FFCP PHASE1:Mm9::chr8:77396591..77396639,+: Difference between revisions
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{{FFCP|EntrezGene=71597|HGNC=|MCL_coexpression_id=412|UniProt=A1A546|association_with_transcript=0bp_to_ENSMUST00000034034_5end|description=CAGE_peak_1_at_Isx_5end|id=chr8:77396591..77396639,+|ontology_enrichment_celltype=CL:0002563!6.10e-09!9;CL:0002251!6.10e-09!9|ontology_enrichment_celltype_v019_2=CL:0002563,7.21e-12,9;CL:0002251,7.21e-12,9;CL:0000239,1.05e-08,6;CL:0000677,1.05e-08,6;CL:0000584,1.05e-08,6;CL:0000075,2.76e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.74e-25!43;UBERON:0005409!3.77e-24!59;UBERON:0000344!2.67e-14!15;UBERON:0001242!2.18e-12!13;UBERON:0000060!2.18e-12!13;UBERON:0001262!2.18e-12!13;UBERON:0004786!2.18e-12!13;UBERON:0004923!1.97e-09!24;UBERON:0003350!6.10e-09!9;UBERON:0004808!6.10e-09!9;UBERON:0001277!6.10e-09!9;UBERON:0004119!6.52e-08!130;UBERON:0000925!6.52e-08!130;UBERON:0006595!6.52e-08!130;UBERON:0001007!8.28e-08!128;UBERON:0001555!8.28e-08!128;UBERON:0007026!8.28e-08!128;UBERON:0004921!7.18e-07!126;UBERON:0004185!7.18e-07!126;UBERON:0000485!9.63e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.70e-39,31;UBERON:0005409,1.93e-30,47;UBERON:0000344,2.36e-19,15;UBERON:0001242,1.11e-16,13;UBERON:0001262,1.11e-16,13;UBERON:0004786,1.11e-16,13;UBERON:0003350,7.21e-12,9;UBERON:0004808,7.21e-12,9;UBERON:0001277,7.21e-12,9;UBERON:0004923,2.76e-10,24;UBERON:0000485,2.87e-09,11;UBERON:0001007,2.86e-07,116;UBERON:0001555,2.86e-07,116;UBERON:0007026,2.86e-07,116;UBERON:0004119,5.65e-07,118;UBERON:0000925,5.65e-07,118;UBERON:0006595,5.65e-07,118|phase1_expression=0,67.7012290820361,35.4899406723838,35.6907769342059,31.5564309866199,52.2104535645977,44.6200143537454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.6369388085363,53.6817717697178,35.6023817751313,33.5994357004078,57.5308191271324,65.558079712449,26.9672238843126,28.8249663851896,0,0,0,31.1959749331377,34.0781022984909,30.0128953705683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,6.8510327831436,0,0,0,0,0,0.150722640552623,0,0.251333182659351,0.494389935468748,0.289198713839823,0,0,0,0,104.379386282148,0,0,66.1633772990252,0,0,0,0,0,0,0,0.255715457330331,0,0,0.305518091550949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351902248327898,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0,93.178096801431,64.7903888325684,9.59797127408553,20.2045904518582,38.9179733192722,48.2023623849789,52.2588403035445,42.0398633708756,36.0642086773829,32.4456940806301,26.138861715228,24.4716460610616,26.9050440224386,37.7504151634773,43.8760241245629,48.3913294008112,0,0,0,0,0,0,0,0,0,0,0,0,0.393117990226406,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,1.24645922567079,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,6.20227903603731,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0.220528398054962,0,0,0,0,0,42.5562021479582,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.813277868507395,4.32021363287205,1.46361807210128,3.05707589244649,1.34864346384821,0.247960367176008,0,56.6417433285135,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,1.45864030240976,0.419226325255965,2.38996560985018,1.55572709461131,2.67845574410562,2.24643446714271,1.76888048234658,2.78827229879264,1.50901073108861,2.99652823903624,1.72867911493147,3.0440798546475,2.38146845641537,1.73826488917283,1.92909220463705,0.824171801606613,2.50238164228475,1.71434626192708,1.95223386775271,1.43061713968393,3.19762116591123,2.07040636913727,1.77690676572521,2.37806364734604,4.47218509444333,2.71608227691724,2.80571135828869,1.89816028998679,2.1670986122624,1.22769312950907,2.94379998253335,1.54325288784913,0,2.8071793013449,1.93383948643468,0,0,0.231867835620421|short_description=p1@Isx}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71597 | |||
|HGNC= | |||
|MCL_coexpression_id=412 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A1A546 | |||
|association_with_transcript=0bp_to_ENSMUST00000034034_5end | |||
|cluster_id=chr8:77396591..77396639,+ | |||
|description=CAGE_peak_1_at_Isx_5end | |||
|id=chr8:77396591..77396639,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.10e-09!9;CL:0002251!6.10e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.21e-12,9;CL:0002251,7.21e-12,9;CL:0000239,1.05e-08,6;CL:0000677,1.05e-08,6;CL:0000584,1.05e-08,6;CL:0000075,2.76e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.74e-25!43;UBERON:0005409!3.77e-24!59;UBERON:0000344!2.67e-14!15;UBERON:0001242!2.18e-12!13;UBERON:0000060!2.18e-12!13;UBERON:0001262!2.18e-12!13;UBERON:0004786!2.18e-12!13;UBERON:0004923!1.97e-09!24;UBERON:0003350!6.10e-09!9;UBERON:0004808!6.10e-09!9;UBERON:0001277!6.10e-09!9;UBERON:0004119!6.52e-08!130;UBERON:0000925!6.52e-08!130;UBERON:0006595!6.52e-08!130;UBERON:0001007!8.28e-08!128;UBERON:0001555!8.28e-08!128;UBERON:0007026!8.28e-08!128;UBERON:0004921!7.18e-07!126;UBERON:0004185!7.18e-07!126;UBERON:0000485!9.63e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.70e-39,31;UBERON:0005409,1.93e-30,47;UBERON:0000344,2.36e-19,15;UBERON:0001242,1.11e-16,13;UBERON:0001262,1.11e-16,13;UBERON:0004786,1.11e-16,13;UBERON:0003350,7.21e-12,9;UBERON:0004808,7.21e-12,9;UBERON:0001277,7.21e-12,9;UBERON:0004923,2.76e-10,24;UBERON:0000485,2.87e-09,11;UBERON:0001007,2.86e-07,116;UBERON:0001555,2.86e-07,116;UBERON:0007026,2.86e-07,116;UBERON:0004119,5.65e-07,118;UBERON:0000925,5.65e-07,118;UBERON:0006595,5.65e-07,118 | |||
|phase1_expression=0,67.7012290820361,35.4899406723838,35.6907769342059,31.5564309866199,52.2104535645977,44.6200143537454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.6369388085363,53.6817717697178,35.6023817751313,33.5994357004078,57.5308191271324,65.558079712449,26.9672238843126,28.8249663851896,0,0,0,31.1959749331377,34.0781022984909,30.0128953705683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,6.8510327831436,0,0,0,0,0,0.150722640552623,0,0.251333182659351,0.494389935468748,0.289198713839823,0,0,0,0,104.379386282148,0,0,66.1633772990252,0,0,0,0,0,0,0,0.255715457330331,0,0,0.305518091550949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351902248327898,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0,93.178096801431,64.7903888325684,9.59797127408553,20.2045904518582,38.9179733192722,48.2023623849789,52.2588403035445,42.0398633708756,36.0642086773829,32.4456940806301,26.138861715228,24.4716460610616,26.9050440224386,37.7504151634773,43.8760241245629,48.3913294008112,0,0,0,0,0,0,0,0,0,0,0,0,0.393117990226406,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,1.24645922567079,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,6.20227903603731,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0.220528398054962,0,0,0,0,0,42.5562021479582,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.813277868507395,4.32021363287205,1.46361807210128,3.05707589244649,1.34864346384821,0.247960367176008,0,56.6417433285135,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,1.45864030240976,0.419226325255965,2.38996560985018,1.55572709461131,2.67845574410562,2.24643446714271,1.76888048234658,2.78827229879264,1.50901073108861,2.99652823903624,1.72867911493147,3.0440798546475,2.38146845641537,1.73826488917283,1.92909220463705,0.824171801606613,2.50238164228475,1.71434626192708,1.95223386775271,1.43061713968393,3.19762116591123,2.07040636913727,1.77690676572521,2.37806364734604,4.47218509444333,2.71608227691724,2.80571135828869,1.89816028998679,2.1670986122624,1.22769312950907,2.94379998253335,1.54325288784913,0,2.8071793013449,1.93383948643468,0,0,0.231867835620421 | |||
|short_description=p1@Isx | |||
}} |
Revision as of 03:01, 4 August 2015
Short description: | p1@Isx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Isx_5end |
Coexpression cluster: | MCL_coexpression_mm9:412 |
Association with transcript: | 0bp_to_ENSMUST00000034034_5end |
EntrezGene: | 71597 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.21e-12 | 9 |
epithelial cell of alimentary canal | 7.21e-12 | 9 |
brush border epithelial cell | 1.05e-08 | 6 |
gut absorptive cell | 1.05e-08 | 6 |
enterocyte | 1.05e-08 | 6 |
columnar/cuboidal epithelial cell | 2.76e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.70e-39 | 31 |
gastrointestinal system | 1.93e-30 | 47 |
mucosa | 2.36e-19 | 15 |
intestinal mucosa | 1.11e-16 | 13 |
wall of intestine | 1.11e-16 | 13 |
gastrointestinal system mucosa | 1.11e-16 | 13 |
epithelium of mucosa | 7.21e-12 | 9 |
gastrointestinal system epithelium | 7.21e-12 | 9 |
intestinal epithelium | 7.21e-12 | 9 |
organ component layer | 2.76e-10 | 24 |
simple columnar epithelium | 2.87e-09 | 11 |
digestive system | 2.86e-07 | 116 |
digestive tract | 2.86e-07 | 116 |
primitive gut | 2.86e-07 | 116 |
endoderm-derived structure | 5.65e-07 | 118 |
endoderm | 5.65e-07 | 118 |
presumptive endoderm | 5.65e-07 | 118 |