FFCP PHASE1:Mm9::chr8:80960539..80960548,-: Difference between revisions
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{{FFCP|EntrezGene=18997|HGNC=|MCL_coexpression_id=133|UniProt=Q63934|association_with_transcript=2bp_to_ENSMUST00000034115,NM_138944,uc009mhy.1_5end|description=CAGE_peak_1_at_Pou4f2_5end|id=chr8:80960539..80960548,-|ontology_enrichment_celltype=CL:0000120!8.72e-07!3|ontology_enrichment_celltype_v019_2=CL:0000120,1.78e-21,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!4.35e-16!9;UBERON:0000019!4.35e-16!9;UBERON:0000047!4.35e-16!9;UBERON:0004088!4.35e-16!9;UBERON:0002104!4.35e-16!9;UBERON:0001456!4.35e-16!9;UBERON:0003072!4.35e-16!9;UBERON:0003071!4.35e-16!9;UBERON:0004128!4.35e-16!9;UBERON:0000020!3.92e-14!12;UBERON:0001032!3.92e-14!12;UBERON:0004456!3.92e-14!12;UBERON:0005085!7.58e-13!13;UBERON:0001444!9.40e-13!11;UBERON:0001948!4.48e-08!5;UBERON:0002315!4.48e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.26e-36,9;UBERON:0000019,1.26e-36,9;UBERON:0000047,1.26e-36,9;UBERON:0010312,1.26e-36,9;UBERON:0004088,1.26e-36,9;UBERON:0002104,1.26e-36,9;UBERON:0001456,1.26e-36,9;UBERON:0003072,1.26e-36,9;UBERON:0004128,1.26e-36,9;UBERON:0003071,1.26e-36,9;UBERON:0001444,6.48e-30,11;UBERON:0000020,2.14e-27,12;UBERON:0001032,2.14e-27,12;UBERON:0004456,2.14e-27,12;UBERON:0000033,2.91e-25,13;UBERON:0005085,2.91e-25,13;UBERON:0004121,3.35e-09,95;UBERON:0000924,3.35e-09,95;UBERON:0006601,3.35e-09,95;UBERON:0007811,7.92e-09,36;UBERON:0003056,3.43e-08,49;UBERON:0002259,8.96e-08,1;UBERON:0002314,8.96e-08,1;UBERON:0004061,8.96e-08,1;UBERON:0006777,8.96e-08,1;UBERON:0005882,8.96e-08,1;UBERON:0002346,1.00e-07,64;UBERON:0003075,1.00e-07,64;UBERON:0007284,1.00e-07,64;UBERON:0000153,2.67e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47412674750713,7.40587370980846,5.07065122804943,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0,0,0,0.274462930807229,0,0,0,0,0.294628585473668,0.142371680799103,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0,0,0,0,0,0,0,0,0,0.210441855886474,6.8963834770233,14.7137346837423,14.2249082546226,3.31550599238573,1.76894897793452,0.896796041993948,1.40552586839593,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.243106717068294,1.25767897576789,0.735374033800057,0.222246727801615,0,0.320919209591815,0,0.760437899670719,0.377252682772152,0.187283014939765,0.384150914429216,0.287177344778066,0,0.811190281613988,0,0.824171801606613,0.735994600671987,0,0.532427418478012,0.476872379894642,0.436039249896986,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p1@Pou4f2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18997 | |||
|HGNC= | |||
|MCL_coexpression_id=133 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q63934 | |||
|association_with_transcript=2bp_to_ENSMUST00000034115,NM_138944,uc009mhy.1_5end | |||
|cluster_id=chr8:80960539..80960548,- | |||
|description=CAGE_peak_1_at_Pou4f2_5end | |||
|id=chr8:80960539..80960548,- | |||
|ontology_enrichment_celltype=CL:0000120!8.72e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,1.78e-21,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!4.35e-16!9;UBERON:0000019!4.35e-16!9;UBERON:0000047!4.35e-16!9;UBERON:0004088!4.35e-16!9;UBERON:0002104!4.35e-16!9;UBERON:0001456!4.35e-16!9;UBERON:0003072!4.35e-16!9;UBERON:0003071!4.35e-16!9;UBERON:0004128!4.35e-16!9;UBERON:0000020!3.92e-14!12;UBERON:0001032!3.92e-14!12;UBERON:0004456!3.92e-14!12;UBERON:0005085!7.58e-13!13;UBERON:0001444!9.40e-13!11;UBERON:0001948!4.48e-08!5;UBERON:0002315!4.48e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.26e-36,9;UBERON:0000019,1.26e-36,9;UBERON:0000047,1.26e-36,9;UBERON:0010312,1.26e-36,9;UBERON:0004088,1.26e-36,9;UBERON:0002104,1.26e-36,9;UBERON:0001456,1.26e-36,9;UBERON:0003072,1.26e-36,9;UBERON:0004128,1.26e-36,9;UBERON:0003071,1.26e-36,9;UBERON:0001444,6.48e-30,11;UBERON:0000020,2.14e-27,12;UBERON:0001032,2.14e-27,12;UBERON:0004456,2.14e-27,12;UBERON:0000033,2.91e-25,13;UBERON:0005085,2.91e-25,13;UBERON:0004121,3.35e-09,95;UBERON:0000924,3.35e-09,95;UBERON:0006601,3.35e-09,95;UBERON:0007811,7.92e-09,36;UBERON:0003056,3.43e-08,49;UBERON:0002259,8.96e-08,1;UBERON:0002314,8.96e-08,1;UBERON:0004061,8.96e-08,1;UBERON:0006777,8.96e-08,1;UBERON:0005882,8.96e-08,1;UBERON:0002346,1.00e-07,64;UBERON:0003075,1.00e-07,64;UBERON:0007284,1.00e-07,64;UBERON:0000153,2.67e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47412674750713,7.40587370980846,5.07065122804943,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0,0,0,0.274462930807229,0,0,0,0,0.294628585473668,0.142371680799103,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0,0,0,0,0,0,0,0,0,0.210441855886474,6.8963834770233,14.7137346837423,14.2249082546226,3.31550599238573,1.76894897793452,0.896796041993948,1.40552586839593,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.243106717068294,1.25767897576789,0.735374033800057,0.222246727801615,0,0.320919209591815,0,0.760437899670719,0.377252682772152,0.187283014939765,0.384150914429216,0.287177344778066,0,0.811190281613988,0,0.824171801606613,0.735994600671987,0,0.532427418478012,0.476872379894642,0.436039249896986,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p1@Pou4f2 | |||
}} |
Revision as of 03:35, 4 August 2015
Short description: | p1@Pou4f2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pou4f2_5end |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | 2bp_to_ENSMUST00000034115, NM_138944, uc009mhy.1_5end |
EntrezGene: | 18997 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 1.78e-21 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 1.26e-36 | 9 |
camera-type eye | 1.26e-36 | 9 |
simple eye | 1.26e-36 | 9 |
immature eye | 1.26e-36 | 9 |
ocular region | 1.26e-36 | 9 |
visual system | 1.26e-36 | 9 |
face | 1.26e-36 | 9 |
optic cup | 1.26e-36 | 9 |
optic vesicle | 1.26e-36 | 9 |
eye primordium | 1.26e-36 | 9 |
subdivision of head | 6.48e-30 | 11 |
sense organ | 2.14e-27 | 12 |
sensory system | 2.14e-27 | 12 |
entire sense organ system | 2.14e-27 | 12 |
head | 2.91e-25 | 13 |
ectodermal placode | 2.91e-25 | 13 |
ectoderm-derived structure | 3.35e-09 | 95 |
ectoderm | 3.35e-09 | 95 |
presumptive ectoderm | 3.35e-09 | 95 |
craniocervical region | 7.92e-09 | 36 |
pre-chordal neural plate | 3.43e-08 | 49 |
corpora quadrigemina | 8.96e-08 | 1 |
midbrain tectum | 8.96e-08 | 1 |
neural tube mantle layer | 8.96e-08 | 1 |
tectal plate | 8.96e-08 | 1 |
neural tube alar plate | 8.96e-08 | 1 |
neurectoderm | 1.00e-07 | 64 |
neural plate | 1.00e-07 | 64 |
presumptive neural plate | 1.00e-07 | 64 |
anterior region of body | 2.67e-07 | 43 |