FFCP PHASE1:Mm9::chr8:67653344..67653362,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=407795|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=73bp_to_NR_033217,uc009lvi.2_5end|description=CAGE_peak_2_at_BC030870_5end|id=chr8:67653344..67653362,-|ontology_enrichment_celltype=CL:0002563!1.25e-09!9;CL:0002251!1.25e-09!9;CL:0002076!2.22e-08!15;CL:0000239!5.47e-07!6;CL:0000677!5.47e-07!6;CL:0000212!5.47e-07!6;CL:0000584!5.47e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,1.35e-15,9;CL:0002251,1.35e-15,9;CL:0002076,2.08e-12,15;CL:0000066,3.49e-11,25;CL:0000239,5.16e-11,6;CL:0000677,5.16e-11,6;CL:0000584,5.16e-11,6;CL:0000075,2.59e-09,7;CL:0000223,1.11e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.05e-21!59;UBERON:0000160!4.99e-18!43;UBERON:0000344!5.97e-16!15;UBERON:0001242!6.10e-14!13;UBERON:0000060!6.10e-14!13;UBERON:0001262!6.10e-14!13;UBERON:0004786!6.10e-14!13;UBERON:0001007!6.09e-12!128;UBERON:0001555!6.09e-12!128;UBERON:0007026!6.09e-12!128;UBERON:0004119!1.77e-11!130;UBERON:0000925!1.77e-11!130;UBERON:0006595!1.77e-11!130;UBERON:0004921!1.01e-10!126;UBERON:0004185!1.01e-10!126;UBERON:0003350!1.25e-09!9;UBERON:0004808!1.25e-09!9;UBERON:0001277!1.25e-09!9;UBERON:0004923!7.24e-09!24;UBERON:0000485!2.34e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.04e-46,47;UBERON:0000160,6.17e-46,31;UBERON:0000344,1.28e-26,15;UBERON:0001242,4.14e-23,13;UBERON:0001262,4.14e-23,13;UBERON:0004786,4.14e-23,13;UBERON:0001007,7.23e-20,116;UBERON:0001555,7.23e-20,116;UBERON:0007026,7.23e-20,116;UBERON:0004119,2.36e-19,118;UBERON:0000925,2.36e-19,118;UBERON:0006595,2.36e-19,118;UBERON:0004921,1.06e-17,114;UBERON:0003350,1.35e-15,9;UBERON:0004808,1.35e-15,9;UBERON:0001277,1.35e-15,9;UBERON:0004923,4.51e-15,24;UBERON:0000485,2.12e-12,11;UBERON:0002108,9.60e-09,4;UBERON:0000331,4.33e-07,3;UBERON:0002116,4.33e-07,3;UBERON:0001204,4.33e-07,3;UBERON:0001168,4.33e-07,3|phase1_expression=0,4.88565570695105,6.82498859084304,5.14189159221611,3.00537437967808,10.2406355866253,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.11956809922418,6.8822784320151,5.7423196411502,8.61523992318149,6.24866574789078,15.771943814879,10.3332353201572,9.09095093686749,0,0,0,4.33277429626912,7.97926297720763,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,1.08245520505607,0.760079596425296,1.51657333504435,2.62622923353838,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,16.775258509631,0,0,8.68553987709211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,31.059365600477,6.34681359992506,0,0,1.28867461322093,2.21851877085677,4.00280478920767,4.75564065281398,11.8632265386128,3.78807595865225,1.75934646160189,5.37182474511107,2.33956904542944,8.98819408654222,15.1296634912286,11.7493351220077,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0.714130922658041,0.195133647857799,0,0.221464689648775,0.159454768657487,0.163863314715738,0.863424909329478,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,1.7642271844397,0,0,0,0,0,7.28702091574627,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0.158167996790568,0.813277868507395,1.29606408986162,1.88179466413022,1.09181281873089,1.61837215661785,1.23980183588004,5.49687478166462,7.2584385043404,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.915758121336325,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.962757628775446,0.252697211763798,0.50695859978048,0,0.187283014939765,0.256100609619477,0.287177344778066,0.476293691283074,0.347652977834566,0,0.412085900803307,0.147198920134397,1.02860775715625,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.526139422875686,0.543216455383447,1.12228454331548,0.474540072496697,0.0985044823755635,0.409231043169689,0.77468420592983,0,0,1.16965804222704,0.214871054048298,0,0.220591419119515,0|short_description=p2@BC030870}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:407795 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=73bp_to_NR_033217,uc009lvi.2_5end | |||
|cluster_id=chr8:67653344..67653362,- | |||
|description=CAGE_peak_2_at_BC030870_5end | |||
|id=chr8:67653344..67653362,- | |||
|ontology_enrichment_celltype=CL:0002563!1.25e-09!9;CL:0002251!1.25e-09!9;CL:0002076!2.22e-08!15;CL:0000239!5.47e-07!6;CL:0000677!5.47e-07!6;CL:0000212!5.47e-07!6;CL:0000584!5.47e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.35e-15,9;CL:0002251,1.35e-15,9;CL:0002076,2.08e-12,15;CL:0000066,3.49e-11,25;CL:0000239,5.16e-11,6;CL:0000677,5.16e-11,6;CL:0000584,5.16e-11,6;CL:0000075,2.59e-09,7;CL:0000223,1.11e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.05e-21!59;UBERON:0000160!4.99e-18!43;UBERON:0000344!5.97e-16!15;UBERON:0001242!6.10e-14!13;UBERON:0000060!6.10e-14!13;UBERON:0001262!6.10e-14!13;UBERON:0004786!6.10e-14!13;UBERON:0001007!6.09e-12!128;UBERON:0001555!6.09e-12!128;UBERON:0007026!6.09e-12!128;UBERON:0004119!1.77e-11!130;UBERON:0000925!1.77e-11!130;UBERON:0006595!1.77e-11!130;UBERON:0004921!1.01e-10!126;UBERON:0004185!1.01e-10!126;UBERON:0003350!1.25e-09!9;UBERON:0004808!1.25e-09!9;UBERON:0001277!1.25e-09!9;UBERON:0004923!7.24e-09!24;UBERON:0000485!2.34e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.04e-46,47;UBERON:0000160,6.17e-46,31;UBERON:0000344,1.28e-26,15;UBERON:0001242,4.14e-23,13;UBERON:0001262,4.14e-23,13;UBERON:0004786,4.14e-23,13;UBERON:0001007,7.23e-20,116;UBERON:0001555,7.23e-20,116;UBERON:0007026,7.23e-20,116;UBERON:0004119,2.36e-19,118;UBERON:0000925,2.36e-19,118;UBERON:0006595,2.36e-19,118;UBERON:0004921,1.06e-17,114;UBERON:0003350,1.35e-15,9;UBERON:0004808,1.35e-15,9;UBERON:0001277,1.35e-15,9;UBERON:0004923,4.51e-15,24;UBERON:0000485,2.12e-12,11;UBERON:0002108,9.60e-09,4;UBERON:0000331,4.33e-07,3;UBERON:0002116,4.33e-07,3;UBERON:0001204,4.33e-07,3;UBERON:0001168,4.33e-07,3 | |||
|phase1_expression=0,4.88565570695105,6.82498859084304,5.14189159221611,3.00537437967808,10.2406355866253,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.11956809922418,6.8822784320151,5.7423196411502,8.61523992318149,6.24866574789078,15.771943814879,10.3332353201572,9.09095093686749,0,0,0,4.33277429626912,7.97926297720763,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,1.08245520505607,0.760079596425296,1.51657333504435,2.62622923353838,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,16.775258509631,0,0,8.68553987709211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,31.059365600477,6.34681359992506,0,0,1.28867461322093,2.21851877085677,4.00280478920767,4.75564065281398,11.8632265386128,3.78807595865225,1.75934646160189,5.37182474511107,2.33956904542944,8.98819408654222,15.1296634912286,11.7493351220077,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0.714130922658041,0.195133647857799,0,0.221464689648775,0.159454768657487,0.163863314715738,0.863424909329478,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,1.7642271844397,0,0,0,0,0,7.28702091574627,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0.158167996790568,0.813277868507395,1.29606408986162,1.88179466413022,1.09181281873089,1.61837215661785,1.23980183588004,5.49687478166462,7.2584385043404,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.915758121336325,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.962757628775446,0.252697211763798,0.50695859978048,0,0.187283014939765,0.256100609619477,0.287177344778066,0.476293691283074,0.347652977834566,0,0.412085900803307,0.147198920134397,1.02860775715625,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.526139422875686,0.543216455383447,1.12228454331548,0.474540072496697,0.0985044823755635,0.409231043169689,0.77468420592983,0,0,1.16965804222704,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p2@BC030870 | |||
}} |
Revision as of 23:20, 3 August 2015
Short description: | p2@BC030870 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_BC030870_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 73bp_to_NR_033217, uc009lvi.2_5end |
EntrezGene: | 407795 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.35e-15 | 9 |
epithelial cell of alimentary canal | 1.35e-15 | 9 |
endo-epithelial cell | 2.08e-12 | 15 |
epithelial cell | 3.49e-11 | 25 |
brush border epithelial cell | 5.16e-11 | 6 |
gut absorptive cell | 5.16e-11 | 6 |
enterocyte | 5.16e-11 | 6 |
columnar/cuboidal epithelial cell | 2.59e-09 | 7 |
endodermal cell | 1.11e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.04e-46 | 47 |
intestine | 6.17e-46 | 31 |
mucosa | 1.28e-26 | 15 |
intestinal mucosa | 4.14e-23 | 13 |
wall of intestine | 4.14e-23 | 13 |
gastrointestinal system mucosa | 4.14e-23 | 13 |
digestive system | 7.23e-20 | 116 |
digestive tract | 7.23e-20 | 116 |
primitive gut | 7.23e-20 | 116 |
endoderm-derived structure | 2.36e-19 | 118 |
endoderm | 2.36e-19 | 118 |
presumptive endoderm | 2.36e-19 | 118 |
subdivision of digestive tract | 1.06e-17 | 114 |
epithelium of mucosa | 1.35e-15 | 9 |
gastrointestinal system epithelium | 1.35e-15 | 9 |
intestinal epithelium | 1.35e-15 | 9 |
organ component layer | 4.51e-15 | 24 |
simple columnar epithelium | 2.12e-12 | 11 |
small intestine | 9.60e-09 | 4 |
ileal mucosa | 4.33e-07 | 3 |
ileum | 4.33e-07 | 3 |
mucosa of small intestine | 4.33e-07 | 3 |
wall of small intestine | 4.33e-07 | 3 |