FFCP PHASE1:Mm9::chr2:132749211..132749216,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1993|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:132749211..132749216,-|id=chr2:132749211..132749216,-|ontology_enrichment_celltype=CL:0002563!1.85e-11!9;CL:0002251!1.85e-11!9;CL:0000239!2.02e-08!6;CL:0000677!2.02e-08!6;CL:0000212!2.02e-08!6;CL:0000584!2.02e-08!6;CL:0000075!5.53e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,5.37e-25,9;CL:0002251,5.37e-25,9;CL:0000239,8.55e-18,6;CL:0000677,8.55e-18,6;CL:0000584,8.55e-18,6;CL:0000066,9.35e-17,25;CL:0000075,3.83e-15,7;CL:0002076,2.68e-14,15;CL:0000223,1.43e-12,20;CL:0000682,3.46e-09,3;CL:0002250,8.75e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!6.95e-32!59;UBERON:0000160!1.39e-31!43;UBERON:0004119!1.63e-18!130;UBERON:0000925!1.63e-18!130;UBERON:0006595!1.63e-18!130;UBERON:0001007!2.61e-18!128;UBERON:0001555!2.61e-18!128;UBERON:0007026!2.61e-18!128;UBERON:0000344!7.42e-17!15;UBERON:0004921!7.86e-17!126;UBERON:0004185!7.86e-17!126;UBERON:0001242!5.80e-15!13;UBERON:0000060!5.80e-15!13;UBERON:0001262!5.80e-15!13;UBERON:0004786!5.80e-15!13;UBERON:0002108!7.73e-14!16;UBERON:0003350!1.85e-11!9;UBERON:0004808!1.85e-11!9;UBERON:0001277!1.85e-11!9;UBERON:0001045!2.31e-11!13;UBERON:0004923!7.77e-11!24;UBERON:0001264!2.07e-10!12;UBERON:0003922!2.07e-10!12;UBERON:0002114!2.07e-10!12;UBERON:0003923!2.07e-10!12;UBERON:0003924!2.07e-10!12;UBERON:0003921!2.07e-10!12;UBERON:0000485!7.90e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.63e-33,15;UBERON:0001242,5.19e-29,13;UBERON:0001262,5.19e-29,13;UBERON:0004786,5.19e-29,13;UBERON:0003350,5.37e-25,9;UBERON:0004808,5.37e-25,9;UBERON:0001277,5.37e-25,9;UBERON:0000160,8.44e-22,31;UBERON:0000485,3.91e-20,11;UBERON:0004923,9.11e-20,24;UBERON:0001264,9.95e-17,12;UBERON:0005409,8.82e-15,47;UBERON:0002075,5.72e-10,19|phase1_expression=0,9.77131141390211,7.27998783023258,5.14189159221611,5.00895729946347,4.70061961353291,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.91990907352088,1.37645568640302,2.29692785646008,3.87685796543167,3.01659725760245,0.570070258369122,1.26015064879965,1.33038306393183,0,0,0,2.59966457776147,1.32987716286794,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0,0,0.696710015581316,1.54640953586512,0.605050573870028,1.11189021922435,0.190225626112559,0,0.658795818896044,0.251335208800269,0.994782360205754,0.779856348476481,0,1.94524244887225,0.597423819763102,0,0.228497025219458,0,0.203651327845314,0,0.350679099451593,0.442655759869801,0.147610147979602,0.31399745568275,0.616985819609003,0,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0,0.339490171550376,0,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.989820737835213,2.65490276679926,0.485561272309963,0,2.45186603682668,2.06711325016541,1.22974059177571,0.258428293168221,2.18120237686503,3.92147116223193,1.26414703174326,2.10837217149998,3.09406629744561,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,1.45740418314925,0,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.418176592028937,0.218362563746178,0.404593039154462,0.41326727862668,0.523511883968059,1.42576470620972,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:132749211..132749216,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1993 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:132749211..132749216,- | |||
|description=CAGE_peak_at_chr2:132749211..132749216,- | |||
|id=chr2:132749211..132749216,- | |||
|ontology_enrichment_celltype=CL:0002563!1.85e-11!9;CL:0002251!1.85e-11!9;CL:0000239!2.02e-08!6;CL:0000677!2.02e-08!6;CL:0000212!2.02e-08!6;CL:0000584!2.02e-08!6;CL:0000075!5.53e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.37e-25,9;CL:0002251,5.37e-25,9;CL:0000239,8.55e-18,6;CL:0000677,8.55e-18,6;CL:0000584,8.55e-18,6;CL:0000066,9.35e-17,25;CL:0000075,3.83e-15,7;CL:0002076,2.68e-14,15;CL:0000223,1.43e-12,20;CL:0000682,3.46e-09,3;CL:0002250,8.75e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.95e-32!59;UBERON:0000160!1.39e-31!43;UBERON:0004119!1.63e-18!130;UBERON:0000925!1.63e-18!130;UBERON:0006595!1.63e-18!130;UBERON:0001007!2.61e-18!128;UBERON:0001555!2.61e-18!128;UBERON:0007026!2.61e-18!128;UBERON:0000344!7.42e-17!15;UBERON:0004921!7.86e-17!126;UBERON:0004185!7.86e-17!126;UBERON:0001242!5.80e-15!13;UBERON:0000060!5.80e-15!13;UBERON:0001262!5.80e-15!13;UBERON:0004786!5.80e-15!13;UBERON:0002108!7.73e-14!16;UBERON:0003350!1.85e-11!9;UBERON:0004808!1.85e-11!9;UBERON:0001277!1.85e-11!9;UBERON:0001045!2.31e-11!13;UBERON:0004923!7.77e-11!24;UBERON:0001264!2.07e-10!12;UBERON:0003922!2.07e-10!12;UBERON:0002114!2.07e-10!12;UBERON:0003923!2.07e-10!12;UBERON:0003924!2.07e-10!12;UBERON:0003921!2.07e-10!12;UBERON:0000485!7.90e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.63e-33,15;UBERON:0001242,5.19e-29,13;UBERON:0001262,5.19e-29,13;UBERON:0004786,5.19e-29,13;UBERON:0003350,5.37e-25,9;UBERON:0004808,5.37e-25,9;UBERON:0001277,5.37e-25,9;UBERON:0000160,8.44e-22,31;UBERON:0000485,3.91e-20,11;UBERON:0004923,9.11e-20,24;UBERON:0001264,9.95e-17,12;UBERON:0005409,8.82e-15,47;UBERON:0002075,5.72e-10,19 | |||
|phase1_expression=0,9.77131141390211,7.27998783023258,5.14189159221611,5.00895729946347,4.70061961353291,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.91990907352088,1.37645568640302,2.29692785646008,3.87685796543167,3.01659725760245,0.570070258369122,1.26015064879965,1.33038306393183,0,0,0,2.59966457776147,1.32987716286794,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0,0,0.696710015581316,1.54640953586512,0.605050573870028,1.11189021922435,0.190225626112559,0,0.658795818896044,0.251335208800269,0.994782360205754,0.779856348476481,0,1.94524244887225,0.597423819763102,0,0.228497025219458,0,0.203651327845314,0,0.350679099451593,0.442655759869801,0.147610147979602,0.31399745568275,0.616985819609003,0,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0,0.339490171550376,0,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.989820737835213,2.65490276679926,0.485561272309963,0,2.45186603682668,2.06711325016541,1.22974059177571,0.258428293168221,2.18120237686503,3.92147116223193,1.26414703174326,2.10837217149998,3.09406629744561,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,1.45740418314925,0,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.418176592028937,0.218362563746178,0.404593039154462,0.41326727862668,0.523511883968059,1.42576470620972,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:132749211..132749216,- | |||
}} |
Latest revision as of 02:57, 4 August 2015
Short description: | p@chr2:132749211..132749216, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:132749211..132749216, - |
Coexpression cluster: | MCL_coexpression_mm9:1993 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.37e-25 | 9 |
epithelial cell of alimentary canal | 5.37e-25 | 9 |
brush border epithelial cell | 8.55e-18 | 6 |
gut absorptive cell | 8.55e-18 | 6 |
enterocyte | 8.55e-18 | 6 |
epithelial cell | 9.35e-17 | 25 |
columnar/cuboidal epithelial cell | 3.83e-15 | 7 |
endo-epithelial cell | 2.68e-14 | 15 |
endodermal cell | 1.43e-12 | 20 |
M cell of gut | 3.46e-09 | 3 |
intestinal crypt stem cell | 8.75e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.63e-33 | 15 |
intestinal mucosa | 5.19e-29 | 13 |
wall of intestine | 5.19e-29 | 13 |
gastrointestinal system mucosa | 5.19e-29 | 13 |
epithelium of mucosa | 5.37e-25 | 9 |
gastrointestinal system epithelium | 5.37e-25 | 9 |
intestinal epithelium | 5.37e-25 | 9 |
intestine | 8.44e-22 | 31 |
simple columnar epithelium | 3.91e-20 | 11 |
organ component layer | 9.11e-20 | 24 |
pancreas | 9.95e-17 | 12 |
gastrointestinal system | 8.82e-15 | 47 |
viscus | 5.72e-10 | 19 |