FFCP PHASE1:Mm9::chr11:77319050..77319061,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:77319050..77319061,+|id=chr11:77319050..77319061,+|ontology_enrichment_celltype=CL:0000239!3.44e-09!6;CL:0000677!3.44e-09!6;CL:0000212!3.44e-09!6;CL:0000584!3.44e-09!6;CL:0000075!1.05e-07!7|ontology_enrichment_celltype_v019_2=CL:0000682,2.70e-10,3;CL:0000239,1.40e-09,6;CL:0000677,1.40e-09,6;CL:0000584,1.40e-09,6;CL:0000075,3.24e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.46e-21!43;UBERON:0005409!6.33e-16!59;UBERON:0000344!3.41e-12!15;UBERON:0004923!3.39e-10!24;UBERON:0001242!5.74e-10!13;UBERON:0000060!5.74e-10!13;UBERON:0001262!5.74e-10!13;UBERON:0004786!5.74e-10!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.96e-45,31;UBERON:0005409,2.93e-28,47;UBERON:0000344,2.84e-13,15;UBERON:0001242,5.15e-12,13;UBERON:0001262,5.15e-12,13;UBERON:0004786,5.15e-12,13;UBERON:0001007,3.95e-10,116;UBERON:0001555,3.95e-10,116;UBERON:0007026,3.95e-10,116;UBERON:0004119,6.93e-10,118;UBERON:0000925,6.93e-10,118;UBERON:0006595,6.93e-10,118;UBERON:0004923,8.10e-10,24;UBERON:0004921,3.03e-09,114;UBERON:0002108,9.72e-08,4|phase1_expression=0,3.14077866875425,3.63999391511629,4.83942738090928,3.50627010962443,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.639969691173627,1.83527424853736,1.72269589234506,2.15380998079537,2.80112602491656,1.33016393619462,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,9.25172592354634,4.7601101999438,0,0.232236671860439,0.128867461322093,1.4117846723634,2.2237804384487,3.99473814836374,5.21981967698963,3.45867804920423,2.5133520880027,4.77495532898762,1.9496408711912,3.59527763461689,1.72910439899755,2.19055400579804,0,0.114248512609729,0,0.203651327845314,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,1.01391719956096,0,0,0,0.229741875822453,0.476293691283074,0.115884325944855,0,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p@chr11:77319050..77319061,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:77319050..77319061,+ | |||
|description=CAGE_peak_at_chr11:77319050..77319061,+ | |||
|id=chr11:77319050..77319061,+ | |||
|ontology_enrichment_celltype=CL:0000239!3.44e-09!6;CL:0000677!3.44e-09!6;CL:0000212!3.44e-09!6;CL:0000584!3.44e-09!6;CL:0000075!1.05e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.70e-10,3;CL:0000239,1.40e-09,6;CL:0000677,1.40e-09,6;CL:0000584,1.40e-09,6;CL:0000075,3.24e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.46e-21!43;UBERON:0005409!6.33e-16!59;UBERON:0000344!3.41e-12!15;UBERON:0004923!3.39e-10!24;UBERON:0001242!5.74e-10!13;UBERON:0000060!5.74e-10!13;UBERON:0001262!5.74e-10!13;UBERON:0004786!5.74e-10!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.96e-45,31;UBERON:0005409,2.93e-28,47;UBERON:0000344,2.84e-13,15;UBERON:0001242,5.15e-12,13;UBERON:0001262,5.15e-12,13;UBERON:0004786,5.15e-12,13;UBERON:0001007,3.95e-10,116;UBERON:0001555,3.95e-10,116;UBERON:0007026,3.95e-10,116;UBERON:0004119,6.93e-10,118;UBERON:0000925,6.93e-10,118;UBERON:0006595,6.93e-10,118;UBERON:0004923,8.10e-10,24;UBERON:0004921,3.03e-09,114;UBERON:0002108,9.72e-08,4 | |||
|phase1_expression=0,3.14077866875425,3.63999391511629,4.83942738090928,3.50627010962443,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.639969691173627,1.83527424853736,1.72269589234506,2.15380998079537,2.80112602491656,1.33016393619462,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,9.25172592354634,4.7601101999438,0,0.232236671860439,0.128867461322093,1.4117846723634,2.2237804384487,3.99473814836374,5.21981967698963,3.45867804920423,2.5133520880027,4.77495532898762,1.9496408711912,3.59527763461689,1.72910439899755,2.19055400579804,0,0.114248512609729,0,0.203651327845314,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,1.01391719956096,0,0,0,0.229741875822453,0.476293691283074,0.115884325944855,0,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:77319050..77319061,+ | |||
}} |
Latest revision as of 00:52, 4 August 2015
Short description: | p@chr11:77319050..77319061, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:77319050..77319061, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.70e-10 | 3 |
brush border epithelial cell | 1.40e-09 | 6 |
gut absorptive cell | 1.40e-09 | 6 |
enterocyte | 1.40e-09 | 6 |
columnar/cuboidal epithelial cell | 3.24e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.96e-45 | 31 |
gastrointestinal system | 2.93e-28 | 47 |
mucosa | 2.84e-13 | 15 |
intestinal mucosa | 5.15e-12 | 13 |
wall of intestine | 5.15e-12 | 13 |
gastrointestinal system mucosa | 5.15e-12 | 13 |
digestive system | 3.95e-10 | 116 |
digestive tract | 3.95e-10 | 116 |
primitive gut | 3.95e-10 | 116 |
endoderm-derived structure | 6.93e-10 | 118 |
endoderm | 6.93e-10 | 118 |
presumptive endoderm | 6.93e-10 | 118 |
organ component layer | 8.10e-10 | 24 |
subdivision of digestive tract | 3.03e-09 | 114 |
small intestine | 9.72e-08 | 4 |