |
enterocyte | 6.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.23e-20 | 31 |
gastrointestinal system | 1.94e-19 | 47 |
mucosa | 2.84e-14 | 15 |
intestinal mucosa | 1.16e-12 | 13 |
wall of intestine | 1.16e-12 | 13 |
gastrointestinal system mucosa | 1.16e-12 | 13 |
organ component layer | 1.14e-10 | 24 |
endoderm-derived structure | 2.85e-09 | 118 |
endoderm | 2.85e-09 | 118 |
presumptive endoderm | 2.85e-09 | 118 |
epithelium of mucosa | 3.53e-09 | 9 |
gastrointestinal system epithelium | 3.53e-09 | 9 |
intestinal epithelium | 3.53e-09 | 9 |
digestive system | 2.67e-08 | 116 |
digestive tract | 2.67e-08 | 116 |
primitive gut | 2.67e-08 | 116 |
subdivision of digestive tract | 2.12e-07 | 114 |
adult organism | 2.29e-07 | 51 |
simple columnar epithelium | 6.19e-07 | 11 |