FFCP PHASE1:Mm9::chr14:123312330..123312412,-: Difference between revisions
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{{FFCP|EntrezGene=223267|HGNC=|MCL_coexpression_id=166|UniProt=Q923B0|association_with_transcript=0bp_to_ENSMUST00000038075,ENSMUST00000110679,NM_145466,uc007vbf.2,uc011zqm.1_5end|description=CAGE_peak_1_at_A2ld1_5end|id=chr14:123312330..123312412,-|ontology_enrichment_celltype=CL:0000066!7.06e-09!25;CL:0000223!1.74e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,7.06e-09,25;CL:0000223,1.74e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.73e-15!43;UBERON:0001007!1.68e-14!128;UBERON:0001555!1.68e-14!128;UBERON:0007026!1.68e-14!128;UBERON:0004119!1.46e-13!130;UBERON:0000925!1.46e-13!130;UBERON:0006595!1.46e-13!130;UBERON:0004921!1.65e-13!126;UBERON:0004185!1.65e-13!126;UBERON:0005409!3.96e-13!59;UBERON:0002365!4.89e-09!25;UBERON:0002330!4.89e-09!25;UBERON:0000344!8.47e-09!15;UBERON:0000481!9.12e-09!230;UBERON:0009854!2.84e-08!23;UBERON:0009856!2.84e-08!23;UBERON:0002107!6.54e-08!22;UBERON:0007499!6.54e-08!22;UBERON:0006925!6.54e-08!22;UBERON:0009497!6.54e-08!22;UBERON:0000015!6.54e-08!22;UBERON:0002423!6.54e-08!22;UBERON:0006235!6.54e-08!22;UBERON:0008835!6.54e-08!22;UBERON:0003894!6.54e-08!22;UBERON:0004161!6.54e-08!22;UBERON:0008836!6.54e-08!22;UBERON:0001242!1.14e-07!13;UBERON:0000060!1.14e-07!13;UBERON:0001262!1.14e-07!13;UBERON:0004786!1.14e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.91e-12,31;UBERON:0001007,4.69e-11,116;UBERON:0001555,4.69e-11,116;UBERON:0007026,4.69e-11,116;UBERON:0004119,3.16e-10,118;UBERON:0000925,3.16e-10,118;UBERON:0006595,3.16e-10,118;UBERON:0004921,3.49e-10,114;UBERON:0005409,7.71e-10,47;UBERON:0002365,4.89e-09,25;UBERON:0002330,4.89e-09,25;UBERON:0000344,8.47e-09,15;UBERON:0009854,2.84e-08,23;UBERON:0009856,2.84e-08,23;UBERON:0002107,6.54e-08,22;UBERON:0007499,6.54e-08,22;UBERON:0006925,6.54e-08,22;UBERON:0009497,6.54e-08,22;UBERON:0000015,6.54e-08,22;UBERON:0002423,6.54e-08,22;UBERON:0006235,6.54e-08,22;UBERON:0008835,6.54e-08,22;UBERON:0003894,6.54e-08,22;UBERON:0004161,6.54e-08,22;UBERON:0008836,6.54e-08,22;UBERON:0001242,1.14e-07,13;UBERON:0001262,1.14e-07,13;UBERON:0004786,1.14e-07,13;UBERON:0011216,9.36e-07,194|phase1_expression=20.979498970728,38.3872948403297,35.0349414329943,42.3449895829562,44.5797199652249,38.6122325397347,46.9561407597007,19.497621839678,2.53419699873,3.7450324211519,18.8339765048055,17.549874978974,33.5553430665163,28.7613123958501,12.3250611871795,12.755941845559,11.8925519281785,14.1957974411207,13.4372144933624,11.0341309467488,24.9176840142634,15.1915155337354,25.5975793356157,65.7568857680901,58.4993666721284,43.0673973086265,59.4451554699523,56.8844054290747,86.4606558526501,73.5927978898998,44.7895631523715,12.065582795733,12.916360539276,0,81.7450083896107,78.9614565452839,71.4592746918292,1.25559489221072,0,0.523523743973798,0,0.683045484958446,0.485510353031154,20.8988717839458,22.2015479370737,22.2091570115635,31.2956537739216,11.9913836009246,16.6961498878199,17.3042610176112,29.9570942278276,7.18762821824858,5.70460860596304,14.5072428402269,18.1490651536931,14.1492689819771,6.5902691185914,7.21940929188419,2.22548106945558,2.11596391708813,1.90149421051854,17.958760199664,30.2360230677787,13.0485459005803,13.8441290759376,14.9200824138681,19.7736072942147,25.3584081512226,0.829516898467821,0.675029691658453,1.68259969081106,10.5690864229407,13.4729809980484,0.61245399607477,1.34183659425531,0.919218786610021,24.2254938198655,23.8775322219301,28.2636021191488,1.71452174049252,2.47016637726506,2.08365348222704,41.3190838522044,30.9519435517424,32.5460267764606,7.95497180778903,8.25755748634797,4.84638559145781,8.85996461998253,7.02815508993105,13.0439019915755,104.111289114748,75.4768180415603,107.400935135926,102.014897539284,92.2935387420511,50.1386579870354,31.3591793543626,27.797102492507,31.8005617059306,13.9434985578914,30.7983545794363,7.64415719119937,21.3320010945999,23.1645413881999,22.0423082963336,22.2430755806505,49.3274360386339,21.7507822263624,15.8833088799362,4.8575891494518,10.0473607843007,14.0675453326196,15.0722640552623,18.1086608988985,14.5773245942424,58.0908174175779,14.3153363350713,7.96149496754887,6.14714029800155,8.17113618303456,8.24287930329878,39.1422698558057,60.3128441843787,33.7209197969663,64.8860920229822,5.51149572727233,7.19883277192089,3.68503658511888,31.0066623567983,18.3000241127451,2.26177833803156,22.5971616249959,12.2743419518559,26.3890816590641,18.0087802005211,13.4427960282417,10.8234064430781,35.1284634222808,21.2546274445339,5.46505860443356,6.43725892413724,7.92273371143537,6.17889753126432,8.43652589476465,8.58361925908494,9.46387418053261,16.298312356558,5.17363183038821,4.9167580843633,2.81521798662318,3.06874025398605,2.50242524303038,3.1342694986995,3.90986059175093,6.36909653819178,2.1066395619397,2.57347907114715,1.70498099637356,8.07790512888457,8.44293815931946,7.56260658136262,10.8902578369197,8.65762619688577,9.56456099901745,8.8362899005155,11.8040296615832,16.9309746432396,13.49390769290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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:223267 | |||
|HGNC= | |||
|MCL_coexpression_id=166 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q923B0 | |||
|association_with_transcript=0bp_to_ENSMUST00000038075,ENSMUST00000110679,NM_145466,uc007vbf.2,uc011zqm.1_5end | |||
|cluster_id=chr14:123312330..123312412,- | |||
|description=CAGE_peak_1_at_A2ld1_5end | |||
|id=chr14:123312330..123312412,- | |||
|ontology_enrichment_celltype=CL:0000066!7.06e-09!25;CL:0000223!1.74e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.06e-09,25;CL:0000223,1.74e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.73e-15!43;UBERON:0001007!1.68e-14!128;UBERON:0001555!1.68e-14!128;UBERON:0007026!1.68e-14!128;UBERON:0004119!1.46e-13!130;UBERON:0000925!1.46e-13!130;UBERON:0006595!1.46e-13!130;UBERON:0004921!1.65e-13!126;UBERON:0004185!1.65e-13!126;UBERON:0005409!3.96e-13!59;UBERON:0002365!4.89e-09!25;UBERON:0002330!4.89e-09!25;UBERON:0000344!8.47e-09!15;UBERON:0000481!9.12e-09!230;UBERON:0009854!2.84e-08!23;UBERON:0009856!2.84e-08!23;UBERON:0002107!6.54e-08!22;UBERON:0007499!6.54e-08!22;UBERON:0006925!6.54e-08!22;UBERON:0009497!6.54e-08!22;UBERON:0000015!6.54e-08!22;UBERON:0002423!6.54e-08!22;UBERON:0006235!6.54e-08!22;UBERON:0008835!6.54e-08!22;UBERON:0003894!6.54e-08!22;UBERON:0004161!6.54e-08!22;UBERON:0008836!6.54e-08!22;UBERON:0001242!1.14e-07!13;UBERON:0000060!1.14e-07!13;UBERON:0001262!1.14e-07!13;UBERON:0004786!1.14e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.91e-12,31;UBERON:0001007,4.69e-11,116;UBERON:0001555,4.69e-11,116;UBERON:0007026,4.69e-11,116;UBERON:0004119,3.16e-10,118;UBERON:0000925,3.16e-10,118;UBERON:0006595,3.16e-10,118;UBERON:0004921,3.49e-10,114;UBERON:0005409,7.71e-10,47;UBERON:0002365,4.89e-09,25;UBERON:0002330,4.89e-09,25;UBERON:0000344,8.47e-09,15;UBERON:0009854,2.84e-08,23;UBERON:0009856,2.84e-08,23;UBERON:0002107,6.54e-08,22;UBERON:0007499,6.54e-08,22;UBERON:0006925,6.54e-08,22;UBERON:0009497,6.54e-08,22;UBERON:0000015,6.54e-08,22;UBERON:0002423,6.54e-08,22;UBERON:0006235,6.54e-08,22;UBERON:0008835,6.54e-08,22;UBERON:0003894,6.54e-08,22;UBERON:0004161,6.54e-08,22;UBERON:0008836,6.54e-08,22;UBERON:0001242,1.14e-07,13;UBERON:0001262,1.14e-07,13;UBERON:0004786,1.14e-07,13;UBERON:0011216,9.36e-07,194 | |||
|phase1_expression=20.979498970728,38.3872948403297,35.0349414329943,42.3449895829562,44.5797199652249,38.6122325397347,46.9561407597007,19.497621839678,2.53419699873,3.7450324211519,18.8339765048055,17.549874978974,33.5553430665163,28.7613123958501,12.3250611871795,12.755941845559,11.8925519281785,14.1957974411207,13.4372144933624,11.0341309467488,24.9176840142634,15.1915155337354,25.5975793356157,65.7568857680901,58.4993666721284,43.0673973086265,59.4451554699523,56.8844054290747,86.4606558526501,73.5927978898998,44.7895631523715,12.065582795733,12.916360539276,0,81.7450083896107,78.9614565452839,71.4592746918292,1.25559489221072,0,0.523523743973798,0,0.683045484958446,0.485510353031154,20.8988717839458,22.2015479370737,22.2091570115635,31.2956537739216,11.9913836009246,16.6961498878199,17.3042610176112,29.9570942278276,7.18762821824858,5.70460860596304,14.5072428402269,18.1490651536931,14.1492689819771,6.5902691185914,7.21940929188419,2.22548106945558,2.11596391708813,1.90149421051854,17.958760199664,30.2360230677787,13.0485459005803,13.8441290759376,14.9200824138681,19.7736072942147,25.3584081512226,0.829516898467821,0.675029691658453,1.68259969081106,10.5690864229407,13.4729809980484,0.61245399607477,1.34183659425531,0.919218786610021,24.2254938198655,23.8775322219301,28.2636021191488,1.71452174049252,2.47016637726506,2.08365348222704,41.3190838522044,30.9519435517424,32.5460267764606,7.95497180778903,8.25755748634797,4.84638559145781,8.85996461998253,7.02815508993105,13.0439019915755,104.111289114748,75.4768180415603,107.400935135926,102.014897539284,92.2935387420511,50.1386579870354,31.3591793543626,27.797102492507,31.8005617059306,13.9434985578914,30.7983545794363,7.64415719119937,21.3320010945999,23.1645413881999,22.0423082963336,22.2430755806505,49.3274360386339,21.7507822263624,15.8833088799362,4.8575891494518,10.0473607843007,14.0675453326196,15.0722640552623,18.1086608988985,14.5773245942424,58.0908174175779,14.3153363350713,7.96149496754887,6.14714029800155,8.17113618303456,8.24287930329878,39.1422698558057,60.3128441843787,33.7209197969663,64.8860920229822,5.51149572727233,7.19883277192089,3.68503658511888,31.0066623567983,18.3000241127451,2.26177833803156,22.5971616249959,12.2743419518559,26.3890816590641,18.0087802005211,13.4427960282417,10.8234064430781,35.1284634222808,21.2546274445339,5.46505860443356,6.43725892413724,7.92273371143537,6.17889753126432,8.43652589476465,8.58361925908494,9.46387418053261,16.298312356558,5.17363183038821,4.9167580843633,2.81521798662318,3.06874025398605,2.50242524303038,3.1342694986995,3.90986059175093,6.36909653819178,2.1066395619397,2.57347907114715,1.70498099637356,8.07790512888457,8.44293815931946,7.56260658136262,10.8902578369197,8.65762619688577,9.56456099901745,8.8362899005155,11.8040296615832,16.9309746432396,13.4939076929054,13.9542344467231,17.9162069096341,17.3977985036145,14.2707574939183,17.7152472763691,30.0714626446702,3.70456604565424,48.5715610986183,34.3785736662608,5.11891801284562,3.48355007790658,21.9074684247559,29.8491616442547,30.6881700505921,33.669935821923,46.0293189698176,63.4090975687442,45.9943432104493,44.3672932651766,43.6719555146829,46.7386092500195,49.495613421305,65.5174789006868,7.58671603812327,4.22719496655997,7.88954149711563,8.34970444165788,11.8311017172252,19.7081653891795,31.6815050992529,54.4681446044732,52.1235776433364,65.8940855342415,80.3386619406174,9.34332592010127,9.82794975566015,12.367416181167,15.8230894683032,12.3000351473733,19.0969388836065,39.4143708307611,42.6415646418343,54.3631598112401,97.7623804386011,81.4988675394022,88.3066614914206,81.5829775769171,102.794717948056,119.645993298115,16.4430339248278,4.16881105895066,7.33342393989116,5.60158783058121,6.10194645550105,9.38035041674168,10.7119638398706,15.6106918286239,14.9753386900881,12.6234873099802,10.5240147313941,10.8149787712387,10.5337838938196,13.3077133894991,10.5553898757491,8.15858525728064,51.6352486669988,46.0814366328903,37.4082874671555,33.0536956190013,9.67216177722385,15.1482556322624,13.566853434899,12.8844785617891,12.0637102730367,11.9484398976276,10.9171350300373,9.90767857760913,13.3587531552715,12.8592577480977,10.2774822266096,17.3513510867776,14.6198287764517,10.1497394090335,10.750539317336,12.2077890999676,37.1686387351896,11.6534705354391,15.7208249621671,30.7426280002114,29.825491180958,42.426050416262,33.5956781118688,49.4405872089407,40.997198514243,37.6083741943621,32.6797686582496,43.3169281642385,41.5336319019621,7.56256594931503,12.5477923269272,11.574199891706,20.2167866352192,17.658512942605,16.9485491220185,29.8375650132307,7.27482294997502,4.02480934641258,26.6839361646504,8.40919890001548,4.84393280087717,3.86002719540197,6.44610657616937,4.59594519286172,51.3006272468537,40.6081411403016,10.423123728669,6.3979929068599,7.03739204004904,9.04168593622517,11.2089266731241,8.69357058184786,13.9382312594961,11.47601909054,12.2997976685937,44.8695190467103,6.16855187483214,13.419084830372,16.2008011232702,22.16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| |||
|short_description=p1@A2ld1 | |||
}} |
Revision as of 01:03, 4 August 2015
Short description: | p1@A2ld1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_A2ld1_5end |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | 0bp_to_ENSMUST00000038075, ENSMUST00000110679, NM_145466, uc007vbf.2, uc011zqm.1_5end |
EntrezGene: | 223267 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.06e-09 | 25 |
endodermal cell | 1.74e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.91e-12 | 31 |
digestive system | 4.69e-11 | 116 |
digestive tract | 4.69e-11 | 116 |
primitive gut | 4.69e-11 | 116 |
endoderm-derived structure | 3.16e-10 | 118 |
endoderm | 3.16e-10 | 118 |
presumptive endoderm | 3.16e-10 | 118 |
subdivision of digestive tract | 3.49e-10 | 114 |
gastrointestinal system | 7.71e-10 | 47 |
exocrine gland | 4.89e-09 | 25 |
exocrine system | 4.89e-09 | 25 |
mucosa | 8.47e-09 | 15 |
digestive tract diverticulum | 2.84e-08 | 23 |
sac | 2.84e-08 | 23 |
liver | 6.54e-08 | 22 |
epithelial sac | 6.54e-08 | 22 |
digestive gland | 6.54e-08 | 22 |
epithelium of foregut-midgut junction | 6.54e-08 | 22 |
anatomical boundary | 6.54e-08 | 22 |
hepatobiliary system | 6.54e-08 | 22 |
foregut-midgut junction | 6.54e-08 | 22 |
hepatic diverticulum | 6.54e-08 | 22 |
liver primordium | 6.54e-08 | 22 |
septum transversum | 6.54e-08 | 22 |
liver bud | 6.54e-08 | 22 |
intestinal mucosa | 1.14e-07 | 13 |
wall of intestine | 1.14e-07 | 13 |
gastrointestinal system mucosa | 1.14e-07 | 13 |
organ system subdivision | 9.36e-07 | 194 |