FFCP PHASE1:Mm9::chr7:111501842..111501908,-: Difference between revisions
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{{FFCP|EntrezGene=319236,675296|HGNC=|MCL_coexpression_id=542|UniProt=E9Q987,E9PV99,D3Z3L3|association_with_transcript=0bp_to_ENSMUST00000059037,ENSMUST00000098178,ENSMUST00000130139,NM_001146007,NM_175677,uc009iwb.2,uc009iwc.2_5end|description=CAGE_peak_1_at_LOC675296_5end,CAGE_peak_1_at_Trim12c_5end|id=chr7:111501842..111501908,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!2.62e-12!193;UBERON:0004120!2.62e-12!193;UBERON:0006603!2.62e-12!193;UBERON:0001007!5.74e-12!128;UBERON:0001555!5.74e-12!128;UBERON:0007026!5.74e-12!128;UBERON:0004119!1.09e-11!130;UBERON:0000925!1.09e-11!130;UBERON:0006595!1.09e-11!130;UBERON:0004921!3.89e-11!126;UBERON:0004185!3.89e-11!126;UBERON:0003104!2.78e-09!131;UBERON:0009142!2.78e-09!131;UBERON:0000490!1.35e-08!66;UBERON:0003081!3.53e-08!88;UBERON:0002193!3.22e-07!48;UBERON:0004177!3.36e-07!29;UBERON:0005911!7.07e-07!69;UBERON:0002405!8.00e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.20e-13,116;UBERON:0001555,1.20e-13,116;UBERON:0007026,1.20e-13,116;UBERON:0004119,2.61e-13,118;UBERON:0000925,2.61e-13,118;UBERON:0006595,2.61e-13,118;UBERON:0004921,9.43e-13,114;UBERON:0000926,1.24e-11,120;UBERON:0004120,1.24e-11,120;UBERON:0006603,1.24e-11,120;UBERON:0000490,1.17e-08,66;UBERON:0003081,1.04e-07,87;UBERON:0005409,1.29e-07,47;UBERON:0004177,2.83e-07,29;UBERON:0005057,2.83e-07,29;UBERON:0002193,3.67e-07,48;UBERON:0002405,3.67e-07,48;UBERON:0005911,6.26e-07,69;UBERON:0000077,7.73e-07,35;UBERON:0001041,9.80e-07,80|phase1_expression=4.64431656603902,15.3549179361319,19.1099680543605,15.1232105653415,13.5241847085514,6.71517087647559,8.1764424208434,23.8878148366916,1.54867594366833,3.04283884218592,4.45166717386313,4.14815226775749,22.7696970808504,25.9638595184422,8.32774404539157,12.3509913107794,6.29605690315332,26.8142840554502,27.0115434203305,17.8243653755173,7.39876624314307,7.74469419366905,6.52999472847338,16.9591968161011,14.2233754261645,16.0784949952206,15.5074318617267,14.6520438226405,20.9025761402011,15.1218077855958,10.4213340007993,1.27006134691926,0.61506478758457,0,2.88851619751275,3.65716219788683,1.83752420636132,50.2237956884289,25.0027310247616,48.6877081895632,46.4702875544501,48.4962294320496,49.0365456561465,15.2335149750449,12.4693625400003,8.25960384727567,0,0.218025156380447,0.439372365468944,1.36100929351998,0.419959264876088,0,15.268217151254,5.80289713609076,12.4354705682712,6.94600477297057,6.5902691185914,12.3761302146586,0,0,0,1.69422266034566,0.889294796111139,0.899899717281399,1.97773272513395,1.4209602298922,0.599200221036809,0.768436610643109,0.414758449233911,0.270011876663381,0.210324961351382,0.571301968807607,0.441737081903227,0.489963196859816,0.287536413054709,0,0,1.0214987046815,2.15049146558741,0,0.274462930807229,0.52091337055676,0.837548997004143,1.12552522006336,1.37518422999129,1.47314292736834,1.85083185038834,0.745597783301202,3.7863096666592,7.48158445057177,9.56552812715537,3.44169550792555,2.719885334831,7.01614149129162,7.79731700937203,6.72040330646003,11.0951091904084,9.88495870952735,7.01422212427746,5.65343319216544,6.33795388995062,14.115912515575,10.1922095882658,0,4.32982082022428,4.30711771307668,1.51657333504435,10.8474685733107,25.63485048107,7.57054909230606,1.73485326766136,4.87144765299426,6.22661842591358,11.6056433225519,10.8181610564848,10.4303270803631,9.14621380617183,7.80836527367523,8.84610551949874,5.17653919831709,5.52103796150984,5.33362778448744,1.86391761218122,1.46390398505774,1.04723353406728,11.4955674843866,2.51611761462433,1.19980546198682,3.81210681219194,1.49790639404823,1.37250180845588,1.00523481690292,0.869121600961382,1.53429274398198,1.0389402227978,0.973447578406546,6.21220119486929,14.1823946495506,9.85618757891331,9.6803253707778,1.69156575851515,1.14951052216736,1.26043490863744,4.82255417074288,2.38127747029647,3.45907044769094,1.96773621575431,3.88055056108524,1.07783996466421,3.59301552318857,2.63926686245923,2.41115305670332,3.33656699070717,2.43776516565517,5.76189981942242,5.7719937377363,1.40442637462647,1.80143534980301,2.27330799516474,3.52113813310353,6.0976775595085,5.76198596675248,4.02466050494857,3.54175617145327,5.86215028972037,5.11574678450897,4.29237442239391,4.32031766758527,3.78487654801005,6.07419617092652,7.21512404958116,7.01759939641595,6.58650345873152,8.72341721942416,2.3131894342054,2.36680608472354,21.1468021109631,7.40461586657924,5.75878276445132,5.34144345279009,3.35055399437443,3.22693639397348,5.55945109612176,7.98947629672748,11.8632265386128,5.92916237006439,14.3261069016154,10.1467800740987,10.9179888786707,13.4822911298133,17.5071820398502,17.3252907731299,0.189667900953082,2.85621281524322,0,2.03651327845314,5.62462212786115,3.08597607517402,7.20896523216533,6.19962621514329,7.22194148070324,4.19550357334122,5.63259991465583,2.00214126859313,1.37591296579242,2.47348323623339,1.82574109249653,2.65294875727659,2.03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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319236,entrezgene:675296 | |||
|HGNC= | |||
|MCL_coexpression_id=542 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q987,uniprot:E9PV99,uniprot:D3Z3L3 | |||
|association_with_transcript=0bp_to_ENSMUST00000059037,ENSMUST00000098178,ENSMUST00000130139,NM_001146007,NM_175677,uc009iwb.2,uc009iwc.2_5end | |||
|cluster_id=chr7:111501842..111501908,- | |||
|description=CAGE_peak_1_at_LOC675296_5end,CAGE_peak_1_at_Trim12c_5end | |||
|id=chr7:111501842..111501908,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.62e-12!193;UBERON:0004120!2.62e-12!193;UBERON:0006603!2.62e-12!193;UBERON:0001007!5.74e-12!128;UBERON:0001555!5.74e-12!128;UBERON:0007026!5.74e-12!128;UBERON:0004119!1.09e-11!130;UBERON:0000925!1.09e-11!130;UBERON:0006595!1.09e-11!130;UBERON:0004921!3.89e-11!126;UBERON:0004185!3.89e-11!126;UBERON:0003104!2.78e-09!131;UBERON:0009142!2.78e-09!131;UBERON:0000490!1.35e-08!66;UBERON:0003081!3.53e-08!88;UBERON:0002193!3.22e-07!48;UBERON:0004177!3.36e-07!29;UBERON:0005911!7.07e-07!69;UBERON:0002405!8.00e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.20e-13,116;UBERON:0001555,1.20e-13,116;UBERON:0007026,1.20e-13,116;UBERON:0004119,2.61e-13,118;UBERON:0000925,2.61e-13,118;UBERON:0006595,2.61e-13,118;UBERON:0004921,9.43e-13,114;UBERON:0000926,1.24e-11,120;UBERON:0004120,1.24e-11,120;UBERON:0006603,1.24e-11,120;UBERON:0000490,1.17e-08,66;UBERON:0003081,1.04e-07,87;UBERON:0005409,1.29e-07,47;UBERON:0004177,2.83e-07,29;UBERON:0005057,2.83e-07,29;UBERON:0002193,3.67e-07,48;UBERON:0002405,3.67e-07,48;UBERON:0005911,6.26e-07,69;UBERON:0000077,7.73e-07,35;UBERON:0001041,9.80e-07,80 | |||
|phase1_expression=4.64431656603902,15.3549179361319,19.1099680543605,15.1232105653415,13.5241847085514,6.71517087647559,8.1764424208434,23.8878148366916,1.54867594366833,3.04283884218592,4.45166717386313,4.14815226775749,22.7696970808504,25.9638595184422,8.32774404539157,12.3509913107794,6.29605690315332,26.8142840554502,27.0115434203305,17.8243653755173,7.39876624314307,7.74469419366905,6.52999472847338,16.9591968161011,14.2233754261645,16.0784949952206,15.5074318617267,14.6520438226405,20.9025761402011,15.1218077855958,10.4213340007993,1.27006134691926,0.61506478758457,0,2.88851619751275,3.65716219788683,1.83752420636132,50.2237956884289,25.0027310247616,48.6877081895632,46.4702875544501,48.4962294320496,49.0365456561465,15.2335149750449,12.4693625400003,8.25960384727567,0,0.218025156380447,0.439372365468944,1.36100929351998,0.419959264876088,0,15.268217151254,5.80289713609076,12.4354705682712,6.94600477297057,6.5902691185914,12.3761302146586,0,0,0,1.69422266034566,0.889294796111139,0.899899717281399,1.97773272513395,1.4209602298922,0.599200221036809,0.768436610643109,0.414758449233911,0.270011876663381,0.210324961351382,0.571301968807607,0.441737081903227,0.489963196859816,0.287536413054709,0,0,1.0214987046815,2.15049146558741,0,0.274462930807229,0.52091337055676,0.837548997004143,1.12552522006336,1.37518422999129,1.47314292736834,1.85083185038834,0.745597783301202,3.7863096666592,7.48158445057177,9.56552812715537,3.44169550792555,2.719885334831,7.01614149129162,7.79731700937203,6.72040330646003,11.0951091904084,9.88495870952735,7.01422212427746,5.65343319216544,6.33795388995062,14.115912515575,10.1922095882658,0,4.32982082022428,4.30711771307668,1.51657333504435,10.8474685733107,25.63485048107,7.57054909230606,1.73485326766136,4.87144765299426,6.22661842591358,11.6056433225519,10.8181610564848,10.4303270803631,9.14621380617183,7.80836527367523,8.84610551949874,5.17653919831709,5.52103796150984,5.33362778448744,1.86391761218122,1.46390398505774,1.04723353406728,11.4955674843866,2.51611761462433,1.19980546198682,3.81210681219194,1.49790639404823,1.37250180845588,1.00523481690292,0.869121600961382,1.53429274398198,1.0389402227978,0.973447578406546,6.21220119486929,14.1823946495506,9.85618757891331,9.6803253707778,1.69156575851515,1.14951052216736,1.26043490863744,4.82255417074288,2.38127747029647,3.45907044769094,1.96773621575431,3.88055056108524,1.07783996466421,3.59301552318857,2.63926686245923,2.41115305670332,3.33656699070717,2.43776516565517,5.76189981942242,5.7719937377363,1.40442637462647,1.80143534980301,2.27330799516474,3.52113813310353,6.0976775595085,5.76198596675248,4.02466050494857,3.54175617145327,5.86215028972037,5.11574678450897,4.29237442239391,4.32031766758527,3.78487654801005,6.07419617092652,7.21512404958116,7.01759939641595,6.58650345873152,8.72341721942416,2.3131894342054,2.36680608472354,21.1468021109631,7.40461586657924,5.75878276445132,5.34144345279009,3.35055399437443,3.22693639397348,5.55945109612176,7.98947629672748,11.8632265386128,5.92916237006439,14.3261069016154,10.1467800740987,10.9179888786707,13.4822911298133,17.5071820398502,17.3252907731299,0.189667900953082,2.85621281524322,0,2.03651327845314,5.62462212786115,3.08597607517402,7.20896523216533,6.19962621514329,7.22194148070324,4.19550357334122,5.63259991465583,2.00214126859313,1.37591296579242,2.47348323623339,1.82574109249653,2.65294875727659,2.03700681425136,5.4662266115654,5.18832725680113,6.04035109013779,12.9391385874619,13.3970741160661,7.48890415474945,5.30415643688935,9.32866550313943,5.78932225636041,12.5632169313291,1.51593129416388,1.79261474086228,2.20668611507745,2.81628297946203,5.3602002381381,5.71304738126433,6.63454402716516,7.25121662888479,13.2878813789265,12.118562417969,16.3863314715738,17.9592381140531,16.2006945611293,30.1582567878545,25.5635671394793,2.95058563811422,5.51873492609465,1.28440471990234,1.17211686592203,5.08198330667694,4.03953483526997,1.89304931649754,2.73307121007647,3.44677436372478,6.93009514062401,6.46116154838943,6.22768367735431,6.07216052512342,5.26060544240361,1.97643888973262,1.92792789853084,5.25178315270594,3.02711526234334,5.04949573996086,9.56826713240706,2.65490276679926,3.39892890616974,2.11626489875326,5.84675747243284,0.885905678642318,3.68922177532713,5.42699415653264,4.36240475373007,5.70395805415554,3.79244109522979,2.10837217149998,4.12542172992747,6.12791290356818,5.04171063287669,0.646793418913773,1.71469628025274,2.30542303734956,3.0322698992352,3.9491764944509,0.913394847343798,2.3467170806371,4.44847348814022,5.07215315526412,8.90385765883992,4.19807509409354,3.73940134554566,3.46179797609096,2.1338316966858,13.699599321603,2.03967832211561,12.1318325366475,4.33412422722767,12.222838806401,12.809055076319,15.1730592770338,14.1842467388044,5.09935289981566,6.01791244991729,4.56059913554598,4.77335309007557,2.21435195506795,4.67634774391752,4.64422965533745,3.55450103224597,6.11415178489297,4.5853877770839,6.11635572367486,5.75863072364865,13.0911123024711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| |||
|short_description=p1@LOC675296,p1@Trim12c | |||
}} |
Revision as of 23:36, 3 August 2015
Short description: | p1@LOC675296, p1@Trim12c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC675296_5end, CAGE_peak_1_at_Trim12c_5end |
Coexpression cluster: | MCL_coexpression_mm9:542 |
Association with transcript: | 0bp_to_ENSMUST00000059037, ENSMUST00000098178, ENSMUST00000130139, NM_001146007, NM_175677, uc009iwb.2, uc009iwc.2_5end |
EntrezGene: | 319236,675296 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 1.20e-13 | 116 |
digestive tract | 1.20e-13 | 116 |
primitive gut | 1.20e-13 | 116 |
endoderm-derived structure | 2.61e-13 | 118 |
endoderm | 2.61e-13 | 118 |
presumptive endoderm | 2.61e-13 | 118 |
subdivision of digestive tract | 9.43e-13 | 114 |
mesoderm | 1.24e-11 | 120 |
mesoderm-derived structure | 1.24e-11 | 120 |
presumptive mesoderm | 1.24e-11 | 120 |
unilaminar epithelium | 1.17e-08 | 66 |
lateral plate mesoderm | 1.04e-07 | 87 |
gastrointestinal system | 1.29e-07 | 47 |
hemopoietic organ | 2.83e-07 | 29 |
immune organ | 2.83e-07 | 29 |
hemolymphoid system | 3.67e-07 | 48 |
immune system | 3.67e-07 | 48 |
endo-epithelium | 6.26e-07 | 69 |
mixed endoderm/mesoderm-derived structure | 7.73e-07 | 35 |
foregut | 9.80e-07 | 80 |