FFCP PHASE1:Mm9::chr10:126602369..126602383,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=14421|HGNC=|MCL_coexpression_id=1223|UniProt=Q8VDF0,Q3UN35|association_with_transcript=88bp_to_uc007hib.1,uc007hic.1,uc007hid.1_5end|description=CAGE_peak_5_at_B4galnt1_5end|id=chr10:126602369..126602383,+|ontology_enrichment_celltype=CL:0000063!6.28e-09!66;CL:0000791!1.34e-07!9;CL:0000789!1.34e-07!9;CL:0002420!1.34e-07!9;CL:0002419!1.34e-07!9;CL:0000790!1.34e-07!9;CL:0000838!3.50e-07!12;CL:0000624!6.22e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,4.83e-11,9;CL:0000789,4.83e-11,9;CL:0002420,4.83e-11,9;CL:0002419,4.83e-11,9;CL:0000790,4.83e-11,9;CL:0000624,5.31e-10,8;CL:0002563,1.65e-09,9;CL:0002251,1.65e-09,9;CL:0000838,3.04e-09,12;CL:0000066,1.33e-08,25;CL:0000084,1.85e-08,11;CL:0000827,1.85e-08,11;CL:0000542,2.90e-08,13;CL:0000051,2.90e-08,13;CL:0000893,7.97e-08,6;CL:0002489,7.97e-08,6;CL:0000898,7.97e-08,6;CL:0000809,7.97e-08,6;CL:0000810,7.97e-08,6;CL:0000895,7.97e-08,6;CL:0000808,7.97e-08,6;CL:0000894,7.97e-08,6;CL:0000806,7.97e-08,6;CL:0000807,7.97e-08,6;CL:0000805,7.97e-08,6;CL:0002425,7.97e-08,6;CL:0002436,7.97e-08,6;CL:0002427,7.97e-08,6;CL:0002428,7.97e-08,6;CL:0002429,7.97e-08,6;CL:0002433,7.97e-08,6;CL:0002431,7.97e-08,6;CL:0002432,7.97e-08,6;CL:0000223,2.32e-07,20;CL:0000239,2.44e-07,6;CL:0000677,2.44e-07,6;CL:0000584,2.44e-07,6;CL:0002031,7.20e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.94e-10!15;UBERON:0003929!7.99e-10!55;UBERON:0004119!8.85e-10!130;UBERON:0000925!8.85e-10!130;UBERON:0006595!8.85e-10!130;UBERON:0001007!2.09e-09!128;UBERON:0001555!2.09e-09!128;UBERON:0007026!2.09e-09!128;UBERON:0000064!7.13e-09!99;UBERON:0001242!9.27e-09!13;UBERON:0000060!9.27e-09!13;UBERON:0001262!9.27e-09!13;UBERON:0004786!9.27e-09!13;UBERON:0007023!1.23e-08!51;UBERON:0004921!1.36e-08!126;UBERON:0004185!1.36e-08!126;UBERON:0002405!1.97e-08!70;UBERON:0000490!3.18e-08!66;UBERON:0002193!4.83e-08!48;UBERON:0004923!5.68e-08!24;UBERON:0005911!3.29e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.94e-15,15;UBERON:0001242,7.38e-13,13;UBERON:0001262,7.38e-13,13;UBERON:0004786,7.38e-13,13;UBERON:0004119,1.31e-12,118;UBERON:0000925,1.31e-12,118;UBERON:0006595,1.31e-12,118;UBERON:0001007,1.77e-12,116;UBERON:0001555,1.77e-12,116;UBERON:0007026,1.77e-12,116;UBERON:0003929,2.27e-12,55;UBERON:0004921,2.92e-11,114;UBERON:0000160,3.25e-11,31;UBERON:0000490,6.10e-11,66;UBERON:0004923,2.35e-10,24;UBERON:0003350,1.65e-09,9;UBERON:0004808,1.65e-09,9;UBERON:0001277,1.65e-09,9;UBERON:0005911,1.69e-09,69;UBERON:0007023,1.74e-08,51;UBERON:0005409,6.08e-08,47;UBERON:0000485,2.87e-07,11;UBERON:0002193,9.93e-07,48;UBERON:0002405,9.93e-07,48|phase1_expression=0,10.8182376368202,11.3749809847384,6.95667686005709,3.00537437967808,7.72244650794693,5.60670337429262,19.2393751927949,6.19470377467334,7.72412936862578,8.90333434772626,9.33334260245436,18.4896788325702,16.6972968620285,0.999329285446988,1.01237633694913,0.699561878128147,7.72882305127682,6.99283611389268,4.66828616977833,0.595303031057488,0.496454756004426,0.261199789138935,4.95976510659561,6.42345986988076,6.31655160526522,7.75371593086335,6.67960821326256,3.80046838912748,6.04872311423834,6.43018480900384,0,0.61506478758457,0,2.59966457776147,2.49351968037739,3.26670970019791,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,2.89562681343828,1.62203089951223,2.38610777810186,1.56478268869608,0,0.878744730937887,0.194429899074283,0.139986421625363,0,3.18786951509699,8.70434570413613,8.06625117941913,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.599200221036809,0.384218305321555,0.103689612308478,0.135005938331691,0.420649922702764,1.71390590642282,0.441737081903227,0,0.287536413054709,0,0,0.766124028511126,0.921639199537461,0,0.182975287204819,0,0.837548997004143,0,0.45839474333043,0.294628585473668,1.28134512719193,0.931997229126503,0.075726193333184,0.0755715601067855,0,0.860423876981386,2.719885334831,1.07940638327563,2.59910566979068,2.24013443548668,1.68533304158102,0.170430322578058,0.259786004602869,0.35333957451034,0,0,2.54805239706646,0,0.865964164044856,0.760079596425296,0,1.59857431606684,4.91981978929626,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0.741584903203122,0,0,0,0.662524555381181,0.484875253135222,1.86391761218122,0.585561594023094,0.83778682725382,4.34276993854605,0.718890747035522,0,0.889491589511453,0.449371918214468,2.28750301409313,0.628271760564322,1.91206752211504,1.53429274398198,1.0389402227978,1.46017136760982,0,0.870848794270651,2.52722758433675,0.631325567659422,0.260240885925407,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.655912071918102,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.162137619091711,0,0,0,1.68231958851302,0.308713837137853,2.31293148088659,2.11560453330835,0.213288250535234,0,0.257734922644187,1.00841762311671,0.667134131534611,0.380451252225118,1.89811624617805,0.329397909448022,0.251335208800269,0.596869416123452,0.38992817423824,3.59527763461689,3.24207074812041,4.18196673834171,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.316182685621286,0.147610147979602,1.09899109488962,0.616985819609003,1.77871576252289,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.810676133875177,1.09824565275233,0,1.48856379067401,1.87222603868736,1.76805214562978,1.4351793081753,1.92977408545347,1.10851914099963,0,0,0,0,0,0,0.585400943573396,0.315270288212382,0.221464689648775,1.11618338060241,0.491589944147214,1.20879487306127,0.289298117163023,0,1.08781136763742,0.491764273019036,1.10374698521893,0.481651769963376,0.586058432961016,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,1.60660658210904,0.425820255624806,0,0,0.824850614862677,0,0,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,1.40803024838226,0.63549621259146,0.882113592219848,0.65954501176592,0.322928853391811,0.0603129249281559,0,0,4.08073171281791,1.29797711407357,1.19609616558497,0,0.185194527369712,0,1.91371918809435,0.686334519619568,1.35982743995084,1.11961161858926,0.967399816630967,1.90934123603023,0,0.406638934253697,0.108005340821801,0.418176592028937,0.655087691238533,0.539457385539283,0.578574190077352,0,4.66613903850454,0,2.81846469342095,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0.241584120826006,0.864090018773596,2.52808896502543,0.202725215290164,0.410843828659309,0.51968329191118,1.07416017400489,0.79472541912506,1.68273629327956,0.443068581523732,0.807731599585181,1.447929326445,1.00826185136841,1.65678397257579,2.40529604100824,1.75315353272353,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,1.31377732815827,1.64836461840539,1.50057865355346,1.00314420807073,1.6942555278512,0.920650473014354,0,1.20297227640581,0,0.755393897389701,2.02506750069542,3.15224842256954,0,2.5888015587591,0.103787347584177,0,0,0.243106717068294,0,0,0,0.412070114477788,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.188218760830661,0.25384382367503,0.182927972872773,0,0,0,0.593175090620871,0,0,0,0.385813221962283,0.249810577937946,0,0.429742108096597,0,0.441182838239031,0.231867835620421|short_description=p5@B4galnt1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14421 | |||
|HGNC= | |||
|MCL_coexpression_id=1223 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VDF0,uniprot:Q3UN35 | |||
|association_with_transcript=88bp_to_uc007hib.1,uc007hic.1,uc007hid.1_5end | |||
|cluster_id=chr10:126602369..126602383,+ | |||
|description=CAGE_peak_5_at_B4galnt1_5end | |||
|id=chr10:126602369..126602383,+ | |||
|ontology_enrichment_celltype=CL:0000063!6.28e-09!66;CL:0000791!1.34e-07!9;CL:0000789!1.34e-07!9;CL:0002420!1.34e-07!9;CL:0002419!1.34e-07!9;CL:0000790!1.34e-07!9;CL:0000838!3.50e-07!12;CL:0000624!6.22e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.83e-11,9;CL:0000789,4.83e-11,9;CL:0002420,4.83e-11,9;CL:0002419,4.83e-11,9;CL:0000790,4.83e-11,9;CL:0000624,5.31e-10,8;CL:0002563,1.65e-09,9;CL:0002251,1.65e-09,9;CL:0000838,3.04e-09,12;CL:0000066,1.33e-08,25;CL:0000084,1.85e-08,11;CL:0000827,1.85e-08,11;CL:0000542,2.90e-08,13;CL:0000051,2.90e-08,13;CL:0000893,7.97e-08,6;CL:0002489,7.97e-08,6;CL:0000898,7.97e-08,6;CL:0000809,7.97e-08,6;CL:0000810,7.97e-08,6;CL:0000895,7.97e-08,6;CL:0000808,7.97e-08,6;CL:0000894,7.97e-08,6;CL:0000806,7.97e-08,6;CL:0000807,7.97e-08,6;CL:0000805,7.97e-08,6;CL:0002425,7.97e-08,6;CL:0002436,7.97e-08,6;CL:0002427,7.97e-08,6;CL:0002428,7.97e-08,6;CL:0002429,7.97e-08,6;CL:0002433,7.97e-08,6;CL:0002431,7.97e-08,6;CL:0002432,7.97e-08,6;CL:0000223,2.32e-07,20;CL:0000239,2.44e-07,6;CL:0000677,2.44e-07,6;CL:0000584,2.44e-07,6;CL:0002031,7.20e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.94e-10!15;UBERON:0003929!7.99e-10!55;UBERON:0004119!8.85e-10!130;UBERON:0000925!8.85e-10!130;UBERON:0006595!8.85e-10!130;UBERON:0001007!2.09e-09!128;UBERON:0001555!2.09e-09!128;UBERON:0007026!2.09e-09!128;UBERON:0000064!7.13e-09!99;UBERON:0001242!9.27e-09!13;UBERON:0000060!9.27e-09!13;UBERON:0001262!9.27e-09!13;UBERON:0004786!9.27e-09!13;UBERON:0007023!1.23e-08!51;UBERON:0004921!1.36e-08!126;UBERON:0004185!1.36e-08!126;UBERON:0002405!1.97e-08!70;UBERON:0000490!3.18e-08!66;UBERON:0002193!4.83e-08!48;UBERON:0004923!5.68e-08!24;UBERON:0005911!3.29e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.94e-15,15;UBERON:0001242,7.38e-13,13;UBERON:0001262,7.38e-13,13;UBERON:0004786,7.38e-13,13;UBERON:0004119,1.31e-12,118;UBERON:0000925,1.31e-12,118;UBERON:0006595,1.31e-12,118;UBERON:0001007,1.77e-12,116;UBERON:0001555,1.77e-12,116;UBERON:0007026,1.77e-12,116;UBERON:0003929,2.27e-12,55;UBERON:0004921,2.92e-11,114;UBERON:0000160,3.25e-11,31;UBERON:0000490,6.10e-11,66;UBERON:0004923,2.35e-10,24;UBERON:0003350,1.65e-09,9;UBERON:0004808,1.65e-09,9;UBERON:0001277,1.65e-09,9;UBERON:0005911,1.69e-09,69;UBERON:0007023,1.74e-08,51;UBERON:0005409,6.08e-08,47;UBERON:0000485,2.87e-07,11;UBERON:0002193,9.93e-07,48;UBERON:0002405,9.93e-07,48 | |||
|phase1_expression=0,10.8182376368202,11.3749809847384,6.95667686005709,3.00537437967808,7.72244650794693,5.60670337429262,19.2393751927949,6.19470377467334,7.72412936862578,8.90333434772626,9.33334260245436,18.4896788325702,16.6972968620285,0.999329285446988,1.01237633694913,0.699561878128147,7.72882305127682,6.99283611389268,4.66828616977833,0.595303031057488,0.496454756004426,0.261199789138935,4.95976510659561,6.42345986988076,6.31655160526522,7.75371593086335,6.67960821326256,3.80046838912748,6.04872311423834,6.43018480900384,0,0.61506478758457,0,2.59966457776147,2.49351968037739,3.26670970019791,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,2.89562681343828,1.62203089951223,2.38610777810186,1.56478268869608,0,0.878744730937887,0.194429899074283,0.139986421625363,0,3.18786951509699,8.70434570413613,8.06625117941913,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.599200221036809,0.384218305321555,0.103689612308478,0.135005938331691,0.420649922702764,1.71390590642282,0.441737081903227,0,0.287536413054709,0,0,0.766124028511126,0.921639199537461,0,0.182975287204819,0,0.837548997004143,0,0.45839474333043,0.294628585473668,1.28134512719193,0.931997229126503,0.075726193333184,0.0755715601067855,0,0.860423876981386,2.719885334831,1.07940638327563,2.59910566979068,2.24013443548668,1.68533304158102,0.170430322578058,0.259786004602869,0.35333957451034,0,0,2.54805239706646,0,0.865964164044856,0.760079596425296,0,1.59857431606684,4.91981978929626,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0.741584903203122,0,0,0,0.662524555381181,0.484875253135222,1.86391761218122,0.585561594023094,0.83778682725382,4.34276993854605,0.718890747035522,0,0.889491589511453,0.449371918214468,2.28750301409313,0.628271760564322,1.91206752211504,1.53429274398198,1.0389402227978,1.46017136760982,0,0.870848794270651,2.52722758433675,0.631325567659422,0.260240885925407,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.655912071918102,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.162137619091711,0,0,0,1.68231958851302,0.308713837137853,2.31293148088659,2.11560453330835,0.213288250535234,0,0.257734922644187,1.00841762311671,0.667134131534611,0.380451252225118,1.89811624617805,0.329397909448022,0.251335208800269,0.596869416123452,0.38992817423824,3.59527763461689,3.24207074812041,4.18196673834171,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.316182685621286,0.147610147979602,1.09899109488962,0.616985819609003,1.77871576252289,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.810676133875177,1.09824565275233,0,1.48856379067401,1.87222603868736,1.76805214562978,1.4351793081753,1.92977408545347,1.10851914099963,0,0,0,0,0,0,0.585400943573396,0.315270288212382,0.221464689648775,1.11618338060241,0.491589944147214,1.20879487306127,0.289298117163023,0,1.08781136763742,0.491764273019036,1.10374698521893,0.481651769963376,0.586058432961016,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,1.60660658210904,0.425820255624806,0,0,0.824850614862677,0,0,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,1.40803024838226,0.63549621259146,0.882113592219848,0.65954501176592,0.322928853391811,0.0603129249281559,0,0,4.08073171281791,1.29797711407357,1.19609616558497,0,0.185194527369712,0,1.91371918809435,0.686334519619568,1.35982743995084,1.11961161858926,0.967399816630967,1.90934123603023,0,0.406638934253697,0.108005340821801,0.418176592028937,0.655087691238533,0.539457385539283,0.578574190077352,0,4.66613903850454,0,2.81846469342095,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0.241584120826006,0.864090018773596,2.52808896502543,0.202725215290164,0.410843828659309,0.51968329191118,1.07416017400489,0.79472541912506,1.68273629327956,0.443068581523732,0.807731599585181,1.447929326445,1.00826185136841,1.65678397257579,2.40529604100824,1.75315353272353,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,1.31377732815827,1.64836461840539,1.50057865355346,1.00314420807073,1.6942555278512,0.920650473014354,0,1.20297227640581,0,0.755393897389701,2.02506750069542,3.15224842256954,0,2.5888015587591,0.103787347584177,0,0,0.243106717068294,0,0,0,0.412070114477788,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.188218760830661,0.25384382367503,0.182927972872773,0,0,0,0.593175090620871,0,0,0,0.385813221962283,0.249810577937946,0,0.429742108096597,0,0.441182838239031,0.231867835620421 | |||
|short_description=p5@B4galnt1 | |||
}} |
Revision as of 00:46, 4 August 2015
Short description: | p5@B4galnt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_B4galnt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1223 |
Association with transcript: | 88bp_to_uc007hib.1, uc007hic.1, uc007hid.1_5end |
EntrezGene: | 14421 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa | 9.94e-15 | 15 |
intestinal mucosa | 7.38e-13 | 13 |
wall of intestine | 7.38e-13 | 13 |
gastrointestinal system mucosa | 7.38e-13 | 13 |
endoderm-derived structure | 1.31e-12 | 118 |
endoderm | 1.31e-12 | 118 |
presumptive endoderm | 1.31e-12 | 118 |
digestive system | 1.77e-12 | 116 |
digestive tract | 1.77e-12 | 116 |
primitive gut | 1.77e-12 | 116 |
gut epithelium | 2.27e-12 | 55 |
subdivision of digestive tract | 2.92e-11 | 114 |
intestine | 3.25e-11 | 31 |
unilaminar epithelium | 6.10e-11 | 66 |
organ component layer | 2.35e-10 | 24 |
epithelium of mucosa | 1.65e-09 | 9 |
gastrointestinal system epithelium | 1.65e-09 | 9 |
intestinal epithelium | 1.65e-09 | 9 |
endo-epithelium | 1.69e-09 | 69 |
adult organism | 1.74e-08 | 51 |
gastrointestinal system | 6.08e-08 | 47 |
simple columnar epithelium | 2.87e-07 | 11 |
hemolymphoid system | 9.93e-07 | 48 |
immune system | 9.93e-07 | 48 |