FFCP PHASE1:Mm9::chr7:123602470..123602475,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=232|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:123602470..123602475,-|id=chr7:123602470..123602475,-|ontology_enrichment_celltype=CL:0000066!1.82e-24!25;CL:0002076!6.14e-24!15;CL:0002563!6.16e-24!9;CL:0002251!6.16e-24!9;CL:0000223!1.95e-20!20;CL:0000239!2.07e-16!6;CL:0000677!2.07e-16!6;CL:0000212!2.07e-16!6;CL:0000584!2.07e-16!6;CL:0000075!5.96e-14!7;CL:0000063!3.17e-10!66;CL:0002250!4.27e-09!3;CL:0000473!1.10e-08!3;CL:0000627!1.10e-08!3;CL:0000682!1.10e-08!3;CL:0000068!3.47e-08!3;CL:0002202!3.47e-08!3;CL:0000069!3.47e-08!3;CL:0002632!3.47e-08!3;CL:0002368!3.47e-08!3;CL:0000307!3.47e-08!3;CL:0000377!3.47e-08!3|ontology_enrichment_celltype_v019_2=CL:0000066,3.50e-46,25;CL:0002076,8.81e-44,15;CL:0002563,9.19e-43,9;CL:0002251,9.19e-43,9;CL:0000223,3.34e-38,20;CL:0000239,7.35e-29,6;CL:0000677,7.35e-29,6;CL:0000584,7.35e-29,6;CL:0000075,1.09e-24,7;CL:0002250,2.14e-15,3;CL:0000682,1.22e-14,3;CL:0000068,9.95e-14,3;CL:0002202,9.95e-14,3;CL:0000069,9.95e-14,3;CL:0002632,9.95e-14,3;CL:0002368,9.95e-14,3;CL:0000307,9.95e-14,3;CL:0000377,9.95e-14,3;CL:0000473,6.36e-11,7;CL:0002321,1.76e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001242!3.27e-27!13;UBERON:0000060!3.27e-27!13;UBERON:0001262!3.27e-27!13;UBERON:0004786!3.27e-27!13;UBERON:0000344!4.38e-27!15;UBERON:0003350!6.16e-24!9;UBERON:0004808!6.16e-24!9;UBERON:0001277!6.16e-24!9;UBERON:0000485!3.04e-19!11;UBERON:0004923!8.55e-16!24;UBERON:0000160!1.43e-11!43;UBERON:0005409!4.38e-11!59;UBERON:0003126!3.47e-08!3;UBERON:0001005!3.47e-08!3;UBERON:0007196!3.47e-08!3;UBERON:0001558!3.47e-08!3;UBERON:0001007!1.65e-07!128;UBERON:0001555!1.65e-07!128;UBERON:0007026!1.65e-07!128;UBERON:0004119!2.64e-07!130;UBERON:0000925!2.64e-07!130;UBERON:0006595!2.64e-07!130;UBERON:0004921!6.40e-07!126;UBERON:0004185!6.40e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0003350,9.19e-43,9;UBERON:0004808,9.19e-43,9;UBERON:0001277,9.19e-43,9;UBERON:0000485,8.68e-35,11;UBERON:0001242,2.92e-29,13;UBERON:0001262,2.92e-29,13;UBERON:0004786,2.92e-29,13;UBERON:0000344,3.32e-25,15;UBERON:0004923,2.68e-15,24;UBERON:0003126,9.95e-14,3;UBERON:0001005,9.95e-14,3;UBERON:0007196,9.95e-14,3;UBERON:0001558,9.95e-14,3;UBERON:0000160,1.47e-11,31;UBERON:0003929,2.10e-07,55;UBERON:0005409,3.49e-07,47|phase1_expression=0,8.02643437570531,9.55498402718026,10.5862473957391,9.01612313903425,4.02910252588535,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,4.59385571292016,2.58457197695445,2.37018355954478,0.190023419456374,0,0.221730510655305,0,0,0,17.3310971850765,3.65716219788683,8.5751129630195,0,0,0,1.76469446409304,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05810284182349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.87345025498471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr7:123602470..123602475,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:123602470..123602475,- | |||
|description=CAGE_peak_at_chr7:123602470..123602475,- | |||
|id=chr7:123602470..123602475,- | |||
|ontology_enrichment_celltype=CL:0000066!1.82e-24!25;CL:0002076!6.14e-24!15;CL:0002563!6.16e-24!9;CL:0002251!6.16e-24!9;CL:0000223!1.95e-20!20;CL:0000239!2.07e-16!6;CL:0000677!2.07e-16!6;CL:0000212!2.07e-16!6;CL:0000584!2.07e-16!6;CL:0000075!5.96e-14!7;CL:0000063!3.17e-10!66;CL:0002250!4.27e-09!3;CL:0000473!1.10e-08!3;CL:0000627!1.10e-08!3;CL:0000682!1.10e-08!3;CL:0000068!3.47e-08!3;CL:0002202!3.47e-08!3;CL:0000069!3.47e-08!3;CL:0002632!3.47e-08!3;CL:0002368!3.47e-08!3;CL:0000307!3.47e-08!3;CL:0000377!3.47e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.50e-46,25;CL:0002076,8.81e-44,15;CL:0002563,9.19e-43,9;CL:0002251,9.19e-43,9;CL:0000223,3.34e-38,20;CL:0000239,7.35e-29,6;CL:0000677,7.35e-29,6;CL:0000584,7.35e-29,6;CL:0000075,1.09e-24,7;CL:0002250,2.14e-15,3;CL:0000682,1.22e-14,3;CL:0000068,9.95e-14,3;CL:0002202,9.95e-14,3;CL:0000069,9.95e-14,3;CL:0002632,9.95e-14,3;CL:0002368,9.95e-14,3;CL:0000307,9.95e-14,3;CL:0000377,9.95e-14,3;CL:0000473,6.36e-11,7;CL:0002321,1.76e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!3.27e-27!13;UBERON:0000060!3.27e-27!13;UBERON:0001262!3.27e-27!13;UBERON:0004786!3.27e-27!13;UBERON:0000344!4.38e-27!15;UBERON:0003350!6.16e-24!9;UBERON:0004808!6.16e-24!9;UBERON:0001277!6.16e-24!9;UBERON:0000485!3.04e-19!11;UBERON:0004923!8.55e-16!24;UBERON:0000160!1.43e-11!43;UBERON:0005409!4.38e-11!59;UBERON:0003126!3.47e-08!3;UBERON:0001005!3.47e-08!3;UBERON:0007196!3.47e-08!3;UBERON:0001558!3.47e-08!3;UBERON:0001007!1.65e-07!128;UBERON:0001555!1.65e-07!128;UBERON:0007026!1.65e-07!128;UBERON:0004119!2.64e-07!130;UBERON:0000925!2.64e-07!130;UBERON:0006595!2.64e-07!130;UBERON:0004921!6.40e-07!126;UBERON:0004185!6.40e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,9.19e-43,9;UBERON:0004808,9.19e-43,9;UBERON:0001277,9.19e-43,9;UBERON:0000485,8.68e-35,11;UBERON:0001242,2.92e-29,13;UBERON:0001262,2.92e-29,13;UBERON:0004786,2.92e-29,13;UBERON:0000344,3.32e-25,15;UBERON:0004923,2.68e-15,24;UBERON:0003126,9.95e-14,3;UBERON:0001005,9.95e-14,3;UBERON:0007196,9.95e-14,3;UBERON:0001558,9.95e-14,3;UBERON:0000160,1.47e-11,31;UBERON:0003929,2.10e-07,55;UBERON:0005409,3.49e-07,47 | |||
|phase1_expression=0,8.02643437570531,9.55498402718026,10.5862473957391,9.01612313903425,4.02910252588535,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,4.59385571292016,2.58457197695445,2.37018355954478,0.190023419456374,0,0.221730510655305,0,0,0,17.3310971850765,3.65716219788683,8.5751129630195,0,0,0,1.76469446409304,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05810284182349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.87345025498471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr7:123602470..123602475,- | |||
}} |
Latest revision as of 02:40, 4 August 2015
Short description: | p@chr7:123602470..123602475, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:123602470..123602475, - |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.50e-46 | 25 |
endo-epithelial cell | 8.81e-44 | 15 |
intestinal epithelial cell | 9.19e-43 | 9 |
epithelial cell of alimentary canal | 9.19e-43 | 9 |
endodermal cell | 3.34e-38 | 20 |
brush border epithelial cell | 7.35e-29 | 6 |
gut absorptive cell | 7.35e-29 | 6 |
enterocyte | 7.35e-29 | 6 |
columnar/cuboidal epithelial cell | 1.09e-24 | 7 |
intestinal crypt stem cell | 2.14e-15 | 3 |
M cell of gut | 1.22e-14 | 3 |
duct epithelial cell | 9.95e-14 | 3 |
epithelial cell of tracheobronchial tree | 9.95e-14 | 3 |
branched duct epithelial cell | 9.95e-14 | 3 |
epithelial cell of lower respiratory tract | 9.95e-14 | 3 |
respiratory epithelial cell | 9.95e-14 | 3 |
tracheal epithelial cell | 9.95e-14 | 3 |
tracheoblast | 9.95e-14 | 3 |
defensive cell | 6.36e-11 | 7 |
embryonic cell | 1.76e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 9.19e-43 | 9 |
gastrointestinal system epithelium | 9.19e-43 | 9 |
intestinal epithelium | 9.19e-43 | 9 |
simple columnar epithelium | 8.68e-35 | 11 |
intestinal mucosa | 2.92e-29 | 13 |
wall of intestine | 2.92e-29 | 13 |
gastrointestinal system mucosa | 2.92e-29 | 13 |
mucosa | 3.32e-25 | 15 |
organ component layer | 2.68e-15 | 24 |
trachea | 9.95e-14 | 3 |
respiratory airway | 9.95e-14 | 3 |
tracheobronchial tree | 9.95e-14 | 3 |
lower respiratory tract | 9.95e-14 | 3 |
intestine | 1.47e-11 | 31 |
gut epithelium | 2.10e-07 | 55 |
gastrointestinal system | 3.49e-07 | 47 |