FFCP PHASE1:Hg19::chr7:142021271..142021284,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AF020656,AF325867,AF395795,AY611551,AY751843,AY751887,AY751915,EF592002,GQ502881,GQ502883,HM236508,HM236510,HM236512,HM236514,HM236515,HM236544,HM236615,HM236635,HM236642,HM236659,HM236662,HM236673,HM236674,HM236676,HM236718,HM236776,HM236777,HM236807,HM467843,HM467856,HM467875,HM467876,HM467877,HM467878,JF731146,JF731148,JF731150_5end | |association_with_transcript=0bp_to_AF020656,AF325867,AF395795,AY611551,AY751843,AY751887,AY751915,EF592002,GQ502881,GQ502883,HM236508,HM236510,HM236512,HM236514,HM236515,HM236544,HM236615,HM236635,HM236642,HM236659,HM236662,HM236673,HM236674,HM236676,HM236718,HM236776,HM236777,HM236807,HM467843,HM467856,HM467875,HM467876,HM467877,HM467878,JF731146,JF731148,JF731150_5end | ||
|cluster_id=chr7:142021271..142021284,+ | |||
|coexpression_cluster_id=C1137 | |coexpression_cluster_id=C1137 | ||
|description=CAGE_peak_1_at_AF020656_5end,CAGE_peak_1_at_AF325867_5end,CAGE_peak_1_at_AF395795_5end,CAGE_peak_1_at_AY611551_5end,CAGE_peak_1_at_AY751843_5end,CAGE_peak_1_at_AY751887_5end,CAGE_peak_1_at_AY751915_5end,CAGE_peak_1_at_EF592002_5end,CAGE_peak_1_at_GQ502881_5end,CAGE_peak_1_at_GQ502883_5end,CAGE_peak_1_at_HM236508_5end,CAGE_peak_1_at_HM236510_5end,CAGE_peak_1_at_HM236512_5end,CAGE_peak_1_at_HM236514_5end,CAGE_peak_1_at_HM236515_5end,CAGE_peak_1_at_HM236544_5end,CAGE_peak_1_at_HM236615_5end,CAGE_peak_1_at_HM236635_5end,CAGE_peak_1_at_HM236642_5end,CAGE_peak_1_at_HM236659_5end,CAGE_peak_1_at_HM236662_5end,CAGE_peak_1_at_HM236673_5end,CAGE_peak_1_at_HM236674_5end,CAGE_peak_1_at_HM236676_5end,CAGE_peak_1_at_HM236718_5end,CAGE_peak_1_at_HM236776_5end,CAGE_peak_1_at_HM236777_5end,CAGE_peak_1_at_HM236807_5end,CAGE_peak_1_at_HM467843_5end,CAGE_peak_1_at_HM467856_5end,CAGE_peak_1_at_HM467875_5end,CAGE_peak_1_at_HM467876_5end,CAGE_peak_1_at_HM467877_5end,CAGE_peak_1_at_HM467878_5end,CAGE_peak_1_at_JF731146_5end,CAGE_peak_1_at_JF731148_5end,CAGE_peak_1_at_JF731150_5end | |description=CAGE_peak_1_at_AF020656_5end,CAGE_peak_1_at_AF325867_5end,CAGE_peak_1_at_AF395795_5end,CAGE_peak_1_at_AY611551_5end,CAGE_peak_1_at_AY751843_5end,CAGE_peak_1_at_AY751887_5end,CAGE_peak_1_at_AY751915_5end,CAGE_peak_1_at_EF592002_5end,CAGE_peak_1_at_GQ502881_5end,CAGE_peak_1_at_GQ502883_5end,CAGE_peak_1_at_HM236508_5end,CAGE_peak_1_at_HM236510_5end,CAGE_peak_1_at_HM236512_5end,CAGE_peak_1_at_HM236514_5end,CAGE_peak_1_at_HM236515_5end,CAGE_peak_1_at_HM236544_5end,CAGE_peak_1_at_HM236615_5end,CAGE_peak_1_at_HM236635_5end,CAGE_peak_1_at_HM236642_5end,CAGE_peak_1_at_HM236659_5end,CAGE_peak_1_at_HM236662_5end,CAGE_peak_1_at_HM236673_5end,CAGE_peak_1_at_HM236674_5end,CAGE_peak_1_at_HM236676_5end,CAGE_peak_1_at_HM236718_5end,CAGE_peak_1_at_HM236776_5end,CAGE_peak_1_at_HM236777_5end,CAGE_peak_1_at_HM236807_5end,CAGE_peak_1_at_HM467843_5end,CAGE_peak_1_at_HM467856_5end,CAGE_peak_1_at_HM467875_5end,CAGE_peak_1_at_HM467876_5end,CAGE_peak_1_at_HM467877_5end,CAGE_peak_1_at_HM467878_5end,CAGE_peak_1_at_JF731146_5end,CAGE_peak_1_at_JF731148_5end,CAGE_peak_1_at_JF731150_5end | ||
Latest revision as of 06:51, 31 July 2015
| Short description: | p1@AF020656, p1@AF325867, p1@AF395795, p1@AY611551, p1@AY751843, p1@AY751887, p1@AY751915, p1@EF592002, p1@GQ502881, p1@GQ502883, p1@HM236508, p1@HM236510, p1@HM236512, p1@HM236514, p1@HM236515, p1@HM236544, p1@HM236615, p1@HM236635, p1@HM236642, p1@HM236659, p1@HM236662, p1@HM236673, p1@HM236674, p1@HM236676, p1@HM236718, p1@HM236776, p1@HM236777, p1@HM236807, p1@HM467843, p1@HM467856, p1@HM467875, p1@HM467876, p1@HM467877, p1@HM467878, p1@JF731146, p1@JF731148, p1@JF731150 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_AF020656_5end, CAGE_peak_1_at_AF325867_5end, CAGE_peak_1_at_AF395795_5end, CAGE_peak_1_at_AY611551_5end, CAGE_peak_1_at_AY751843_5end, CAGE_peak_1_at_AY751887_5end, CAGE_peak_1_at_AY751915_5end, CAGE_peak_1_at_EF592002_5end, CAGE_peak_1_at_GQ502881_5end, CAGE_peak_1_at_GQ502883_5end, CAGE_peak_1_at_HM236508_5end, CAGE_peak_1_at_HM236510_5end, CAGE_peak_1_at_HM236512_5end, CAGE_peak_1_at_HM236514_5end, CAGE_peak_1_at_HM236515_5end, CAGE_peak_1_at_HM236544_5end, CAGE_peak_1_at_HM236615_5end, CAGE_peak_1_at_HM236635_5end, CAGE_peak_1_at_HM236642_5end, CAGE_peak_1_at_HM236659_5end, CAGE_peak_1_at_HM236662_5end, CAGE_peak_1_at_HM236673_5end, CAGE_peak_1_at_HM236674_5end, CAGE_peak_1_at_HM236676_5end, CAGE_peak_1_at_HM236718_5end, CAGE_peak_1_at_HM236776_5end, CAGE_peak_1_at_HM236777_5end, CAGE_peak_1_at_HM236807_5end, CAGE_peak_1_at_HM467843_5end, CAGE_peak_1_at_HM467856_5end, CAGE_peak_1_at_HM467875_5end, CAGE_peak_1_at_HM467876_5end, CAGE_peak_1_at_HM467877_5end, CAGE_peak_1_at_HM467878_5end, CAGE_peak_1_at_JF731146_5end, CAGE_peak_1_at_JF731148_5end, CAGE_peak_1_at_JF731150_5end |
| Coexpression cluster: | C1137_CD4_CD8_thymus_Natural_blood_Whole_Peripheral |
| Association with transcript: | 0bp_to_AF020656, AF325867, AF395795, AY611551, AY751843, AY751887, AY751915, EF592002, GQ502881, GQ502883, HM236508, HM236510, HM236512, HM236514, HM236515, HM236544, HM236615, HM236635, HM236642, HM236659, HM236662, HM236673, HM236674, HM236676, HM236718, HM236776, HM236777, HM236807, HM467843, HM467856, HM467875, HM467876, HM467877, HM467878, JF731146, JF731148, JF731150_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| thymus | 1.18e-32 | 4 |
| hemolymphoid system gland | 1.18e-32 | 4 |
| thymic region | 1.18e-32 | 4 |
| pharyngeal gland | 1.18e-32 | 4 |
| thymus primordium | 1.18e-32 | 4 |
| pharyngeal epithelium | 5.03e-22 | 6 |
| hemopoietic organ | 5.57e-19 | 7 |
| immune organ | 5.57e-19 | 7 |
| neck | 1.75e-13 | 10 |
| gland of gut | 1.75e-13 | 10 |
| chordate pharynx | 1.75e-13 | 10 |
| pharyngeal region of foregut | 1.75e-13 | 10 |
| pharynx | 2.58e-12 | 11 |
| entire pharyngeal arch endoderm | 2.58e-12 | 11 |
| early pharyngeal endoderm | 2.58e-12 | 11 |
| pharyngeal arch system | 9.67e-08 | 18 |
| upper respiratory tract | 2.32e-07 | 19 |
