FFCP PHASE1:Mm9::chr11:82930370..82930384,+: Difference between revisions
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{{FFCP|EntrezGene=20555|HGNC=|MCL_coexpression_id=3|UniProt=Q9Z0I7|association_with_transcript=19bp_to_ENSMUST00000037994_5end|description=CAGE_peak_4_at_Slfn1_5end|id=chr11:82930370..82930384,+|ontology_enrichment_celltype=CL:0000791!1.05e-10!9;CL:0000789!1.05e-10!9;CL:0002420!1.05e-10!9;CL:0002419!1.05e-10!9;CL:0000790!1.05e-10!9;CL:0000624!9.01e-10!8;CL:0000084!3.30e-08!11;CL:0000827!3.30e-08!11;CL:0000893!8.26e-08!6;CL:0002489!8.26e-08!6;CL:0000898!8.26e-08!6;CL:0000809!8.26e-08!6;CL:0000810!8.26e-08!6;CL:0000895!8.26e-08!6;CL:0000808!8.26e-08!6;CL:0000894!8.26e-08!6;CL:0000806!8.26e-08!6;CL:0000807!8.26e-08!6;CL:0000805!8.26e-08!6;CL:0002425!8.26e-08!6;CL:0002436!8.26e-08!6;CL:0002427!8.26e-08!6;CL:0002428!8.26e-08!6;CL:0002429!8.26e-08!6;CL:0002433!8.26e-08!6;CL:0002431!8.26e-08!6;CL:0002432!8.26e-08!6;CL:0000838!2.78e-07!12|ontology_enrichment_celltype_v019_2=CL:0000791,9.18e-25,9;CL:0000789,9.18e-25,9;CL:0002420,9.18e-25,9;CL:0002419,9.18e-25,9;CL:0000790,9.18e-25,9;CL:0000624,2.19e-22,8;CL:0000084,5.86e-20,11;CL:0000827,5.86e-20,11;CL:0000838,3.72e-18,12;CL:0000893,2.07e-17,6;CL:0002489,2.07e-17,6;CL:0000898,2.07e-17,6;CL:0000809,2.07e-17,6;CL:0000810,2.07e-17,6;CL:0000895,2.07e-17,6;CL:0000808,2.07e-17,6;CL:0000894,2.07e-17,6;CL:0000806,2.07e-17,6;CL:0000807,2.07e-17,6;CL:0000805,2.07e-17,6;CL:0002425,2.07e-17,6;CL:0002436,2.07e-17,6;CL:0002427,2.07e-17,6;CL:0002428,2.07e-17,6;CL:0002429,2.07e-17,6;CL:0002433,2.07e-17,6;CL:0002431,2.07e-17,6;CL:0002432,2.07e-17,6;CL:0000542,1.25e-16,13;CL:0000051,1.25e-16,13;CL:0002031,3.55e-16,25;CL:0000738,5.28e-15,17;CL:0002087,5.28e-15,17;CL:0000988,4.90e-12,32;CL:0002032,4.90e-12,32;CL:0000037,4.90e-12,32;CL:0000837,4.90e-12,32;CL:0002320,1.48e-07,46;CL:0000134,1.48e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.75e-10,3;DOID:4045,4.75e-10,3|ontology_enrichment_uberon=UBERON:0004177!4.05e-15!29;UBERON:0002390!4.07e-12!45;UBERON:0003061!4.07e-12!45;UBERON:0002193!5.91e-12!48;UBERON:0002370!1.81e-10!23;UBERON:0000974!1.81e-10!23;UBERON:0004807!1.81e-10!23;UBERON:0005058!1.81e-10!23;UBERON:0003351!1.81e-10!23;UBERON:0009113!1.81e-10!23;UBERON:0003295!1.81e-10!23;UBERON:0009722!1.81e-10!23;UBERON:0005562!1.81e-10!23;UBERON:0007690!1.81e-10!23;UBERON:0000065!7.55e-10!41;UBERON:0006562!8.65e-10!24;UBERON:0003408!8.65e-10!24;UBERON:0001557!8.65e-10!24;UBERON:0001042!8.65e-10!24;UBERON:0008814!8.65e-10!24;UBERON:0009145!8.65e-10!24;UBERON:0001004!2.01e-09!42;UBERON:0005057!4.15e-09!51;UBERON:0002405!1.35e-08!70;UBERON:0003081!1.84e-08!88;UBERON:0000072!4.46e-08!27|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.47e-18,48;UBERON:0002405,4.47e-18,48;UBERON:0004177,6.58e-18,29;UBERON:0005057,6.58e-18,29;UBERON:0002390,2.16e-17,45;UBERON:0003061,2.16e-17,45;UBERON:0002370,1.27e-14,23;UBERON:0000974,1.27e-14,23;UBERON:0004807,1.27e-14,23;UBERON:0005058,1.27e-14,23;UBERON:0003351,1.27e-14,23;UBERON:0009113,1.27e-14,23;UBERON:0003295,1.27e-14,23;UBERON:0009722,1.27e-14,23;UBERON:0005562,1.27e-14,23;UBERON:0007690,1.27e-14,23;UBERON:0000077,2.77e-14,35;UBERON:0006562,6.53e-14,24;UBERON:0003408,6.53e-14,24;UBERON:0001557,6.53e-14,24;UBERON:0001042,6.53e-14,24;UBERON:0008814,6.53e-14,24;UBERON:0009145,6.53e-14,24;UBERON:0000072,4.27e-12,27;UBERON:0003081,4.13e-09,87;UBERON:0000065,1.53e-08,41;UBERON:0007811,1.78e-08,36;UBERON:0001004,2.81e-08,42;UBERON:0000926,4.18e-08,120;UBERON:0004120,4.18e-08,120;UBERON:0006603,4.18e-08,120;UBERON:0002384,1.48e-07,46;UBERON:0000490,2.29e-07,66|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,10.98152032783,11.0010327371337,4.10923123741212,3.90883579077148,16.4352700733957,8.47977903464275,0,0.404950534779652,0,1.26184866143295,1.09691546884591,1.69755860719212,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,90.4028322391721,56.2561448057136,75.9109428762007,94.7052695729933,57.3758207365094,67.4859390713303,0,0,0,0,0,0,0,0,0,0,3.62681071005672,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,3.36619248741323,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0.289198713839823,3.5384422077995,0.161766849947409,0.220841518460394,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.870848794270651,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0.863088412352432,0.324270453550071,0,1.43768206527355,0,0,0,0.179397413521912,0,3.14080423283228,0,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.664394068946325,0,0.983179888294428,0.518054945597687,0.289298117163023,0,1.08781136763742,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,2.39219233116994,1.23832120777933,6.66700298530962,0.376736914009382,0.410082683163076,0.457556346413045,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,1.26404448251271,0,0,0,0.358053391334963,0.39736270956253,0.721172697119813,0.590758108698309,1.00966449948148,0.533447646584999,1.00826185136841,1.36441033035653,1.15454209968395,1.05189211963412,0,0,0,0,0,0.750729901804728,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0,0,0,0.701794825336225,0,0.191288332068843,0.441182838239031,0|short_description=p4@Slfn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20555 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0I7 | |||
|association_with_transcript=19bp_to_ENSMUST00000037994_5end | |||
|cluster_id=chr11:82930370..82930384,+ | |||
|description=CAGE_peak_4_at_Slfn1_5end | |||
|id=chr11:82930370..82930384,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.05e-10!9;CL:0000789!1.05e-10!9;CL:0002420!1.05e-10!9;CL:0002419!1.05e-10!9;CL:0000790!1.05e-10!9;CL:0000624!9.01e-10!8;CL:0000084!3.30e-08!11;CL:0000827!3.30e-08!11;CL:0000893!8.26e-08!6;CL:0002489!8.26e-08!6;CL:0000898!8.26e-08!6;CL:0000809!8.26e-08!6;CL:0000810!8.26e-08!6;CL:0000895!8.26e-08!6;CL:0000808!8.26e-08!6;CL:0000894!8.26e-08!6;CL:0000806!8.26e-08!6;CL:0000807!8.26e-08!6;CL:0000805!8.26e-08!6;CL:0002425!8.26e-08!6;CL:0002436!8.26e-08!6;CL:0002427!8.26e-08!6;CL:0002428!8.26e-08!6;CL:0002429!8.26e-08!6;CL:0002433!8.26e-08!6;CL:0002431!8.26e-08!6;CL:0002432!8.26e-08!6;CL:0000838!2.78e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.18e-25,9;CL:0000789,9.18e-25,9;CL:0002420,9.18e-25,9;CL:0002419,9.18e-25,9;CL:0000790,9.18e-25,9;CL:0000624,2.19e-22,8;CL:0000084,5.86e-20,11;CL:0000827,5.86e-20,11;CL:0000838,3.72e-18,12;CL:0000893,2.07e-17,6;CL:0002489,2.07e-17,6;CL:0000898,2.07e-17,6;CL:0000809,2.07e-17,6;CL:0000810,2.07e-17,6;CL:0000895,2.07e-17,6;CL:0000808,2.07e-17,6;CL:0000894,2.07e-17,6;CL:0000806,2.07e-17,6;CL:0000807,2.07e-17,6;CL:0000805,2.07e-17,6;CL:0002425,2.07e-17,6;CL:0002436,2.07e-17,6;CL:0002427,2.07e-17,6;CL:0002428,2.07e-17,6;CL:0002429,2.07e-17,6;CL:0002433,2.07e-17,6;CL:0002431,2.07e-17,6;CL:0002432,2.07e-17,6;CL:0000542,1.25e-16,13;CL:0000051,1.25e-16,13;CL:0002031,3.55e-16,25;CL:0000738,5.28e-15,17;CL:0002087,5.28e-15,17;CL:0000988,4.90e-12,32;CL:0002032,4.90e-12,32;CL:0000037,4.90e-12,32;CL:0000837,4.90e-12,32;CL:0002320,1.48e-07,46;CL:0000134,1.48e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.75e-10,3;DOID:4045,4.75e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.05e-15!29;UBERON:0002390!4.07e-12!45;UBERON:0003061!4.07e-12!45;UBERON:0002193!5.91e-12!48;UBERON:0002370!1.81e-10!23;UBERON:0000974!1.81e-10!23;UBERON:0004807!1.81e-10!23;UBERON:0005058!1.81e-10!23;UBERON:0003351!1.81e-10!23;UBERON:0009113!1.81e-10!23;UBERON:0003295!1.81e-10!23;UBERON:0009722!1.81e-10!23;UBERON:0005562!1.81e-10!23;UBERON:0007690!1.81e-10!23;UBERON:0000065!7.55e-10!41;UBERON:0006562!8.65e-10!24;UBERON:0003408!8.65e-10!24;UBERON:0001557!8.65e-10!24;UBERON:0001042!8.65e-10!24;UBERON:0008814!8.65e-10!24;UBERON:0009145!8.65e-10!24;UBERON:0001004!2.01e-09!42;UBERON:0005057!4.15e-09!51;UBERON:0002405!1.35e-08!70;UBERON:0003081!1.84e-08!88;UBERON:0000072!4.46e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.47e-18,48;UBERON:0002405,4.47e-18,48;UBERON:0004177,6.58e-18,29;UBERON:0005057,6.58e-18,29;UBERON:0002390,2.16e-17,45;UBERON:0003061,2.16e-17,45;UBERON:0002370,1.27e-14,23;UBERON:0000974,1.27e-14,23;UBERON:0004807,1.27e-14,23;UBERON:0005058,1.27e-14,23;UBERON:0003351,1.27e-14,23;UBERON:0009113,1.27e-14,23;UBERON:0003295,1.27e-14,23;UBERON:0009722,1.27e-14,23;UBERON:0005562,1.27e-14,23;UBERON:0007690,1.27e-14,23;UBERON:0000077,2.77e-14,35;UBERON:0006562,6.53e-14,24;UBERON:0003408,6.53e-14,24;UBERON:0001557,6.53e-14,24;UBERON:0001042,6.53e-14,24;UBERON:0008814,6.53e-14,24;UBERON:0009145,6.53e-14,24;UBERON:0000072,4.27e-12,27;UBERON:0003081,4.13e-09,87;UBERON:0000065,1.53e-08,41;UBERON:0007811,1.78e-08,36;UBERON:0001004,2.81e-08,42;UBERON:0000926,4.18e-08,120;UBERON:0004120,4.18e-08,120;UBERON:0006603,4.18e-08,120;UBERON:0002384,1.48e-07,46;UBERON:0000490,2.29e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,10.98152032783,11.0010327371337,4.10923123741212,3.90883579077148,16.4352700733957,8.47977903464275,0,0.404950534779652,0,1.26184866143295,1.09691546884591,1.69755860719212,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,90.4028322391721,56.2561448057136,75.9109428762007,94.7052695729933,57.3758207365094,67.4859390713303,0,0,0,0,0,0,0,0,0,0,3.62681071005672,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,3.36619248741323,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0.289198713839823,3.5384422077995,0.161766849947409,0.220841518460394,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.870848794270651,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0.863088412352432,0.324270453550071,0,1.43768206527355,0,0,0,0.179397413521912,0,3.14080423283228,0,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.664394068946325,0,0.983179888294428,0.518054945597687,0.289298117163023,0,1.08781136763742,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,2.39219233116994,1.23832120777933,6.66700298530962,0.376736914009382,0.410082683163076,0.457556346413045,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,1.26404448251271,0,0,0,0.358053391334963,0.39736270956253,0.721172697119813,0.590758108698309,1.00966449948148,0.533447646584999,1.00826185136841,1.36441033035653,1.15454209968395,1.05189211963412,0,0,0,0,0,0.750729901804728,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0,0,0,0.701794825336225,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p4@Slfn1 | |||
}} |
Revision as of 04:10, 4 August 2015
Short description: | p4@Slfn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slfn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 19bp_to_ENSMUST00000037994_5end |
EntrezGene: | 20555 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.47e-18 | 48 |
immune system | 4.47e-18 | 48 |
hemopoietic organ | 6.58e-18 | 29 |
immune organ | 6.58e-18 | 29 |
hematopoietic system | 2.16e-17 | 45 |
blood island | 2.16e-17 | 45 |
thymus | 1.27e-14 | 23 |
neck | 1.27e-14 | 23 |
respiratory system epithelium | 1.27e-14 | 23 |
hemolymphoid system gland | 1.27e-14 | 23 |
pharyngeal epithelium | 1.27e-14 | 23 |
thymic region | 1.27e-14 | 23 |
pharyngeal gland | 1.27e-14 | 23 |
entire pharyngeal arch endoderm | 1.27e-14 | 23 |
thymus primordium | 1.27e-14 | 23 |
early pharyngeal endoderm | 1.27e-14 | 23 |
mixed endoderm/mesoderm-derived structure | 2.77e-14 | 35 |
pharynx | 6.53e-14 | 24 |
gland of gut | 6.53e-14 | 24 |
upper respiratory tract | 6.53e-14 | 24 |
chordate pharynx | 6.53e-14 | 24 |
pharyngeal arch system | 6.53e-14 | 24 |
pharyngeal region of foregut | 6.53e-14 | 24 |
segment of respiratory tract | 4.27e-12 | 27 |
lateral plate mesoderm | 4.13e-09 | 87 |
respiratory tract | 1.53e-08 | 41 |
craniocervical region | 1.78e-08 | 36 |
respiratory system | 2.81e-08 | 42 |
mesoderm | 4.18e-08 | 120 |
mesoderm-derived structure | 4.18e-08 | 120 |
presumptive mesoderm | 4.18e-08 | 120 |
connective tissue | 1.48e-07 | 46 |
unilaminar epithelium | 2.29e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.75e-10 | 3 |
muscle cancer | 4.75e-10 | 3 |